FFCP PHASE1:Hg19::chr4:30722217..30722226,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5099 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8659 | |||
|TSSclassifier=strong | |||
|UniProt=O60245,F5GWJ1 | |||
|association_with_transcript=180bp_to_ENST00000361762,NM_001173523,NM_002589,NM_032457,uc003gsk.1,uc011bxw.1,uc011bxx.1_5end | |||
|description=CAGE_peak_4_at_PCDH7_5end | |||
|id=chr4:30722217..30722226,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000064;7.41e-17;3!CL:0000067;7.41e-17;3!CL:0005012;7.41e-17;3!CL:0002304;7.41e-17;3!CL:0000222;3.50e-07;1!CL:0000228;9.75e-07;1!CL:0000342;9.75e-07;1!CL:0002565;9.75e-07;1!CL:0002372;9.75e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,1.60e-17,3;CL:0000067,1.60e-17,3;CL:0005012,1.60e-17,3;CL:0002304,1.60e-17,3;CL:0000228,8.27e-07,1;CL:0002372,8.27e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000488;7.02e-22;4!UBERON:0001778;7.41e-17;3!UBERON:0001775;7.41e-17;3!UBERON:0002203;1.18e-14;6!UBERON:0001768;1.18e-14;6!UBERON:0002200;1.18e-14;6!UBERON:0001737;8.18e-10;9!UBERON:0001557;8.18e-10;9!UBERON:0007625;4.79e-08;11!UBERON:0006876;4.79e-08;11!UBERON:0002146;9.75e-07;1!UBERON:0004913;9.75e-07;1!UBERON:0003703;9.75e-07;1!UBERON:0005623;9.75e-07;1!UBERON:0002506;9.75e-07;1!UBERON:0001769;9.75e-07;1!UBERON:0001174;9.75e-07;1!UBERON:0004914;9.75e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000488,1.92e-22,4;UBERON:0001778,1.60e-17,3;UBERON:0001775,1.60e-17,3;UBERON:0002203,5.03e-15,6;UBERON:0001768,5.03e-15,6;UBERON:0002200,5.03e-15,6;UBERON:0001737,7.15e-10,9;UBERON:0007625,3.05e-08,11;UBERON:0006876,3.05e-08,11;UBERON:0004797,2.64e-07,7;UBERON:0004913,6.60e-07,1;UBERON:0003703,6.60e-07,1;UBERON:0001174,6.60e-07,1;UBERON:0004914,6.60e-07,1;UBERON:0002146,9.25e-07,1;UBERON:0005623,9.25e-07,1 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.281908808191942,2.00146596706261,0,0.872338524100369,0,0.631719873426831,0,1.96587149201207,0.697801167972428,0.436882744260345,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,1.41802225746102,1.77383517970051,1.93236528524877,0,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0.112611480483322,0,0,0,0,0,0,0,0.25326102332916,1.05927344650575,1.14734648299525,0,0,0,0,0,0,0.163461903113459,0.151357427644931,0.576175924479999,0,0,0,0.298897361103602,0.117434498643765,0.161872944368132,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0.300476117813194,0,0,0,0.211931901159562,0,0,0.257640540045629,0,0.506328996723799,0.0974370051611986,0,0.0920498986422993,0,0,0.10075209822764,0.169560592310488,0.773043412653187,0,0,0,0,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0,0.828147600278907,1.18009283054671,0.482022059766964,0.55146986366197,0,1.18635309555548,1.48314438976181,0.588664395376038,1.92373578473195,0,0,0,0,0,0,0,0,0,1.20097467208968,0.548751427043128,1.1240175325762,1.10581869652794,0.462942225792648,0,0,0,0.34779121492523,0.70445216541493,0,0,0,0,0.858486162094873,0,0,0,0,0.503946384596579,0.425325291727159,0.179117045405697,0,0,0,0,0,0.144119953416961,0,0.380987365753014,0.381988425558278,0,1.71072446022705,0.205654985406647,0.901029173531752,0,0,0,0,0.129271715757778,0,0,0.531876233169741,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0.355391948742546,0,2.41151501647669,0,0.499864955910285,0,0,0,0.479249710983165,0,1.42636905040718,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0.664225598535437,0.368738337083406,0,0,0,0,0,0,0,0,0.30239029332968,0,0.153461973288062,0.280660094433074,0.256278298511402,0.511707249066704,0.321707842287215,0,1.07946785661859,0.532685175939381,0.821271560138091,0.519254429183621,0.813472649219715,0.120859449591622,0.40101294060657,0.0920809889358963,0.229628896329213,0,0.131124414959424,0,0.15403067420883,0,0,0,0,0,0,0,0.541892875087706,0.501689773854853,0.254876273045038,0,0,0,0,0,0.328014645699706,0.325378394664303,0.103041011647722,0.732555718546747