FFCP PHASE1:Hg19::chr4:56261764..56261833,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55858 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30760 | |||
|TSSclassifier=strong | |||
|UniProt=Q9HC07 | |||
|association_with_transcript=-256bp_to_NM_018475,uc003hax.2,uc011bzy.1_5end | |||
|coexpression_cluster_id=C2564 | |||
|description=CAGE_peak_3_at_TMEM165_5end | |||
|id=chr4:56261764..56261833,+ | |||
|ontology_enrichment_celltype=CL:0000037!2.96e-34!172;CL:0000566!2.96e-34!172;CL:0000763!2.09e-33!112;CL:0000049!2.09e-33!112;CL:0000988!2.08e-32!182;CL:0002032!4.20e-32!165;CL:0000837!4.20e-32!165;CL:0000766!3.22e-31!76;CL:0000738!4.30e-29!140;CL:0000557!8.85e-29!71;CL:0000839!1.27e-26!70;CL:0002057!2.81e-26!42;CL:0002009!8.84e-26!65;CL:0002194!4.58e-25!63;CL:0000576!4.58e-25!63;CL:0000040!4.58e-25!63;CL:0000559!4.58e-25!63;CL:0002031!8.09e-25!124;CL:0000860!2.41e-23!45;CL:0002087!2.85e-23!119;CL:0000134!8.70e-21!358;CL:0002320!1.98e-19!365;CL:0000048!1.41e-15!430;CL:0000219!2.24e-14!390;CL:0000723!7.61e-14!436;CL:0000034!2.32e-13!444 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.59e-21;33!CL:0002057;5.59e-21;33!CL:0000576;2.84e-18;48!CL:0000473;3.44e-17;39!CL:0000234;3.44e-17;39!CL:0000766;3.79e-16;69!CL:0000763;9.50e-12;100!CL:0002087;1.20e-07;104!CL:0000738;1.63e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.86e-36,108;CL:0000049,1.86e-36,108;CL:0000766,1.64e-35,72;CL:0000037,4.47e-35,168;CL:0000988,1.29e-33,177;CL:0002032,4.46e-33,161;CL:0000837,4.46e-33,161;CL:0000557,6.63e-33,67;CL:0000839,1.73e-30,66;CL:0000738,5.60e-30,136;CL:0002009,1.10e-29,61;CL:0002194,6.15e-29,59;CL:0000576,6.15e-29,59;CL:0000040,6.15e-29,59;CL:0000559,6.15e-29,59;CL:0000860,9.08e-28,42;CL:0002057,9.08e-28,42;CL:0000473,2.75e-27,48;CL:0000234,2.75e-27,48;CL:0002031,2.61e-26,120;CL:0002087,2.17e-24,115;CL:0000134,2.78e-20,354;CL:0002320,8.12e-19,361;CL:0000048,6.33e-14,427;CL:0000219,1.22e-13,386;CL:0000723,9.62e-13,433;CL:0000034,2.13e-12,441 | |||
|ontology_enrichment_development_v019=CL:0002057;2.22e-20;42!CL:0000049;7.64e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.03e-26!102;UBERON:0003061!1.03e-26!102;UBERON:0002371!1.07e-25!80;UBERON:0002193!5.43e-25!112;UBERON:0001474!9.51e-23!86;UBERON:0007023!1.02e-19!115;UBERON:0004765!3.30e-19!101;UBERON:0001434!3.30e-19!101;UBERON:0002384!7.40e-19!375;UBERON:0001049!1.36e-16!57;UBERON:0005068!1.36e-16!57;UBERON:0006241!1.36e-16!57;UBERON:0007135!1.36e-16!57;UBERON:0002405!1.71e-15!115;UBERON:0002616!3.56e-14!59;UBERON:0002780!4.88e-13!41;UBERON:0001890!4.88e-13!41;UBERON:0006240!4.88e-13!41;UBERON:0003080!5.04e-13!42;UBERON:0000955!5.18e-12!69;UBERON:0006238!5.18e-12!69;UBERON:0001017!5.23e-12!82;UBERON:0002020!2.09e-11!34;UBERON:0003528!2.09e-11!34;UBERON:0001893!2.38e-11!34;UBERON:0002791!6.88e-11!33;UBERON:0005743!1.72e-10!86;UBERON:0002204!2.10e-10!167;UBERON:0001869!3.27e-10!32;UBERON:0000073!1.26e-09!94;UBERON:0001016!1.26e-09!94;UBERON:0002619!1.05e-08!22;UBERON:0003075!7.61e-08!86;UBERON:0007284!7.61e-08!86;UBERON:0002346!1.11e-07!90;UBERON:0001950!1.11e-07!20;UBERON:0003081!2.14e-07!216;UBERON:0000956!6.89e-07!25;UBERON:0000203!6.89e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;6.56e-11;34!UBERON:0003528;1.21e-10;34!UBERON:0002020;1.21e-10;34!UBERON:0002780;2.49e-10;41!UBERON:0001890;2.49e-10;41!UBERON:0002791;3.81e-10;32!UBERON:0001869;4.75e-10;32!UBERON:0000073;8.66e-10;53!UBERON:0002616;8.66e-10;53!UBERON:0002619;1.31e-09;22!UBERON:0001950;1.69e-08;20!UBERON:0000956;1.17e-07;25!UBERON:0000203;1.17e-07;25!UBERON:0000125;5.70e-07;9!UBERON:0002308;5.70e-07;9 | |||
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|short_description=p3@TMEM165 | |||
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Revision as of 01:06, 22 January 2014
Short description: | p3@TMEM165 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TMEM165_5end |
Coexpression cluster: | C2564_optic_CD14_spinal_corpus_thalamus_substantia_locus |
Association with transcript: | -256bp_to_NM_018475, uc003hax.2, uc011bzy.1_5end |
EntrezGene: | TMEM165 |
HGNC: | 30760 |
UniProt: | Q9HC07 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.86e-36 | 108 |
common myeloid progenitor | 1.86e-36 | 108 |
myeloid leukocyte | 1.64e-35 | 72 |
hematopoietic stem cell | 4.47e-35 | 168 |
hematopoietic cell | 1.29e-33 | 177 |
hematopoietic oligopotent progenitor cell | 4.46e-33 | 161 |
hematopoietic multipotent progenitor cell | 4.46e-33 | 161 |
granulocyte monocyte progenitor cell | 6.63e-33 | 67 |
myeloid lineage restricted progenitor cell | 1.73e-30 | 66 |
leukocyte | 5.60e-30 | 136 |
macrophage dendritic cell progenitor | 1.10e-29 | 61 |
monopoietic cell | 6.15e-29 | 59 |
monocyte | 6.15e-29 | 59 |
monoblast | 6.15e-29 | 59 |
promonocyte | 6.15e-29 | 59 |
classical monocyte | 9.08e-28 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.08e-28 | 42 |
defensive cell | 2.75e-27 | 48 |
phagocyte | 2.75e-27 | 48 |
hematopoietic lineage restricted progenitor cell | 2.61e-26 | 120 |
nongranular leukocyte | 2.17e-24 | 115 |
mesenchymal cell | 2.78e-20 | 354 |
connective tissue cell | 8.12e-19 | 361 |
multi fate stem cell | 6.33e-14 | 427 |
motile cell | 1.22e-13 | 386 |
somatic stem cell | 9.62e-13 | 433 |
stem cell | 2.13e-12 | 441 |