FFCP PHASE1:Hg19::chr3:193310875..193310926,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84239 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25422 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000449483,ENST00000489140_5end | |||
|description=CAGE_peak_2_at_ATP13A4_5end | |||
|id=chr3:193310875..193310926,- | |||
|ontology_enrichment_celltype=CL:0000542!5.06e-27!53;CL:0000051!5.06e-27!53;CL:0000838!2.61e-26!52;CL:0000945!2.28e-14!24;CL:0000826!2.28e-14!24;CL:0000084!3.05e-12!25;CL:0000827!3.05e-12!25;CL:0000988!2.15e-10!182;CL:0000037!1.11e-09!172;CL:0000566!1.11e-09!172;CL:0000791!3.16e-09!18;CL:0000789!3.16e-09!18;CL:0002420!3.16e-09!18;CL:0002419!3.16e-09!18;CL:0000790!3.16e-09!18;CL:0000236!2.10e-08!14;CL:0002032!3.26e-08!165;CL:0000837!3.26e-08!165 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.40e-22;53!CL:0000945;7.99e-21;24!CL:0000084;1.18e-16;25!CL:0000791;6.65e-13;18!CL:0000789;6.65e-13;18!CL:0002419;6.65e-13;18!CL:0000236;1.03e-10;13!CL:0000625;5.01e-09;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.20e-39,53;CL:0000051,2.20e-39,53;CL:0000838,2.66e-38,52;CL:0000945,4.93e-21,24;CL:0000826,4.93e-21,24;CL:0000084,6.49e-17,25;CL:0000827,6.49e-17,25;CL:0000988,1.05e-16,177;CL:0000037,1.33e-15,168;CL:0002032,3.11e-13,161;CL:0000837,3.11e-13,161;CL:0000791,3.26e-13,18;CL:0000789,3.26e-13,18;CL:0002420,3.26e-13,18;CL:0002419,3.26e-13,18;CL:0000790,3.26e-13,18;CL:0000738,6.46e-13,136;CL:0002087,2.98e-12,115;CL:0000236,5.77e-12,14;CL:0002031,6.26e-11,120;CL:0000625,2.78e-09,11 | |||
|ontology_enrichment_development_v019=CL:0000051;1.40e-22;53!CL:0000790;6.65e-13;18!UBERON:0006601;3.23e-07;82 | |||
|ontology_enrichment_disease=DOID:2531!3.17e-12!51;DOID:0060083!3.17e-12!51;DOID:1240!1.63e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:0060058;2.96e-08;10!DOID:2531;1.71e-07;51!DOID:0060083;1.71e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.61e-11,51;DOID:0060083,1.61e-11,51;DOID:0060058,2.82e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.95e-22!57;UBERON:0005068!2.95e-22!57;UBERON:0006241!2.95e-22!57;UBERON:0007135!2.95e-22!57;UBERON:0007023!2.64e-21!115;UBERON:0000955!1.24e-18!69;UBERON:0006238!1.24e-18!69;UBERON:0002616!1.19e-17!59;UBERON:0000073!2.02e-17!94;UBERON:0001016!2.02e-17!94;UBERON:0002780!4.84e-17!41;UBERON:0001890!4.84e-17!41;UBERON:0006240!4.84e-17!41;UBERON:0003080!5.21e-17!42;UBERON:0001017!6.52e-17!82;UBERON:0005743!9.01e-17!86;UBERON:0002346!8.64e-16!90;UBERON:0003075!9.32e-16!86;UBERON:0007284!9.32e-16!86;UBERON:0002020!7.26e-14!34;UBERON:0003528!7.26e-14!34;UBERON:0001893!1.04e-13!34;UBERON:0002791!2.82e-13!33;UBERON:0001869!1.53e-12!32;UBERON:0000153!2.73e-12!129;UBERON:0007811!2.73e-12!129;UBERON:0003056!7.64e-12!61;UBERON:0000033!1.71e-10!123;UBERON:0002619!7.00e-10!22;UBERON:0000956!2.95e-09!25;UBERON:0000203!2.95e-09!25;UBERON:0001950!4.17e-09!20;UBERON:0000924!7.44e-08!173;UBERON:0006601!7.44e-08!173;UBERON:0004121!1.16e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.81e-18;41!UBERON:0001890;2.81e-18;41!UBERON:0000073;1.25e-17;53!UBERON:0002616;1.25e-17;53!UBERON:0001893;2.88e-17;34!UBERON:0003528;3.01e-17;34!UBERON:0002020;3.01e-17;34!UBERON:0002791;1.59e-16;32!UBERON:0001869;1.83e-16;32!UBERON:0002619;6.27e-15;22!UBERON:0001950;9.16e-14;20!UBERON:0000956;2.15e-13;25!UBERON:0000203;2.15e-13;25!UBERON:0000955;3.78e-11;68!UBERON:0001017;8.67e-11;75!UBERON:0001016;1.94e-09;83!UBERON:0000125;6.44e-09;9!UBERON:0002308;6.44e-09;9!UBERON:0002420;1.26e-08;9!UBERON:0007245;1.26e-08;9!UBERON:0010009;1.26e-08;9!UBERON:0010011;1.26e-08;9!UBERON:0000454;1.26e-08;9!UBERON:0000178;3.65e-08;15!UBERON:0000179;3.65e-08;15!UBERON:0000463;3.65e-08;15!UBERON:0002390;1.39e-07;32!UBERON:0009663;5.19e-07;7!UBERON:0007023;9.86e