FFCP PHASE1:Hg19::chr3:121613201..121613210,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6565 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10921 | |||
|TSSclassifier=strong | |||
|UniProt=F5H4H4,B4E2A7,Q16348 | |||
|association_with_transcript=30bp_to_ENST00000542599,NM_001145998,NM_021082,uc003eep.2,uc011bjn.1_5end | |||
|description=CAGE_peak_6_at_SLC15A2_5end | |||
|id=chr3:121613201..121613210,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;1.14e-13;2!CL:0000083;1.31e-07;4!CL:0002563;1.75e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000083,1.31e-07,4;CL:0002563,1.92e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.78e-26;1!UBERON:0007297;1.14e-13;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1799;2.15e-26;1!DOID:10165;2.15e-26;1!DOID:1798;2.15e-26;1!DOID:1793;1.31e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,2.16e-26,1;DOID:10165,2.16e-26,1;DOID:1798,2.16e-26,1;DOID:1793,1.31e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.02e-32!115;UBERON:0002616!4.25e-20!59;UBERON:0001049!2.59e-19!57;UBERON:0005068!2.59e-19!57;UBERON:0006241!2.59e-19!57;UBERON:0007135!2.59e-19!57;UBERON:0002020!1.10e-18!34;UBERON:0003528!1.10e-18!34;UBERON:0001893!1.17e-18!34;UBERON:0002780!2.55e-18!41;UBERON:0001890!2.55e-18!41;UBERON:0006240!2.55e-18!41;UBERON:0001950!2.86e-18!20;UBERON:0003080!9.23e-18!42;UBERON:0001869!9.70e-18!32;UBERON:0005743!1.39e-17!86;UBERON:0001017!2.34e-17!82;UBERON:0002791!2.35e-17!33;UBERON:0002619!2.28e-16!22;UBERON:0000955!7.63e-16!69;UBERON:0006238!7.63e-16!69;UBERON:0002346!1.34e-15!90;UBERON:0003075!2.76e-15!86;UBERON:0007284!2.76e-15!86;UBERON:0000073!3.71e-15!94;UBERON:0001016!3.71e-15!94;UBERON:0000956!4.52e-14!25;UBERON:0000203!4.52e-14!25;UBERON:0000153!5.50e-14!129;UBERON:0007811!5.50e-14!129;UBERON:0003056!2.68e-13!61;UBERON:0000033!4.87e-12!123;UBERON:0001871!1.02e-09!7;UBERON:0000924!1.63e-09!173;UBERON:0006601!1.63e-09!173;UBERON:0004121!3.71e-09!169;UBERON:0000200!6.55e-09!6;UBERON:0000988!1.51e-07!3;UBERON:0002771!3.33e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001301;6.72e-26;1!UBERON:0003127;1.14e-13;2!UBERON:0000341;1.14e-13;2!UBERON:0006562;1.14e-13;2!UBERON:0006947;1.47e-09;3!UBERON:0004054;1.47e-09;3!UBERON:0001242;1.75e-07;4!UBERON:0005904;1.75e-07;4!UBERON:0001262;1.75e-07;4!UBERON:0004786;1.75e-07;4!UBERON:0004808;1.75e-07;4!UBERON:0001277;1.75e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,4.61e-26,1;UBERON:0003127,1.07e-13,2;UBERON:0000341,1.55e-13,2;UBERON:0006947,1.30e-09,3;UBERON:0004054,1.30e-09,3;UBERON:0005904,1.59e-07,4;UBERON:0001242,1.92e-07,4;UBERON:0001262,1.92e-07,4;UBERON:0004786,1.92e-07,4;UBERON:0004808,1.92e-07,4;UBERON:0001277,1.92e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265059536642971,0,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10689594688802,0,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27047312111232,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0.716084698702437,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0.139423744278603,0.615602068030377,0,0.46112780877612,0.0897576444097721,0.651884231532048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.404406797884062,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,1.39781334593624,0,0,0,0,0.290967049465258,0,0,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0.121499113316049,0,0.157611414598396,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.26446520348538,0,0,0.213574825135389,0.157204305099666,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0.244052529803926,0.1251909307065,0,0,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643324774124777,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0.619678821295011,0,0,0,0,0,0,0.192687675289379,0,0,0.615349092722265,0.252071696221718,0.207471757392654,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,3.40478702825849,0,0,0.0675375846183947,0,0,0.19024743058172,0.546974809018219,0.548257766857182,0,0,1.91643641459393,0,0,0,0,0.0887023701626388,0,0,0.271878931907327,0.197318320688547,0,0,0.549451649953598,0.314231179832004,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0.430227358820278,0,0,0.846774100381858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71421575442263,0,0.160482733378337,0,0.458729283404541,0,0,0.271965960763659,0,0,0,0,0,0.126166424835079,0.218531143927391,0,0,0,0,0,0.151557396436479,0.535928260312357,0,0.103432995861895,1.0661699095049,0.23806443146374,0,0.0620747142958579,0,0,0,0,0,0.404112318087525,0.932388670104793,1.33064142618405,0,0,0,0,2.34640942403454,0,0,0,0,0 | |||
|short_description=p6@SLC15A2 | |||
}} |
Revision as of 20:54, 21 January 2014
Short description: | p6@SLC15A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SLC15A2_5end |
Coexpression cluster: | NA |
Association with transcript: | 30bp_to_ENST00000542599, NM_001145998, NM_021082, uc003eep.2, uc011bjn.1_5end |
EntrezGene: | SLC15A2 |
HGNC: | 10921 |
UniProt: | F5H4H4B4E2A7Q16348 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of pancreas | 1.31e-07 | 4 |
intestinal epithelial cell | 1.92e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
epididymis | 4.61e-26 | 1 |
open tracheal system trachea | 1.07e-13 | 2 |
throat | 1.55e-13 | 2 |
male genital duct | 1.30e-09 | 3 |
internal male genitalia | 1.30e-09 | 3 |
duct of male reproductive system | 1.59e-07 | 4 |
intestinal mucosa | 1.92e-07 | 4 |
wall of intestine | 1.92e-07 | 4 |
gastrointestinal system mucosa | 1.92e-07 | 4 |
gastrointestinal system epithelium | 1.92e-07 | 4 |
intestinal epithelium | 1.92e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 2.16e-26 | 1 |
endocrine pancreas cancer | 2.16e-26 | 1 |
pancreatic endocrine carcinoma | 2.16e-26 | 1 |
pancreatic cancer | 1.31e-07 | 4 |