FFCP PHASE1:Hg19::chr3:87276407..87276493,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25978 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24537 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UQN3,B4DJG8,C9J0A7,B2RE76 | |||
|association_with_transcript=0bp_to_ENST00000263780,ENST00000471660,ENST00000472024,ENST00000494980,NM_001244644,NM_014043,uc003dqp.3,uc011bgn.1_5end | |||
|description=CAGE_peak_1_at_CHMP2B_5end | |||
|id=chr3:87276407..87276493,+ | |||
|ontology_enrichment_celltype=CL:0000766!2.88e-24!76;CL:0002057!8.88e-24!42;CL:0002009!6.66e-21!65;CL:0000860!1.73e-20!45;CL:0000557!4.03e-20!71;CL:0002194!7.89e-20!63;CL:0000576!7.89e-20!63;CL:0000040!7.89e-20!63;CL:0000559!7.89e-20!63;CL:0000839!1.97e-19!70;CL:0000738!5.74e-10!140;CL:0000763!2.66e-09!112;CL:0000049!2.66e-09!112;CL:0002031!1.79e-08!124;CL:0002087!1.67e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.16e-19;33!CL:0002057;6.16e-19;33!CL:0000473;2.35e-17;39!CL:0000234;2.35e-17;39!CL:0000576;1.00e-13;48!CL:0000766;2.53e-12;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.22e-26,72;CL:0000473,1.32e-25,48;CL:0000234,1.32e-25,48;CL:0000860,8.88e-24,42;CL:0002057,8.88e-24,42;CL:0002009,4.89e-23,61;CL:0000557,4.84e-22,67;CL:0002194,6.29e-22,59;CL:0000576,6.29e-22,59;CL:0000040,6.29e-22,59;CL:0000559,6.29e-22,59;CL:0000839,2.55e-21,66;CL:0000738,1.26e-10,136;CL:0000763,4.95e-10,108;CL:0000049,4.95e-10,108;CL:0002031,4.17e-09,120;CL:0002087,4.26e-08,115 | |||
|ontology_enrichment_development_v019=CL:0002057;2.07e-17;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.13e-16!80;UBERON:0001474!3.01e-15!86;UBERON:0000062!2.16e-14!511;UBERON:0004765!3.36e-14!101;UBERON:0001434!3.36e-14!101;UBERON:0002390!8.29e-12!102;UBERON:0003061!8.29e-12!102;UBERON:0002193!3.90e-09!112;UBERON:0002405!1.63e-08!115;UBERON:0007023!1.94e-08!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.61e-18,76;UBERON:0001474,1.46e-16,82;UBERON:0004765,2.87e-16,90;UBERON:0001434,1.89e-14,100;UBERON:0002390,9.47e-13,98;UBERON:0003061,9.47e-13,98;UBERON:0002405,8.35e-12,93;UBERON:0002193,7.42e-10,108;UBERON:0007023,2.19e-08,114 | |||
|phase1_expression=78.1217030863394,51.8123267816179,81.0487823551834,38.0278533741896,41.5673817817378,40.9999106327173,15.1979926900986,32.2177135447684,36.0436166915777,28.996604507178,16.7472280313383,32.3293230752655,31.388270409186,44.9271861244969,34.1339296999753,32.943932176137,33.7508935693427,32.1336439770444,34.643228714126,14.0358006207538,9.18003110599138,9.40364164434263,25.188766867533,20.3942893358597,27.368295431667,36.7548481647646,38.4230758625746,42.5038219093868,70.4122055559538,74.4629032308593,88.7096386601116,34.0185853057203,23.1928557459253,24.403764671008,24.9444385868571,28.2916772649969,36.1128540381862,60.9394949385065,83.6270345950491,65.1032612147555,70.5333743855762,70.6088191921375,75.4696413168167,98.4346076537653,132.634456234772,103.098226004822,135.506128516014,165.700658872796,163.83467020351,178.369283239733,183.411065874836,212.834006899727,170.649111964626,203.327675328905,249.184735333589,127.440063870343,173.295405286732,175.059594382721,135.59516432031,193.199274299808,145.129527556382,149.752490284769,166.153226798819,158.555607198162,149.747967132349,187.237124148076,157.57402899588,196.225207565516,186.169401876012,210.673179363963,110.182709479273,221.334859228526,176.902474579454,83.0233275205931,76.5375479874157,78.2026747746242,65.1506060649672,75.5389770992777,78.4340863081751,79.5185555038084,80.3623375884324,85.852152269378,42.2390986707174,42.0526730671841,50.7020274702226,52.0610871531139,50.0494983795016,45.9801951963587,48.2562757132949,53.4270102539804,67.7363433240244,71.0556999138836,67.2800881500403,40.973111