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.14e-32,56;UBERON:0005068,2.14e-32,56;UBERON:0006241,2.14e-32,56;UBERON:0007135,2.14e-32,56;UBERON:0000073,1.51e-29,53;UBERON:0002616,1.51e-29,53;UBERON:0002780,4.07e-25,41;UBERON:0001890,4.07e-25,41;UBERON:0003080,4.07e-25,41;UBERON:0006240,4.07e-25,41;UBERON:0000955,1.50e-24,68;UBERON:0006238,1.50e-24,68;UBERON:0001017,3.98e-22,81;UBERON:0001016,3.19e-21,89;UBERON:0003528,2.82e-20,34;UBERON:0002020,2.82e-20,34;UBERON:0001893,4.89e-20,34;UBERON:0007023,6.05e-20,114;UBERON:0003075,1.36e-19,82;UBERON:0007284,1.36e-19,82;UBERON:0002346,1.82e-18,86;UBERON:0002791,1.90e-18,32;UBERON:0001869,2.93e-18,32;UBERON:0003056,7.58e-16,61;UBERON:0002619,7.32e-15,22;UBERON:0001950,1.10e-13,20;UBERON:0000956,2.88e-13,25;UBERON:0000203,2.88e-13,25;UBERON:0010371,5.29e-13,104;UBERON:0010314,1.66e-09,132;UBERON:0000125,8.13e-09,9;UBERON:0002308,8.13e-09,9;UBERON:0002420,1.27e-08,9;UBERON:0007245,1.27e-08,9;UBERON:0010009,1.27e-08,9;UBERON:0010011,1.27e-08,9;UBERON:0000454,1.27e-08,9;UBERON:0003076,2.08e-08,15;UBERON:0003057,2.08e-08,15;UBERON:0000178,2.56e-08,15;UBERON:0000179,2.56e-08,15;UBERON:0000463,2.56e-08,15;UBERON:0009663,6.56e-07,7 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.140954404095971,0,0.893922188854576,0.872338524100369,0,0,1.04474251279935,0.245733936501509,0,0.436882744260345,0.791300934685361,0.74259811776028,0.662794751455832,0,0.602694528023977,0,0,0.369363174230364,1.02000345622126,0.313454721478088,1.14494394852423,0.273748850145768,0.376627918784408,5.27252499660864,4.02292888304734,5.43104391064387,0,1.15148819429164,0.309632246632152,0,0,0.369754010166788,5.34523684004081,4.97592313705975,2.64240395401362,0.553995408531877,0.601633342410425,0.868043482863407,0.447830948479849,3.88672399222775,2.06060454107349,0.145398238779565,0,0.242584061187816,0,0,0,0,0.768482119587302,0,0,0,0,0.188242339542605,0,0,0,0.320929027076094,0,0,0,0,0,0.56738522469114,0,0.251248665256743,0,0,0,0,0,0.211255286311942,0,0.209658645508376,0.336985893439485,0,0,0.285012743741249,0.19891667719909,0.182664153764634,1.75996244461323,6.00752472388345,3.55803701545422,2.56038133539904,3.2031678962881,6.8970292794538,3.96626923670917,4.77026877267682,6.83055562931338,1.76171156811282,3.44045905312706,2.64342657158052,1.12101712596307,2.10707267820062,1.96709770113833,2.35806457649499,1.43921049299656,3.67810289859492,4.56291173287027,4.2610302516126,13.6378709885538,2.33961959458865,2.3568472597987,2.43687284041983,3.24964636518019,3.5865569523189,2.60118695119756,4.43982342429925,4.42160028457357,3.47763702882063,3.70716407905151,5.88589821797369,5.22677619024884,3.51258962362455,3.06576394881537,2.74901956386104,4.04831507231205,2.86708872891687,3.90650072313851,5.70271226669025,4.81840381048873,4.73550461271348,4.99722906209383,4.49876778883632,1.64225599384209,4.83856183739358,2.40696176205157,3.04131248153878,0,0,0.12786256184353,0,0.50133791063589,0.434539556882471,0,0.486634870302636,0.283604451492204,0.443458794925128,0.527008714158756,2.03017567021455,0,0,0,0.348259474598534,0.26591592103773,0.476981248610684,1.14398982156026,1.48583000531826,0.198762407366705,0,0,0,0,0,0,0.258416759169329,1.06729878806013,0.66944122552934,0,0,0,0.367663080345869,0.81014194788176,0,0,0.112611480483322,0,0,0.183201743930407,0,0,0.436094052142534,0,0.379891534993739,0.132409180813219,0,0.354668382198357,0,0,0,0.622422070799533,0.67355336034844,0.490385709340376,0.454072282934794,0,0.468642863667593,0,0,0.149448680551801,0.469737994575059,0.323745888736263,0,0.204154171254893,0.61417158655884,0.723280468230358,0,0.494533858557114,0,0,0.168336113954066,0.625592599359821,0.277064115484183,1.75591048352335,0,0.901428353439581,0.453728732640084,0.179389635688862,0.640672166455702,0,0.300091096084402,0.309157