,1.07262349896764,0.574265537996172,0.650060246036521,0,0.773365746336976,0.308097234229289,0.15350367472613,0.275673144969061,0.214840489736547,0,0.511359764496605,1.51354460599453,0.991709492165869,1.34533047155574,3.31793052485919,0.6069466851333,0,1.5740617341532,0.6970372701606,0,0,0,0,0.286249773483982,0,0,0.38126038784765,0,0,1.27281299170375,0,0.179872457583315,0.54907405947211,0.471249609382746,0,0,0,0.48763373908959,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,1.00387946542836,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,1.72202149068492,0,0.443430153536676,0.918893600827838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561594356226918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.47748896947538,0,0,0,0,0.222617410045812,0,0,0.597743964753209,0,0,0,0,0,0,0,0,0.394573622547734,0,0,0,0.278304294485554,0,0,0,0,0.341380344856499,0.508507300585533,0.236387681767936,0,0,0.173624994933292,0,0,0,0,0,0.438770794307945,0,1.25481369850743,0.461701551022782,0.569710279235006,0,0,0,0.638002319463839,0.641183153813036,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0.593042257361244,0.617819694732514,0.417687798021821,0.067401132980677,0,0.702793337176017,0,0,0,0.394584402849391,0,0,0,0.150323419414493,0,0,0,0,0,0,0.554698692052555,0.694238953340524,0.293977192243133,0.261177619741208,0.52418000472609,0,0.0967563312890851,0.219267951258557,0,0,0,0,0,0,0.633107959558787,0,0,0,0.599428828746391,0,0,0,0,0,0.235694034616795,0.135904206073614,0,0,0.577901179803038,0,0,0,0.859530882839914,0,0,1.3749625440701,0,0.399358000997982,0.858452096273142,0,0.470284307407084,0.360299883542404,0,0,0,0,0.196854963029498,0,0,0.136203406111576,0,0,0,0,0,0.546746009922222,0,0.157611414598396,0.157363764404994,0,0.35857467866569,0.191915197319445,0,0,0,0.542999601753713,0,0.979762080328227,0,0,0.170388021785422,0,0,0,0.646414781807753,0.26446520348538,0,0,0.213574825135389,0.157204305099666,0,0,0,0,0,0,0,0,0,0,1.77213635993397,0.366078794705889,0.1251909307065,0,0.332787154610557,0.310482014706917,0,0.999843263696853,0,0,0,0,0,0.597019211547496,0.233713309847224,0,0,0.251567901752575,0,0.915360273587694,0.907385542579434,0.310874401165561,0,0,0.449803112163605,0.155262956876259,2.07353103920428,0.53168342911599,0.521745061811734,0.450772826991655,1.14241563650639,0,0.181848659202559,0.214821114084977,0,0.398095888698616,0.800055529326307,0.343395705182793,0.336749488765919,2.52369796457302,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0.737318726261158,0,0,0,0,1.70254786070051,0,0.139879507719444,0.622077260032973,0,0,0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| |||
|short_description=p4@PCDH7 | |||
}} |
Revision as of 00:37, 22 January 2014
Short description: | p4@PCDH7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PCDH7_5end |
Coexpression cluster: | NA |
Association with transcript: | 180bp_to_ENST00000361762, NM_001173523, NM_002589, NM_032457, uc003gsk.1, uc011bxw.1, uc011bxx.1_5end |
EntrezGene: | PCDH7 |
HGNC: | 8659 |
UniProt: | O60245F5GWJ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 1.60e-17 | 3 |
ciliated epithelial cell | 1.60e-17 | 3 |
multi-ciliated epithelial cell | 1.60e-17 | 3 |
non-pigmented ciliary epithelial cell | 1.60e-17 | 3 |
multinucleate cell | 8.27e-07 | 1 |
myotube | 8.27e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
atypical epithelium | 1.92e-22 | 4 |
ciliary epithelium | 1.60e-17 | 3 |
ciliary body | 1.60e-17 | 3 |
vasculature of eye | 5.03e-15 | 6 |
uvea | 5.03e-15 | 6 |
vasculature of head | 5.03e-15 | 6 |
larynx | 7.15e-10 | 9 |
pigment epithelium of eye | 3.05e-08 | 11 |
vasculature of organ | 3.05e-08 | 11 |
blood vessel layer | 2.64e-07 | 7 |
hepatopancreatic ampulla | 6.60e-07 | 1 |
extrahepatic bile duct | 6.60e-07 | 1 |
common bile duct | 6.60e-07 | 1 |
duodenal papilla | 6.60e-07 | 1 |
pulmonary valve | 9.25e-07 | 1 |
semi-lunar valve | 9.25e-07 | 1 |