859498,49.3247535423752,27.391944816608,45.6366666664093,40.0870978004148,45.8491342768906,42.1309968384509,38.4588274627637,41.6634069046565,29.2240092611867,38.4366076253849,42.1286447689017,45.8575161788096,41.1621872922824,31.8947386116931,31.7344808046103,26.9678163550029,29.5694519030858,33.6171579452661,34.1059095272739,33.4426035112141,28.2245914273437,32.0665439834112,45.9864592322306,47.4205874766029,44.5314657954325,29.626583532141,29.9498388773953,38.9685338223833,35.6863032214321,29.8208803989795,32.4819889036099,35.5165878066025,35.308503867605,44.9583037391153,39.3137087801756,38.2336426250589,43.8852359365131,36.2178464239963,44.4961715215486,28.9151321907653,29.0775988168816,36.2116297402059,42.1501551937083,40.3906942351188,36.7740438768224,35.6984329914728,38.8229752763617,32.4173211856839,13.8432209551166,16.6852999252993,64.2603839436273,63.9056135888311,58.5015026283007,35.7735936458013,40.039643754609,31.2024301116835,17.8886166630035,15.4842227119102,18.0513060835949,18.6551620834923,13.423981958717,22.2845613971455,21.9444714863651,32.5605116553354,44.8265490985255,40.8359147572898,18.9329779041299,18.2465305372443,17.32840608592,16.1771755352182,14.5825550618717,32.2372019105528,26.2699365972619,30.2924882500137,12.2653309972707,9.49265659568129,19.0529813687624,282.010093313175,337.368829809043,17.8798561378439,65.600297623782,43.0543739659571,59.319313004322,26.1021324881421,41.4962007172078,25.7911696065461,21.349799145941,27.6267654227219,40.4574346019696,29.7710585274011,23.5385140483381,18.0115338897468,38.0276110156799,16.4025002283658,32.152487913523,13.1208518955223,37.3621701379503,29.5934936582287,22.176593378434,23.4552847192755,39.8100633947042,34.1479402126715,47.9431624655552,41.5801000048719,35.8537047453907,16.3829045148845,13.6537446945085,37.5389534117568,35.9090152032537,52.0880537110264,35.9961649122287,32.7941941504951,42.2168945527537,36.7520273438468,29.9580691600399,44.6334942630806,38.3596741098807,17.4052835728953,32.3584941808698,39.4190026269813,52.4849534855083,33.9240427804945,40.728668157381,28.5250164895849,45.4726499292959,31.1976889660307,20.235546773447,30.3263815665197,32.7251943159241,80.9762974754214,66.004561182982,68.5462982979719,59.401194885113,53.0119073285941,51.7063045769357,55.3550033782078,55.005945490887,33.2129396759005,21.9029345261742,29.5890831568727,13.8134921352481,36.6850663145263,30.3189382301226,99.3777120334689,115.649097393578,109.901029626868,106.764565604957,103.492735943893,110.093567267549,110.022347458694,111.846235121447,115.424147083917,16.2394200017423,5.60967095213783,14.405090396599,8.82052268313252,34.2238594018943,62.9009418673681,43.1276631877425,15.0097453800981,103.187299937672,37.4017826450786,54.5458918480869,21.3563331189477,67.7565274054392,47.7756377018013,25.087239508895,10.3993478527958,41.8560891873293,46.2562315850557,67.3925904913616,25.9859605969933,28.7051017797499,36.3385430768083,42.6710374898009,42.0658219426488,78.2970079357924,65.7551985041258,56.331210507428,93.733833986777,94.9099024323556,81.2371307198874,57.1383374844172,54.9298143791388,30.2872316540517,94.0986784381252,55.9107555983985,42.9169199169398,52.17142313694,45.6997609003495,62.6089237720787,22.5373171079384,21.0991404978085,18.8179690624976,38.6631372564496,53.1607212383734,52.5920636040264,16.483269398768,17.0024426844979,31.6088011888295,102.771014027433,14.3062578340753,29.58559633946,71.5373533613302,39.5228260263191,13.1175760873692,14.1849132023278,15.985330740966,42.607442110128,19.5343777940919,23.0507294298615,41.0427592210106,46.5563452852735,19.7987968233357,132.331886529158,138.573819917447,186.14970958099,72.9742683847143,92.4153048235113,82.2252363983823,61.8232127