FFCP PHASE1:Hg19::chr4:331578..331615,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7700 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12926 | |||
|TSSclassifier=strong | |||
|UniProt=D6RIY0,Q15928 | |||
|association_with_transcript=0bp_to_ENST00000366506,ENST00000512994,NM_003441,uc003fzz.2,uc003gaa.2,uc003gab.2_5end | |||
|coexpression_cluster_id=C1815 | |||
|description=CAGE_peak_1_at_ZNF141_5end | |||
|id=chr4:331578..331615,+ | |||
|ontology_enrichment_celltype=CL:0000037!9.05e-08!172;CL:0000566!9.05e-08!172;CL:0000738!1.18e-07!140;CL:0002031!1.78e-07!124;CL:0002032!1.91e-07!165;CL:0000837!1.91e-07!165;CL:0000838!7.21e-07!52;CL:0000988!7.99e-07!182 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,5.61e-09,168;CL:0000738,5.97e-09,136;CL:0002031,7.92e-09,120;CL:0002032,1.22e-08,161;CL:0000837,1.22e-08,161;CL:0000988,3.69e-08,177;CL:0002087,4.89e-07,115;CL:0000838,7.62e-07,52 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.44e-28!115;UBERON:0000073!1.99e-15!94;UBERON:0001016!1.99e-15!94;UBERON:0001049!9.91e-15!57;UBERON:0005068!9.91e-15!57;UBERON:0006241!9.91e-15!57;UBERON:0007135!9.91e-15!57;UBERON:0001017!6.17e-14!82;UBERON:0005743!8.87e-14!86;UBERON:0002780!1.90e-12!41;UBERON:0001890!1.90e-12!41;UBERON:0006240!1.90e-12!41;UBERON:0003080!3.06e-12!42;UBERON:0002616!6.90e-12!59;UBERON:0002346!8.49e-11!90;UBERON:0000955!2.21e-10!69;UBERON:0006238!2.21e-10!69;UBERON:0003075!3.46e-10!86;UBERON:0007284!3.46e-10!86;UBERON:0002020!8.02e-10!34;UBERON:0003528!8.02e-10!34;UBERON:0002791!2.31e-09!33;UBERON:0001893!2.51e-09!34;UBERON:0001869!8.34e-09!32;UBERON:0003056!8.53e-08!61;UBERON:0000956!6.98e-07!25;UBERON:0000203!6.98e-07!25;UBERON:0002619!7.30e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.53e-09;41!UBERON:0001890;1.53e-09;41!UBERON:0002791;9.13e-09;32!UBERON:0003528;1.23e-08;34!UBERON:0002020;1.23e-08;34!UBERON:0000073;1.80e-08;53!UBERON:0002616;1.80e-08;53!UBERON:0001869;2.51e-08;32!UBERON:0001893;3.70e-08;34!UBERON:0007023;4.94e-08;114!UBERON:0000922;2.03e-07;49!UBERON:0000956;6.00e-07;25!UBERON:0000203;6.00e-07;25!UBERON:0002619;6.34e-07;22!UBERON:0001016;9.31e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.75e-28,114;UBERON:0001016,1.10e-15,89;UBERON:0001049,6.48e-15,56;UBERON:0005068,6.48e-15,56;UBERON:0006241,6.48e-15,56;UBERON:0007135,6.48e-15,56;UBERON:0001017,4.90e-14,81;UBERON:0000073,1.03e-13,53;UBERON:0002616,1.03e-13,53;UBERON:0002780,1.89e-12,41;UBERON:0001890,1.89e-12,41;UBERON:0003080,1.89e-12,41;UBERON:0006240,1.89e-12,41;UBERON:0002346,3.76e-11,86;UBERON:0003075,1.55e-10,82;UBERON:0007284,1.55e-10,82;UBERON:0000955,1.82e-10,68;UBERON:0006238,1.82e-10,68;UBERON:0003528,7.99e-10,34;UBERON:0002020,7.99e-10,34;UBERON:0001893,2.51e-09,34;UBERON:0002791,2.62e-09,32;UBERON:0001869,8.31e-09,32;UBERON:0003056,3.26e-08,61;UBERON:0000956,6.96e-07,25;UBERON:0000203,6.96e-07,25;UBERON:0002619,7.28e-07,22 | |||
