FFCP PHASE1:Hg19::chr4:89300072..89300089,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55008 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26072 | |||
|TSSclassifier=strong | |||
|UniProt=D6RCT4 | |||
|association_with_transcript=9bp_to_ENST00000504905_5end | |||
|coexpression_cluster_id=C678 | |||
|description=CAGE_peak_4_at_HERC6_5end | |||
|id=chr4:89300072..89300089,+ | |||
|ontology_enrichment_celltype=CL:0000839!2.38e-12!70;CL:0000557!2.42e-12!71;CL:0002194!5.26e-12!63;CL:0000576!5.26e-12!63;CL:0000040!5.26e-12!63;CL:0000559!5.26e-12!63;CL:0002009!4.86e-11!65;CL:0000766!1.52e-10!76;CL:0000860!7.64e-10!45;CL:0002057!8.10e-10!42;CL:0002087!1.94e-08!119;CL:0002031!9.29e-08!124 | |||
|ontology_enrichment_celltype_v019=CL:0000473;2.54e-14;39!CL:0000234;2.54e-14;39!CL:0000860;2.63e-14;33!CL:0002057;2.63e-14;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.26e-14,48;CL:0000234,1.26e-14,48;CL:0002194,2.71e-13,59;CL:0000576,2.71e-13,59;CL:0000040,2.71e-13,59;CL:0000559,2.71e-13,59;CL:0002009,1.10e-12,61;CL:0000557,1.83e-12,67;CL:0000860,4.51e-12,42;CL:0002057,4.51e-12,42;CL:0000839,2.49e-11,66;CL:0000766,5.86e-10,72;CL:0002087,3.64e-07,115 | |||
|ontology_enrichment_development_v019=CL:0002057;2.25e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.32e-12!80;UBERON:0001474!5.10e-11!86;UBERON:0002390!7.29e-11!102;UBERON:0003061!7.29e-11!102;UBERON:0002193!6.69e-10!112;UBERON:0004765!7.07e-10!101;UBERON:0001434!7.07e-10!101;UBERON:0002405!3.80e-08!115;UBERON:0007023!5.23e-08!115;UBERON:0001893!6.86e-07!34;UBERON:0001869!7.06e-07!32 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.44e-10,76;UBERON:0001434,4.40e-10,100;UBERON:0004765,6.61e-10,90;UBERON:0001474,3.42e-09,82;UBERON:0002390,1.18e-07,98;UBERON:0003061,1.18e-07,98;UBERON:0002405,1.71e-07,93 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0.125542639594803,0.229240217243854,0.0821005894499457,0,0,0,0.309632246632152,0,0.30120591877825,0.739508020333575,0,0,0.880801318004542,0,0.200544447470142,0.217010870715852,0.895661896959697,0.32389366601898,0,0.290796477559129,0.755751887377619,0.242584061187816,0.232429036905685,0.411167888021826,0,1.7261543539329,1.0246428261164,1.41889337933151,1.37898272294647,0,0,0.188242339542605,0,0.674170453335254,8.57034898638527,0.962787081228281,3.83602275479425,1.9791078011203,0.797854630486527,1.27867425159808,11.6083695451434,12.4824749432051,7.4738669879469,1.00499466102697,1.5644487552606,0.65156653411535,16.9511860737343,12.5214396235772,17.4054313092486,0,0,0.209658645508376,0.673971786878971,0.450530678524519,0.48217676009124,0.570025487482497,0.19891667719909,0.547992461293902,0,0,0,0.426730222566507,0,0,0.661044872784862,0.954053754535364,0.569212969109448,0,0,0,2.80254281490768,1.05353633910031,1.180258620683,1.96505381374582,0.205601498999509,0,0,0,1.94826728407911,0.668462741311041,0,0.443067789167242,0.541607727530031,0.768547918354051,0.520237390239513,0,0.552700035571697,0,0.14828656316206,0.267540828089713,0,0.339928028092699,0.383220493601921,0.68725489096526,1.01207876807801,0,0.651083453856419,0,0.752875595388864,0.127986611154418,0,1.4206635122641,1.64225599384209,0.403213486449465,0.802320587350522,0.144824403882799,0,0,0,0,0,0,0,0,0.283604451492204,0,0,0.130979075497713,0,0,0.649094787309367,1.0447784237956,0.531831842075461,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,1.61131726843659,0,0,0.367663080345869,0,0,0.22452937262617,0.225222960966644,0,0,0.183201743930407,0,0,0,0,0,0,0,0,1.12135520028461,0,0.98667019366864,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,1.18800285728205,0.989067717114227,0,0.718618141816238,0,0,0.277064115484183,0,0,1.05166641234618,0,0,0,0,0.300091096084402,0.206105058476878,0,0,0,0,0,0,0,0.355009592516614,0,0,0.773043412653187,1.36373060295417,0.573609190778008,0,0,0,0.207322110030741,0,0,0,0,0,0.464367928031979,0,0.236613600079688,0,0.482022059766964,0.220587945464788,0,0.474541238222193,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0.171567810