168283,55.1337292003747,58.4811310666945,46.1852368269578,41.3007408326271,50.4951916336505,34.2980540620193,40.7853673617989,32.3441362289276,35.4226780132106,43.7042753662637,52.0559415430487,22.4253755705532,42.2140988642559,27.431366321086,199.235868369951,158.555573378133,254.451125249726,52.2665754723536,30.0102312635806,29.5678875832712,51.9927153827018,53.1718386615542,53.145713866436,42.9908993023257,36.414478067054,59.1259510545561,35.1808442394517,59.1160782696539,33.0020811689649,68.3774045863812,8.41944977089785,5.14715135716284,48.3837181127556,47.4571241800957,43.8650262572156,25.4627160014858,51.5949862482541,22.679271999726,72.1993720752641,72.7409753385416,57.8159794532132,92.132048314849,79.8263308544057,66.7543772745971,32.651974617898,31.767196923347,36.9328388651304,38.1891275464212,36.8670644720371,27.0770181811705,89.1942737986172,68.7737193140267,87.8452634448451,26.6369519741888,33.8689572492494,44.4511766712448,25.7183779357225,59.4558402446082,16.471345152714,1.46139224653261,42.431754814936,7.96133688496276,12.4168404851856,28.0690690932781,6.16909010761157,8.94123243894714,6.02027728625824,35.6826782263054,38.2294964107213,14.5518590569416,43.8519753291869,37.9081403986106,54.1109763995581,42.9699185866614,70.9324900368181,58.630335627554,15.1089616950267,13.5315579869764,43.0699153497129,27.9525905795704,53.0256968485727,23.2976431084014,23.7234870356552,23.7930695825501,20.5376493001951,36.0932022757399,35.529090008986,36.2213166518429,22.2580089116843,63.3041225832546,56.3116897379761,36.4972357734511,75.6660200799513,39.047026140972,33.0552964172172,33.4577889677088,40.9684661634198,22.8891593036319,28.7077887384774,39.8447071073428,59.3968279979264,42.7982124763617,54.4172610516209,57.9515789528428,10.2359116524534,53.920312492274,20.6832111151859,15.6989728039846,49.8246707505782,43.3768506982967,45.1221500983979,19.4095182310383,38.042477081522,31.1731257616846,7.31450608634386,47.5241304781005,20.0735278837835,41.9054728022516,36.4826014440579,16.9512174930364,26.465536490214,37.8160215887495,51.737204459944,18.520817096534,43.9449483871244,45.6548348166084,28.1939383270773,20.0003877797891,48.9032711015816,43.2295780457733,44.227210383675,54.9879649309427,43.6992805066165,30.6244250452709,10.62524886544,16.0969971312692,59.561487777092,31.504206950182,28.3116560639439,59.5930258917012,25.3998169876026,20.2165770801151,30.1532504404939,61.1064244550512,39.073465910877,35.1733115285493,36.4574199791464,42.1670242560287,37.4339668508437,48.6354983394538,38.3422320439062,27.7593811702995,45.4002302291761,54.8613517500114,34.0605900213634,40.1334858271552,32.749111345653,22.5519643414473,32.8418121821374,27.1427945148631,30.4493538510463,25.8241770923137,30.5144623858082,38.1884162234304,16.4328968903898,21.6218256166772,30.0761372508081,26.5788091148517,18.9493928622365,18.9691724759585,34.0676990152261,53.2433284371435,17.8199643298906,16.7757080919312,21.3566901391243,21.1019143034204,35.9143964324863,46.7732116001307,26.5046564906463,25.3134695678343,35.2467512719624,64.7506269812441,46.0035682913747,13.1069363489475,37.8907506543426,19.3212579828361,127.250810365189,71.2715233998333,102.898835203243,54.6781206271464,50.9223287406056,58.5483788420485,46.3098886577194,24.7016727509752,53.1992128630356,48.3496852179508,43.3324326309355,66.3723749438985,37.9101200820094,77.1378177401282,40.979968123181,171.681306513909,13.3008816258987,74.6730580671587,50.2914493928574,94.4664416229414,37.8039770977135,62.1546257684403,17.9652418201075,78.6491838477404,94.8940999958723,44.9499736769572,42.4449562104914,62.8006516223133,182.254902643079,21.7188325142123,35.8673674461403,9.54937472133108,71.745052250921,48.1179790115378,54.92