FFCP PHASE1:Hg19::chr3:124826749..124826766,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84561 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15595 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-328bp_to_ENST00000461616_5end | |||
|description=CAGE_peak_16_at_SLC12A8_5end | |||
|id=chr3:124826749..124826766,- | |||
|ontology_enrichment_celltype=CL:0000077!5.01e-09!19 | |||
|ontology_enrichment_celltype_v019=CL:0000077;2.87e-28;19!CL:0002174;2.75e-12;1!CL:0000501;2.75e-12;1!CL:0000319;2.75e-12;1!CL:0000159;9.01e-07;2!CL:0002363;9.01e-07;2!CL:1000487;9.01e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,3.38e-28,19;CL:0000319,1.57e-12,1;CL:0002174,2.75e-12,1;CL:0000501,2.75e-12,1;CL:0000213,7.99e-09,58;CL:0000215,7.99e-09,58;CL:0000076,4.54e-08,63;CL:0000222,7.23e-08,121;CL:0000159,6.80e-07,2;CL:1000487,8.06e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000008;9.01e-07;2 | |||
|ontology_enrichment_disease=DOID:2394!5.44e-12!14;DOID:193!1.13e-07!29;DOID:120!4.19e-07!27 | |||
|ontology_enrichment_disease_v019=DOID:630;2.75e-12;1!DOID:0050177;2.75e-12;1!DOID:3030;2.75e-12;1!DOID:0050427;2.75e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,1.57e-12,1;DOID:630,1.96e-12,1;DOID:0050177,1.96e-12,1;DOID:0050427,1.96e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0002118!6.44e-08!5;UBERON:0004532!6.44e-08!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000341;9.01e-07;2!UBERON:0003566;9.01e-07;2!UBERON:0001777;9.01e-07;2 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0.730310090387373,0,0.246242116153576,0,0,0.286235987131057,0,0,0.152826811495903,0.164201178899891,0.393553906568396,0,0,0,0,0,0,0,0.426507697462265,0,0,0,0,0,0,0,0,0.755751887377619,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0.251248665256743,1.0429658368404,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.175669571386252,0,0,0,0,0,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.264818361626438,0.573673241497627,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0.769494313892781,0,0,0.4115740113314,0,0,0,0,0,0,0,0.109750285408626,0,0,0.0925884451585296,0,1.03993478527958,0,0,0,0,0,0,0,0,0.246217006087397,0,0.148631162288728,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0.845302752556,0,0,0,0,0,0,0,0,0,0.355391948742546,0.791951872933429,0.904318131178758,2.61460037580088,3.99891964728228,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.24538298343828,0.500170521059677,0,0.415941723061614,0.535286966391485,0.473107245101804,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0.30239029332968,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.68888668898764,0.364182336013434,0.262248829918848,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0.107420244868274,0,0.0852266274161009,0,0,0,0,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0,0,0,1.90630193923825,0.255897791311334,0,0,0,0,0.823611089208164,0,0,0,0,0,0,0,0,1.55545975149084,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0.329607748453519,0,0,0,0,0.102268682502155,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0.569219092059585,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0.288950589901519,0,0,0,1.28929632425987,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0,0,0.412618309791701,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554805861502613,0,0,0.889811221596536,0.457680136793847,0.302461847526478,0.466311601748341,0,0.318593534327405,0,0.310525913752519,0.414706207840855,0.265841714557995,0,1.05180326298053,2.66563648518157,0.406870733204662,0.181848659202559,0.214821114084977,0.464033759878494,0.796191777397232,0,0,0,0,0,0,0,0.680117776536817,2.08370226891451,2.20263034055821,0,0,2.41212454536578,0.176689145945881,1.54331230616732,0.168942440653073,0,0,1.21543982470953,0,0,0,0,0,1.96618327002975,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.918736432059601,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0.115525666150338,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0.0634158101939068,0,0.548257766857182,0,0,0,0,0,0,0,0.0887023701626388,0.115233987555779,0,0,0,0.118193840883968,0,0,0.157115589916002,0,0,0.215927591218621,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0.22910686854405,0,0,0,0,0.121917924982269,0,0,0,0,0,0.198950775161368,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0.50141507858475,0,0,0,0,0.213233981900981,1.1903221573187,0,0,0.112131862580613,0.509177266225319,2.62752345645685,0,0.342233301085281,0.0673520530145875,0,0,0,0.213454691755431,0,0,0,0,0,0,0,1.60284246151616 | |||
|short_description=p16@SLC12A8 | |||
}} |
Revision as of 21:04, 21 January 2014
Short description: | p16@SLC12A8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_SLC12A8_5end |
Coexpression cluster: | NA |
Association with transcript: | -328bp_to_ENST00000461616_5end |
EntrezGene: | SLC12A8 |
HGNC: | 15595 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 3.38e-28 | 19 |
mucus secreting cell | 1.57e-12 | 1 |
follicular cell of ovary | 2.75e-12 | 1 |
granulosa cell | 2.75e-12 | 1 |
lining cell | 7.99e-09 | 58 |
barrier cell | 7.99e-09 | 58 |
squamous epithelial cell | 4.54e-08 | 63 |
mesodermal cell | 7.23e-08 | 121 |
seromucus secreting cell | 6.80e-07 | 2 |
smooth muscle cell of prostate | 8.06e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 1.57e-12 | 1 |
genetic disease | 1.96e-12 | 1 |
monogenic disease | 1.96e-12 | 1 |
xeroderma pigmentosum | 1.96e-12 | 1 |