|phase1_expression=5.81370813665781,5.1384125733836,6.20199378022273,3.00219895059391,2.23480547213644,4.36169262050184,2.53299878168311,5.68547886084148,3.65659879479774,3.93174298402414,3.48900583986214,9.17453762946723,3.9565046734268,7.05468211872266,4.30816588446291,3.36162573225888,3.61616716814386,3.65155045193687,0.487932798790507,8.49535300729837,3.26401105990805,4.38836610069323,14.3117993565528,11.3605772810494,13.8096903554283,12.6846253541599,11.4119819335425,12.278881884934,6.29382842958246,10.747223146722,8.82451902901633,6.43594857135249,3.31326510656075,2.21852406100073,16.3455793224436,39.9495543289654,24.6624369041272,11.6339035791694,9.22504458362652,9.76548918221333,18.3610688876738,29.1504299417082,27.0454346015896,9.16008904311258,15.4929136912412,17.4660524055228,5.57829688573643,10.6903650885675,11.7688420940139,5.75384784644301,10.5025889676931,9.93225365532058,8.27389633767885,9.68227025375739,8.12558919566051,8.84738995850242,16.3743690034707,15.2811969422658,5.81559395504715,8.98601275813062,8.31138263538754,10.5552416059749,10.3721101963249,9.37694451171927,4.93355705668593,9.64554881974938,9.34233373493363,7.03496262718881,10.9511412868242,14.3344637505377,5.44859552370032,11.4166067156145,9.81033401066742,10.5627643155971,12.7562579979026,13.4181533125361,13.0301212129934,13.3657434628941,14.4653028027372,7.98035682475496,9.94583385995451,12.6038266097597,42.2390986707174,36.0451483433007,40.9174256777235,36.6987991407196,42.4419746258173,41.3821756767228,37.0185128759523,37.2080964268792,41.5525467449897,41.6938404453367,40.9032354093995,21.1474125726441,21.2993253932984,28.4454811557083,27.7360775860505,15.7204305099666,12.7472929379696,32.7685530965729,34.8736825297942,39.2961678759829,35.068811113424,18.9397776704795,16.7925367260657,22.3749233529457,30.3300327416817,15.2428670473553,14.8267656218261,22.5279929307036,19.8972012805811,30.1395209164455,56.2006074384209,64.2097987415311,58.539893330787,19.7158256293765,20.3106861609018,20.2740192834752,40.4831507231205,32.812237675382,33.2052561466773,27.5631092890028,37.6437797694432,44.2833674594288,39.9778324967507,36.7004740668226,19.7070719261051,16.9349664308775,13.9068901807424,22.302958197951,0,4.02420515822182,6.26526553033299,4.3372698286148,5.0133791063589,5.35932120155048,6.36228757640879,6.8128881842369,12.573130682821,7.09534071880205,6.85111328406383,12.312033096785,2.91436230634034,4.44941331341315,16.2273696827342,19.3284008402187,14.0935438149997,10.9705687180457,10.8679033048224,9.65789503456869,3.37896092523399,0.860234595106124,4.16568601929113,2.26123176769604,2.93649605346934,5.22724279686128,3.34391946458897,10.0782536076038,11.028754143288,17.4054718637629,2.81980521976403,6.84244895146661,4.39311703586705,5.14728312484216,4.0507097394088,12.4126622314871,7.85852804191594,7.77019215334923,4.5994991239765,0.949265659568129,1.64881569537367,10.5424333948851,11.6334079244498,3.92484646928281,3.47880366186723,4.55869841992487,15.2270557935202,9.46560848471085,3.19201543978521,5.04609840128076,2.1349799145941,1.97334038733728,15.5605517699883,5.38842688278752,7.5192475432191,6.50836938873205,8.64263886719998,2.34321431833797,5.93104145977609,2.85235910772225,5.08125513876124,8.45528390235107,8.25552016277471,10.6742613093709,8.9827835352153,8.47556789451199,8.16273671288547,7.12801714369232,5.43987244412825,1.82032272387605,1.43723628363248,10.6051751791062,13.888155705788,9.97430815743058,3.95079858792754,1.83892677479412,4.6573798261045,3.97012641060074,14.351170855109,10.0371972744727,9.74886745333984,10.2030972668697,6.90451945897541,12.6243864622358,4.28068769562657,13.33333024706,5.84622