FFCP PHASE1:Hg19::chr3:145940126..145940135,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57088 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16497 | |||
|TSSclassifier=strong | |||
|UniProt=C9J3P9 | |||
|association_with_transcript=22bp_to_ENST00000498625_5end | |||
|coexpression_cluster_id=C4290 | |||
|description=CAGE_peak_15_at_PLSCR4_5end | |||
|id=chr3:145940126..145940135,- | |||
|ontology_enrichment_celltype=CL:0002139!3.39e-15!24;CL:0000071!1.28e-11!18;CL:0002546!1.28e-11!18;CL:0000115!2.63e-11!35;CL:0002078!2.34e-08!44;CL:1000413!3.67e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0002138;4.34e-23;6!CL:0000182;5.08e-12;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,4.34e-23,6;CL:0002138,4.34e-23,6;CL:0005022,4.34e-23,6;CL:0000182,5.37e-12,12 | |||
|ontology_enrichment_development_v019=CL:0005022;4.34e-23;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.25e-19!115;UBERON:0004111!5.54e-12!241;UBERON:0000477!7.51e-12!286;UBERON:0001986!1.28e-11!18;UBERON:0004638!1.28e-11!18;UBERON:0004852!1.28e-11!18;UBERON:0000025!9.93e-11!194;UBERON:0000487!3.61e-09!22;UBERON:0005057!1.24e-08!26;UBERON:0003914!1.76e-08!118;UBERON:0002107!2.62e-08!19;UBERON:0006925!2.62e-08!19;UBERON:0008836!2.62e-08!19;UBERON:0002771!2.65e-08!3;UBERON:0003915!3.67e-08!9;UBERON:0004700!3.67e-08!9;UBERON:0001917!3.67e-08!9;UBERON:0006914!7.50e-08!25;UBERON:0002049!2.38e-07!79;UBERON:0007798!2.38e-07!79;UBERON:0002368!2.44e-07!35;UBERON:0000483!2.52e-07!309;UBERON:0000119!3.72e-07!312;UBERON:0008835!5.56e-07!22;UBERON:0003894!5.56e-07!22;UBERON:0000055!6.97e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0001473;1.33e-17;8!UBERON:0004536;1.33e-17;8!UBERON:0006558;1.33e-17;8!UBERON:0002107;2.39e-16;19!UBERON:0006925;2.39e-16;19!UBERON:0002465;2.66e-14;10!UBERON:0002423;1.28e-12;25!UBERON:0002368;1.21e-10;33!UBERON:0002365;4.08e-10;31!UBERON:0002330;4.08e-10;31!UBERON:0000949;7.77e-07;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,1.33e-17,8;UBERON:0004536,1.33e-17,8;UBERON:0006558,1.33e-17,8;UBERON:0002107,2.52e-16,19;UBERON:0006925,2.52e-16,19;UBERON:0008836,2.52e-16,19;UBERON:0002465,2.66e-14,10;UBERON:0008835,3.27e-14,22;UBERON:0003894,3.27e-14,22;UBERON:0009854,1.25e-13,23;UBERON:0007499,1.33e-12,25;UBERON:0009497,1.33e-12,25;UBERON:0000015,1.33e-12,25;UBERON:0002423,1.33e-12,25;UBERON:0006235,1.33e-12,25;UBERON:0004161,1.33e-12,25;UBERON:0009856,3.79e-12,26;UBERON:0002365,2.60e-10,31;UBERON:0002330,2.60e-10,31;UBERON:0002368,3.24e-09,35;UBERON:0000949,2.55e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0.56530794192401,0.838998872419812,0.825354125820202,0,0,0.35576626268671,0,0.402829317109147,0,0.488124115096339,0.367663080345869,0,0.625098097988558,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0.151357427644931,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,1.26755034821831,3.9313088667105,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,2.02113026865503,0,4.18559134916116,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75809815126273,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.394573622547734,0,0,0,0.185536196323703,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0.273810757783986,0,0,0,0,0,0.717873024576814,0,0,0.223171457441873,0.268733889946905,0,0,0.0787831823072236,0,0.202210631562555,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,1.32506888912221,0,0.13223260174269,0,0,0.427149650270779,0.157204305099666,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0.122026264901963,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0.227662191351298,0.443511850813194,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0.971421986118279,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0.310298987585686,0,0.23806443146374,0,0.0620747142958579,0,0.318235791390825,0,0.217716747896961,0,0,0.0717222053926763,0,0,0,0,0.179650404213174,0,0.122241444182866,0,0.665756774185513,0,0 | |||
|short_description=p15@PLSCR4 | |||
}} |
Revision as of 21:48, 21 January 2014
Short description: | p15@PLSCR4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_PLSCR4_5end |
Coexpression cluster: | C4290_Lymphatic_Hepatocyte_liver_adipose_breast_Renal_vagina |
Association with transcript: | 22bp_to_ENST00000498625_5end |
EntrezGene: | PLSCR4 |
HGNC: | 16497 |
UniProt: | C9J3P9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 4.34e-23 | 6 |
endothelial cell of lymphatic vessel | 4.34e-23 | 6 |
vascular lymphangioblast | 4.34e-23 | 6 |
hepatocyte | 5.37e-12 | 12 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 1.33e-17 | 8 |
lymph vasculature | 1.33e-17 | 8 |
lymphatic part of lymphoid system | 1.33e-17 | 8 |
liver | 2.52e-16 | 19 |
digestive gland | 2.52e-16 | 19 |
liver bud | 2.52e-16 | 19 |
lymphoid system | 2.66e-14 | 10 |
hepatic diverticulum | 3.27e-14 | 22 |
liver primordium | 3.27e-14 | 22 |
digestive tract diverticulum | 1.25e-13 | 23 |
epithelial sac | 1.33e-12 | 25 |
epithelium of foregut-midgut junction | 1.33e-12 | 25 |
anatomical boundary | 1.33e-12 | 25 |
hepatobiliary system | 1.33e-12 | 25 |
foregut-midgut junction | 1.33e-12 | 25 |
septum transversum | 1.33e-12 | 25 |
sac | 3.79e-12 | 26 |
exocrine gland | 2.60e-10 | 31 |
exocrine system | 2.60e-10 | 31 |
endocrine gland | 3.24e-09 | 35 |
endocrine system | 2.55e-07 | 45 |