298526,0.439001141634502,1.1240175325762,0.703702806881416,0.0925884451585296,0,0,0,0.231860809950154,0.352226082707465,0.721832238805369,0,0,0.790204397959275,0,0.738651018262192,1.17002132569619,0.594524649154913,0,2.51973192298289,1.84307626415102,0.268675568108545,0,0.383382679165211,0.492663237895943,0.704387472105808,0.207328115540772,0.432359860250884,0.12624243342638,0.063497894292169,0,0,0,0,0,0.285826432630578,0,0.43596006883328,0,0,0,0,0.26593811658487,0,0.257207374262142,0,0,0,0,0,0,0,0,0.301439377059586,0,0.299918973546171,1.2162378064119,0,2.10833939483032,0,1.14861935834114,0,0.289562613335158,0,0.358121926479791,0,0.591092280605782,0.646882724578552,0.128343036279748,0,0,0,0.167516265334349,0,0.749007023947182,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0.234282829985426,0,0,0,0,0,0.521301686808497,0,0.343143423810856,0.413536052245775,0.647142602455851,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0.177561725313127,0.164254312027618,1.03850885836724,0.464841513839837,0,0.200506470303285,0,0.114814448164607,0.182091168006717,0.262248829918848,0,0.15403067420883,0,0,0.105551628892876,0,0.170093705276516,0.431831832204279,0,0.270946437543853,0,0,0,0,0,0.261435451024901,0,0,0,0.309123034943167,0.457847324091717,0.082509499920588,1.14853107599234,0,0,0.096670718292122,0,0.307007349452259,0,0.107420244868274,0,0.0852266274161009,0,0.495854746082934,0.192190067365106,0.382838137483752,0,0,0.31481234683064,0,3.69640296211307,0,0,0,1.00187420719394,0,0,0.38126038784765,0,0,0,0,0,0,0,0.202182481573316,0,0,0,10.9671070334078,0,0.272999822815972,0.141405431953713,0,0,0,5.69986150829892,0,0.655894752046633,0,0,0,0,0,0,0,0.633322905892992,0,0,0,0.192444225451024,0,0,0.282431402330337,0,1.68471475667626,0.886860307073351,0.229723400206959,0,0,0,0.238231775457789,0.822724546172388,1.29694662238543,0,0,0,0,1.47024129588619,0.185803175125719,0,0,0.478278818186467,0,0.5745161103971,0.635020748171649,0.324621940274555,0.561594356226918,0.684704037099577,0,0,0,0.481764225311099,0,0.425846237690326,0.343505344755765,0.307240764308458,0.223676107892416,0.667396566847634,0.19538809540204,0,0,0,0,0,0.561421621224659,0.586032717087576,0.121360521749513,0,0.284136146806413,0,0,0,0.994147647766298,0.984685914873589,0.111308705022906,0.329607748453519,0,0.19924798825107,0.552567831062295,0,0,0,0,0.898683511473268,0.895105873378046,0,0,0,0,0.969332746095218,0.649376687132959,0,0,0.174919999992391,0.724999575434793,0.227586896570999,0.254253650292766,0,0,0,0,0.885741385813839,0.964771509003264,1.52581736317083,0,0,0.658156191461918,0,0.557694977114413,0.230850775511391,0.113942055847001,0,0,0,0.31900115973192,0.274792780205587,0,0,0,0.166211681900156,0,0,0,0,0.317873157960757,0.210998064528027,0,0.1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| |||
|short_description=p4@HERC6 | |||
}} |
Revision as of 02:13, 22 January 2014
Short description: | p4@HERC6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_HERC6_5end |
Coexpression cluster: | C678_Smooth_CD14_embryonic_mesothelioma_gall_Fibroblast_meningioma |
Association with transcript: | 9bp_to_ENST00000504905_5end |
EntrezGene: | HERC6 |
HGNC: | 26072 |
UniProt: | D6RCT4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.26e-14 | 48 |
phagocyte | 1.26e-14 | 48 |
monopoietic cell | 2.71e-13 | 59 |
monocyte | 2.71e-13 | 59 |
monoblast | 2.71e-13 | 59 |
promonocyte | 2.71e-13 | 59 |
macrophage dendritic cell progenitor | 1.10e-12 | 61 |
granulocyte monocyte progenitor cell | 1.83e-12 | 67 |
classical monocyte | 4.51e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.51e-12 | 42 |
myeloid lineage restricted progenitor cell | 2.49e-11 | 66 |
myeloid leukocyte | 5.86e-10 | 72 |
nongranular leukocyte | 3.64e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.44e-10 | 76 |
skeletal system | 4.40e-10 | 100 |
skeletal element | 6.61e-10 | 90 |
bone element | 3.42e-09 | 82 |
hematopoietic system | 1.18e-07 | 98 |
blood island | 1.18e-07 | 98 |
immune system | 1.71e-07 | 93 |