030967192,14.1362913576704,9.48113956015683,10.5069936932228,7.10019185033229,5.64211750074785,4.0694542154517,3.86521706326594,3.54569956768085,6.59650569394709,24.6386886381783,23.8553582978673,23.0064006881646,15.7564803623363,22.9611974296822,10.5843434131991,6.25798129319264,1.92972281457866,0,6.50115099244771,3.60939740834793,0,0,0,0,0,0,0,0,0,2.95262181849859,5.60967095213783,4.115740113314,5.88034845542168,19.0132552232746,23.587853200263,18.3144871071235,0,19.9241270439844,7.72055146343365,4.17051084552777,2.24803506515239,4.62433273093502,6.94413338688972,4.23550796903422,4.15973914111831,4.3299402607582,10.2018756378068,6.92711295991348,5.77465791044295,5.09284063834272,6.27838702374174,12.6432703673484,10.3018339451385,14.280586353069,9.82817913584798,7.72882043901387,0,7.39121364074982,6.80520466763455,1.88072897675981,4.35950907770943,1.53353071666084,77.8407915875591,25.2699005617959,28.4039518290858,40.0653470499153,31.0556386228895,13.2075620127712,4.20187268114105,9.37739577680376,3.4214489204541,10.5912317484423,7.20823338825402,11.7188837378537,6.16720963899484,4.3596006883328,10.267360014933,8.01484637698222,0,2.535908257668,4.78688609852767,1.04007436911366,2.31486636835928,2.83698264046557,3.72991050622539,8.43570162583071,4.88359444852299,4.11620168390384,3.58309802723109,6.75244702610837,4.75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| |||
|short_description=p1@ZNF141 | |||
}} |
Revision as of 23:41, 21 January 2014
Short description: | p1@ZNF141 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZNF141_5end |
Coexpression cluster: | C1815_CD4_cerebellum_cord_CD19_pineal_parietal_pituitary |
Association with transcript: | 0bp_to_ENST00000366506, ENST00000512994, NM_003441, uc003fzz.2, uc003gaa.2, uc003gab.2_5end |
EntrezGene: | ZNF141 |
HGNC: | 12926 |
UniProt: | D6RIY0Q15928 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 5.61e-09 | 168 |
leukocyte | 5.97e-09 | 136 |
hematopoietic lineage restricted progenitor cell | 7.92e-09 | 120 |
hematopoietic oligopotent progenitor cell | 1.22e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.22e-08 | 161 |
hematopoietic cell | 3.69e-08 | 177 |
nongranular leukocyte | 4.89e-07 | 115 |
lymphoid lineage restricted progenitor cell | 7.62e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
adult organism | 8.75e-28 | 114 |
nervous system | 1.10e-15 | 89 |
neural tube | 6.48e-15 | 56 |
neural rod | 6.48e-15 | 56 |
future spinal cord | 6.48e-15 | 56 |
neural keel | 6.48e-15 | 56 |
central nervous system | 4.90e-14 | 81 |
regional part of nervous system | 1.03e-13 | 53 |
regional part of brain | 1.03e-13 | 53 |
regional part of forebrain | 1.89e-12 | 41 |
forebrain | 1.89e-12 | 41 |
anterior neural tube | 1.89e-12 | 41 |
future forebrain | 1.89e-12 | 41 |
neurectoderm | 3.76e-11 | 86 |
neural plate | 1.55e-10 | 82 |
presumptive neural plate | 1.55e-10 | 82 |
brain | 1.82e-10 | 68 |
future brain | 1.82e-10 | 68 |
brain grey matter | 7.99e-10 | 34 |
gray matter | 7.99e-10 | 34 |
telencephalon | 2.51e-09 | 34 |
regional part of telencephalon | 2.62e-09 | 32 |
cerebral hemisphere | 8.31e-09 | 32 |
pre-chordal neural plate | 3.26e-08 | 61 |
cerebral cortex | 6.96e-07 | 25 |
pallium | 6.96e-07 | 25 |
regional part of cerebral cortex | 7.28e-07 | 22 |