942507415,33.6160950190923,32.5102380848902,62.9636089831901,19.4999849698992,68.7359059293514,57.7896441363516,61.4147681015336,39.1958637459702,40.4806976288072,36.5055169657947,104.63238039207,63.0191442604813,105.007850875671,25.5483245489341,21.1923346133283,37.3976284275352,20.5292051161634,16.2731903483724,17.2856234585118,14.8007911524864,34.1713644807814,82.2892451659305,75.4135573695262,77.7441892886674,26.183025408793,50.7583584850037,68.6430700545912,83.7111298559067,43.5886059160514,38.6755128902554,33.2061799427348,52.6402848579088,42.5366153068358,92.3001916157836,21.3472103382329,150.466091958777,62.6373379197959,48.9284659533244,59.2854508638453,29.3829851165271,58.4475861563514,49.0054347291246,41.4752765588989,110.9971967421,89.0368361305092,83.5061562963219,124.251326963877,104.451703392934,43.8211966721518,43.3899345837827,52.7199098089352,62.943806357631,52.9421804773351,55.0355303909173,26.3177221106312,27.9932084440091,32.2713746219112,63.6247948164031,102.288850835449,43.6142829706428,33.3011876891605,28.8136186969335,52.6112714393352,80.1760669212692,29.4182870323129,59.33993253754,53.1493561488466,56.9157147758719,42.4930771775547,24.7096796921229,35.4374803050848,81.5096633309237,48.7886651656766,45.3920048285871,47.8035007647363,19.7876542214464,42.7646873054248,76.2533766661433,64.0717173214528,17.8845223293761,45.5551367905155,19.7165515709486,56.4150450569954,39.6447533540213,53.1226038186842,31.1499240778426,35.6257619953354,71.861209296283,45.2816604560535,75.3026756603624,45.433420315707,36.8705293197807,36.2629776877132,35.5890711550096,48.2294659422269,24.2165729708144,54.0756189070326,52.5745147590682,48.0651913910407,48.9640394286152,39.0513917747434,135.884230497106,109.879877547229,42.9499365572234,31.530860634331,72.3436393006639,36.0887566368787,44.1409406651119,26.3552388819282,39.7264458451252,67.1813606790965,72.168024769832,30.7664930562247,63.5309534051844,56.1743969280824,82.9531894677899,57.470491949994,41.4567229784162,31.521784030303,25.268596408988,71.8105945022604,45.0523422301552,102.779950307433,64.39727704869,121.984915411527,69.7766872093505,68.2371566307569,63.3533349551654,52.1941209737466,42.6702778758278,26.6775703062225,30.9353199887476,25.5336503108073,67.4582076178148,72.4493793725603,66.7833357344346,72.131978756157,48.2156075488219,69.1133180374249,59.4267910072561,49.9511813518934,98.0529724630022,68.4432247982379,60.3577036590247,20.3372493356259,31.1201215825645,55.0486296676182,55.3802747077237,40.9362526274819,22.4800754787303,23.187364577732,28.6569221542798,43.2369623217365,24.411457906115,50.0023933926235,44.2759507084532,43.6007498582303,44.6238133374001,39.4712711022054,28.6004449072316,42.7301383470042,58.4619135490788,63.8720419272318,45.0262574941152,41.4706207840855,54.4975514843889,60.5224271701611,68.5174697027316,105.483043770756,62.2512221803132,52.008716531932,48.5495717832048,75.173469100316,66.8801093013675,42.0029152896311,41.2074846219351,42.4304355845058,119.875653317218,62.7940647127809,138.529268028202,54.5478070207292,53.7293043464086,57.8806185809585,42.0947131751124,52.8312081190388,15.7488738052096,42.9796737174266,47.529380259442,77.9372714614496,39.8704159941251,66.1103117956903,35.5793251983135,60.4681312792991,54.6120822799337,32.1519509584991,34.6777233217878,47.7610951227065,49.4690871758083,66.6044582722579,53.4619672097326,13.5991429181352,36.0618046366196,37.370650586397,45.4012762853469,188.340387107633,81.5497530004361,74.0271939439238,23.9162474337829,32.7787426645913,40.8891448825331,4.36838552768056,25.9690770829659,31.2485132549474,23.2999236806924,26.8149560627157,30.8464220133816,17.0341369202707,41.6296789108444,35.6202703127591,32.7682660767924,47