FFCP PHASE1:Hg19::chr4:15938120..15938127,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=130bp_to_AB464521_5end | |||
|coexpression_cluster_id=C4386 | |||
|description=CAGE_peak_5_at_AB464521_5end | |||
|id=chr4:15938120..15938127,- | |||
|ontology_enrichment_celltype=CL:0002076!4.03e-27!43;CL:0002202!4.43e-26!9;CL:0002632!4.43e-26!9;CL:0002328!9.68e-21!3;CL:0000068!2.14e-20!3;CL:0000069!2.14e-20!3;CL:0000307!2.14e-20!3;CL:0000377!2.14e-20!3;CL:0002621!2.97e-20!3;CL:0000223!5.17e-19!59;CL:0002368!6.59e-18!13;CL:0002159!1.28e-12!13;CL:0000066!1.80e-12!254;CL:0002251!1.17e-10!21;CL:0000240!1.35e-10!6;CL:0000311!1.35e-10!6;CL:0000079!1.35e-10!6;CL:0000237!1.35e-10!6;CL:0000036!1.35e-10!6;CL:0000357!1.35e-10!6;CL:0000114!1.35e-10!6;CL:0000362!3.57e-08!8;CL:0002336!7.45e-08!1;CL:0002261!7.45e-08!1;CL:0002170!7.45e-08!1;CL:0000076!3.89e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0000307;1.52e-44;3!CL:0002202;1.73e-33;9!CL:0002632;1.73e-33;9!CL:0002368;1.75e-23;13!CL:0000317;9.07e-18;2!CL:1000448;9.07e-18;2!CL:0002308;9.07e-18;2!CL:0002140;9.07e-18;2!CL:0000362;9.73e-16;9!CL:0002328;2.59e-12;3!CL:0002159;1.72e-10;14!CL:0000312;5.35e-08;5!CL:0000622;6.55e-08;5!CL:0000240;7.17e-07;6!CL:0000311;7.17e-07;6!CL:0000079;7.17e-07;6!CL:0000237;7.17e-07;6!CL:0000154;8.48e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.91e-44,3;CL:0000069,1.91e-44,3;CL:0000307,1.91e-44,3;CL:0000377,1.91e-44,3;CL:0002202,1.55e-33,9;CL:0002632,1.55e-33,9;CL:0002368,1.62e-23,13;CL:0000317,1.07e-17,2;CL:1000448,1.07e-17,2;CL:0002308,1.07e-17,2;CL:0002140,1.07e-17,2;CL:0000362,1.05e-15,9;CL:0002328,2.07e-12,3;CL:0002159,1.81e-10,14;CL:0000312,5.35e-08,5;CL:0000622,7.01e-08,5;CL:0002076,8.13e-08,42;CL:0000240,7.17e-07,6;CL:0000311,7.17e-07,6;CL:0000079,7.17e-07,6;CL:0000237,7.17e-07,6;CL:0000036,7.17e-07,6;CL:0000357,7.17e-07,6;CL:0000114,7.17e-07,6;CL:0000154,8.97e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000377;1.52e-44;3!UBERON:0008814;9.07e-18;2!UBERON:0010056;9.07e-18;2!CL:0000357;7.17e-07;6!CL:0000114;7.17e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004815!9.68e-21!3;UBERON:0002031!9.68e-21!3;UBERON:0001949!2.97e-20!3;UBERON:0001004!7.78e-20!72;UBERON:0000072!5.66e-18!46;UBERON:0007196!1.36e-16!14;UBERON:0001558!1.36e-16!14;UBERON:0002185!1.06e-15!4;UBERON:0000065!2.65e-15!53;UBERON:0000166!2.06e-14!21;UBERON:0000165!9.08e-14!28;UBERON:0000930!9.08e-14!28;UBERON:0001007!1.45e-12!155;UBERON:0001555!1.45e-12!155;UBERON:0007026!1.45e-12!155;UBERON:0008947!2.13e-12!38;UBERON:0003258!2.13e-12!38;UBERON:0004119!3.36e-11!169;UBERON:0000925!3.36e-11!169;UBERON:0006595!3.36e-11!169;UBERON:0005178!3.68e-11!34;UBERON:0002224!3.68e-11!34;UBERON:0000161!8.04e-11!35;UBERON:0005181!8.26e-11!35;UBERON:0004807!1.19e-10!28;UBERON:0001723!8.16e-10!3;UBERON:0001033!8.16e-10!3;UBERON:0010056!8.16e-10!3;UBERON:0001444!1.47e-09!48;UBERON:0006562!1.74e-09!11;UBERON:0003102!3.63e-09!95;UBERON:0003126!4.86e-09!7;UBERON:0001005!4.86e-09!7;UBERON:0000063!9.19e-09!97;UBERON:0001041!1.29e-08!98;UBERON:0001557!3.32e-08!19;UBERON:0004921!3.62e-08!129;UBERON:0004185!3.62e-08!129;UBERON:0001828!6.50e-08!8;UBERON:0002372!1.99e-07!1;UBERON:0001961!1.99e-07!1;UBERON:0001744!1.99e-07!1;UBERON:0001735!1.99e-07!1;UBERON:0000485!3.08e-07!9;UBERON:0000077!5.24e-07!130;UBERON:0000915!6.68e-07!52;UBERON:0000064!8.13e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0007196;1.79e-20;15!UBERON:0001558;1.79e-20;15!UBERON:0003126;8.62e-20;7!UBERON:0001005;8.62e-20;7!UBERON:0002419;9.07e-18;2!UBERON:0007771;9.07e-18;2!UBERON:0003297;9.07e-18;2!UBERON:0001821;9.07e-18;2!UBERON:0003487;9.07e-18;2!UBERON:0001820;9.07e-18;2!UBERON:0001723;2.59e-12;3!UBERON:0004815;2.59e-12;3!UBERON:0002031;2.59e-12;3!UBERON:0001033;2.59e-12;3!UBERON:0001003;7.41e-10;15!UBERON:0007376;7.41e-10;15!UBERON:0005178;8.49e-10;34!UBERON:0002224;8.49e-10;34!UBERON:0000072;1.38e-09;37!UBERON:0005181;5.35e-08;35!UBERON:0002185;6.55e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007196,1.68e-20,15;UBERON:0001558,1.68e-20,15;UBERON:0003126