587715317,0.257640540045629,0.558350568994769,0.168776332241266,0.389748020644795,0.504867548488229,0.368199594569197,0.323292113637624,0,0.604512589365842,0.169560592310488,0,0,0,0,0.132529768321485,0.116193942869518,0.621966330092223,0,0.36497735907583,4.69348596989448,0,0,0,0.721879481669586,0.709840800239063,0.168584690078102,0,0.220587945464788,0.435758888184812,0.71181185733329,0.269662616320329,0,0,0,0,0,0,0,0,0,6.62194649121976,0.614942192715568,0.171567810298526,0,0,0.301586917234893,0.462942225792648,0.325808305310325,0,0,1.73895607462615,0.352226082707465,0.288732895522148,0,0,0,0,0.738651018262192,0.468008530278475,0.743155811443641,0,0,0,0.0895585227028483,0.290633938513962,0,5.41929561685538,3.60998579454227,0.829312462163088,1.00883967391873,0.6312121671319,1.77794104018073,0.763976851116555,1.17217447210047,0,1.13110241973656,0.300343057843917,0.857479297891735,0.448524337381443,0,0.2933531432838,0.387815147273333,0,0,0.797814349754612,0,0.771622122786426,0,0.266422179016099,0,1.08524321078289,0,0,0,0.791951872933429,0,0,0.099972991182057,3.64871341923571,0,0,0,1.14861935834114,0,0,0,0.179060963239896,6.72510863961164,2.56139988262505,2.37190332345469,1.79680250791648,0.508189248444927,0,0.773288812777695,0.670065061337395,0,0,0,0.414415513436035,0.736148950314839,0.500170521059677,0.542530047399471,0.207970861530807,0.178428988797162,0.157702415033935,0.468565659970853,0,0,0,0,0,0.60818530127658,0.195801157462741,1.37257369524342,1.44737618286021,3.01999881146064,1.17400313583789,0,1.66435439510497,0,0.248107807818777,0.153461973288062,0,0.256278298511402,0.511707249066704,0,0,0,0.177561725313127,0.164254312027618,0,0.232420756919918,0.362578348774867,0.40101294060657,0.184161977871793,0.114814448164607,0.182091168006717,0.262248829918848,0.902399225814824,0.462092022626489,0,1.46139224653261,0.527758144464379,0,0.340187410553031,0.215915916102139,0,0.270946437543853,0.501689773854853,0.254876273045038,0,0.223874754722178,1.31555925987561,0.522870902049801,0,0.656029291399411,0.976135183992909,0.103041011647722,0.183138929636687,0.742585499285292,0,0,0,0.580024309752732,0.154048617114644,0.307007349452259,0.551346289938122,0.751941714077915,0.580066775656914,0.511359764496605,0.0890320356467374,0.165284915360978,0,0,0.10115778085555,0.464845549297286,0,0,0,0,0,0,0.143124886741991,0.372158369359667,0.316379424718726,0,0.25589779131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| |||
|short_description=p2@ATP13A4 | |||
}} |
Revision as of 23:22, 21 January 2014
Short description: | p2@ATP13A4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ATP13A4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000449483, ENST00000489140_5end |
EntrezGene: | ATP13A4 |
HGNC: | 25422 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.20e-39 | 53 |
common lymphoid progenitor | 2.20e-39 | 53 |
lymphoid lineage restricted progenitor cell | 2.66e-38 | 52 |
lymphocyte of B lineage | 4.93e-21 | 24 |
pro-B cell | 4.93e-21 | 24 |
T cell | 6.49e-17 | 25 |
pro-T cell | 6.49e-17 | 25 |
hematopoietic cell | 1.05e-16 | 177 |
hematopoietic stem cell | 1.33e-15 | 168 |
hematopoietic oligopotent progenitor cell | 3.11e-13 | 161 |
hematopoietic multipotent progenitor cell | 3.11e-13 | 161 |
mature alpha-beta T cell | 3.26e-13 | 18 |
alpha-beta T cell | 3.26e-13 | 18 |
immature T cell | 3.26e-13 | 18 |
mature T cell | 3.26e-13 | 18 |
immature alpha-beta T cell | 3.26e-13 | 18 |
leukocyte | 6.46e-13 | 136 |
nongranular leukocyte | 2.98e-12 | 115 |
B cell | 5.77e-12 | 14 |
hematopoietic lineage restricted progenitor cell | 6.26e-11 | 120 |
CD8-positive, alpha-beta T cell | 2.78e-09 | 11 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.61e-11 | 51 |
immune system cancer | 1.61e-11 | 51 |
lymphoma | 2.82e-08 | 10 |