.4653973462836,58.0955962934898,56.989287683403,86.3539893453579,38.5669695219229,32.9880094254319,52.9640117672472,159.901750690253,52.3127339610467,58.5129827804792,39.0702914851176,297.01648767252,71.6998339478274,65.5841929757096,43.3637364213479,55.5052223217519,28.2387096184928,40.6387285841208,69.4052740375769,43.0720143051554,109.561359886831,55.7185073101756,64.0484040863355,53.5318802938067,47.625273455624,39.92916105833,40.0228169805743,49.6211178389294,24.2702317216276,80.3625669853054,47.1417615572892,37.3274931662895,123.820983264273,104.496945830246,99.4353569523181,38.0272158934072,47.3306906047275,75.1745246723759,40.2529374204636,37.9402229237538,153.499334611055,54.0817409740042,52.4766070319446,92.4898138935504,44.7447773049653,33.6847042301049,30.5761080247712,39.3835758413376,20.225742301789,30.1065291703444,30.7729141975566,32.8701659539404,37.0916933851836,34.8265693271658,67.743446857781,28.3950056821383,108.983772672851,102.937792949062,64.3548316290212,50.403511079691,75.6903581020941,42.9992522539845,26.397881904279,59.4790415708372,121.308335357358,64.7428837187895,57.1831834189296,33.6346185088078,74.3137819380483,24.7975831269832,35.6121887538849,115.233567963464,51.0516290816099,17.4805421625232,37.1368595174017,108.352517983554,60.1038791385883,17.4017399653763,58.5904488991834,50.6704576268496,123.674334282416,86.143456094855,53.2546216755084,47.9194463419644,52.2550583967986,27.3946023887703,33.4802872348512,64.636525775248,52.2284410139224,42.7686484453267,65.7302749421866,42.6618233566223,71.2397728262713,49.8558136530463,30.6641620761025,32.7263017755283,53.9607377325708,33.4795516350076,41.1336309481962,42.8300296502551,35.200432528987,29.064642142343,28.127067224539,45.0790627459559,48.0991329478009,46.4069242650967,42.3695741404114,45.7703337238166,37.2470140917088,97.0128244166772,67.12801431437,51.3893896381364,49.7554661759217,29.1295983360388,29.9820870048994,36.55498720128,75.4218825596254,66.4965551672541,64.0087238817066,40.7257628291484,38.9294866424316,63.1155407455552,48.2357516991719,106.394072074544,51.8694900965697,44.4066249259962,46.2599790848922,44.5817790566563,42.0510567989061,48.4206452195729,51.92902838647,37.6381994015219,29.1717327995942 | |||
|short_description=p1@CHMP2B | |||
}} |
Revision as of 19:58, 21 January 2014
Short description: | p1@CHMP2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CHMP2B_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000263780, ENST00000471660, ENST00000472024, ENST00000494980, NM_001244644, NM_014043, uc003dqp.3, uc011bgn.1_5end |
EntrezGene: | CHMP2B |
HGNC: | 24537 |
UniProt: | Q9UQN3B4DJG8C9J0A7B2RE76 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.22e-26 | 72 |
defensive cell | 1.32e-25 | 48 |
phagocyte | 1.32e-25 | 48 |
classical monocyte | 8.88e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.88e-24 | 42 |
macrophage dendritic cell progenitor | 4.89e-23 | 61 |
granulocyte monocyte progenitor cell | 4.84e-22 | 67 |
monopoietic cell | 6.29e-22 | 59 |
monocyte | 6.29e-22 | 59 |
monoblast | 6.29e-22 | 59 |
promonocyte | 6.29e-22 | 59 |
myeloid lineage restricted progenitor cell | 2.55e-21 | 66 |
leukocyte | 1.26e-10 | 136 |
myeloid cell | 4.95e-10 | 108 |
common myeloid progenitor | 4.95e-10 | 108 |
hematopoietic lineage restricted progenitor cell | 4.17e-09 | 120 |
nongranular leukocyte | 4.26e-08 | 115 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.61e-18 | 76 |
bone element | 1.46e-16 | 82 |
skeletal element | 2.87e-16 | 90 |
skeletal system | 1.89e-14 | 100 |
hematopoietic system | 9.47e-13 | 98 |
blood island | 9.47e-13 | 98 |
immune system | 8.35e-12 | 93 |
hemolymphoid system | 7.42e-10 | 108 |
adult organism | 2.19e-08 | 114 |