,9.49e-20,7;UBERON:0001005,9.49e-20,7;UBERON:0002419,1.07e-17,2;UBERON:0007771,1.07e-17,2;UBERON:0003297,1.07e-17,2;UBERON:0001821,1.07e-17,2;UBERON:0003487,1.07e-17,2;UBERON:0001820,1.07e-17,2;UBERON:0005089,1.07e-17,2;UBERON:0005088,1.07e-17,2;UBERON:0004815,2.07e-12,3;UBERON:0002031,2.07e-12,3;UBERON:0001723,2.59e-12,3;UBERON:0001033,2.59e-12,3;UBERON:0010056,2.59e-12,3;UBERON:0000072,8.39e-12,47;UBERON:0000065,2.40e-10,54;UBERON:0001003,7.75e-10,15;UBERON:0007376,7.75e-10,15;UBERON:0007383,7.75e-10,15;UBERON:0005178,1.72e-09,34;UBERON:0002224,1.72e-09,34;UBERON:0005181,3.06e-09,35;UBERON:0008947,1.44e-08,38;UBERON:0003258,1.44e-08,38;UBERON:0002185,5.73e-08,5;UBERON:0001004,1.09e-07,74 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83884244895785,0.90361775633475,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.818238361772504,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439001141634502,0,2.6137532827024,0.370353780634118,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283550194484773,0,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601519410909855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30012049207304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,1.34060455107157,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.520679215005393,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.917142992608395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30630048738177,0.342233301085281,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@AB464521 | |||
}} |
Revision as of 00:20, 22 January 2014
Short description: | p5@AB464521 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_AB464521_5end |
Coexpression cluster: | C4386_Bronchial_Keratinocyte_Sebocyte_oral_tongue_Tracheal_Prostate |
Association with transcript: | 130bp_to_AB464521_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.91e-44 | 3 |
branched duct epithelial cell | 1.91e-44 | 3 |
tracheal epithelial cell | 1.91e-44 | 3 |
tracheoblast | 1.91e-44 | 3 |
epithelial cell of tracheobronchial tree | 1.55e-33 | 9 |
epithelial cell of lower respiratory tract | 1.55e-33 | 9 |
respiratory epithelial cell | 1.62e-23 | 13 |
sebum secreting cell | 1.07e-17 | 2 |
epithelial cell of sweat gland | 1.07e-17 | 2 |
epithelial cell of skin gland | 1.07e-17 | 2 |
acinar cell of sebaceous gland | 1.07e-17 | 2 |
epidermal cell | 1.05e-15 | 9 |
bronchial epithelial cell | 2.07e-12 | 3 |
general ecto-epithelial cell | 1.81e-10 | 14 |
keratinocyte | 5.35e-08 | 5 |
acinar cell | 7.01e-08 | 5 |
endo-epithelial cell | 8.13e-08 | 42 |
stratified squamous epithelial cell | 7.17e-07 | 6 |
keratin accumulating cell | 7.17e-07 | 6 |
stratified epithelial cell | 7.17e-07 | 6 |
keratinizing barrier epithelial cell | 7.17e-07 | 6 |
epithelial fate stem cell | 7.17e-07 | 6 |
stratified epithelial stem cell | 7.17e-07 | 6 |
surface ectodermal cell | 7.17e-07 | 6 |
protein secreting cell | 8.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
tracheobronchial tree | 1.68e-20 | 15 |
lower respiratory tract | 1.68e-20 | 15 |
trachea | 9.49e-20 | 7 |
respiratory airway | 9.49e-20 | 7 |
skin gland | 1.07e-17 | 2 |
epidermis gland | 1.07e-17 | 2 |
gland of integumental system | 1.07e-17 | 2 |
sebaceous gland | 1.07e-17 | 2 |
skin sebaceous gland | 1.07e-17 | 2 |
sweat gland | 1.07e-17 | 2 |
sweat gland placode | 1.07e-17 | 2 |
sebaceous gland placode | 1.07e-17 | 2 |
lower respiratory tract epithelium | 2.07e-12 | 3 |
epithelium of bronchus | 2.07e-12 | 3 |
tongue | 2.59e-12 | 3 |
gustatory system | 2.59e-12 | 3 |
future tongue | 2.59e-12 | 3 |
segment of respiratory tract | 8.39e-12 | 47 |
respiratory tract | 2.40e-10 | 54 |
skin epidermis | 7.75e-10 | 15 |
outer epithelium | 7.75e-10 | 15 |
enveloping layer of ectoderm | 7.75e-10 | 15 |
thoracic cavity element | 1.72e-09 | 34 |
thoracic cavity | 1.72e-09 | 34 |
thoracic segment organ | 3.06e-09 | 35 |
respiratory primordium | 1.44e-08 | 38 |
endoderm of foregut | 1.44e-08 | 38 |
bronchus | 5.73e-08 | 5 |
respiratory system | 1.09e-07 | 74 |