FFCP PHASE1:Hg19::chr3:71630690..71630750,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27086 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3823 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=353bp_to_ENST00000498154_5end | |||
|description=CAGE_peak_11_at_FOXP1_5end | |||
|id=chr3:71630690..71630750,- | |||
|ontology_enrichment_celltype=CL:0000763!5.40e-13!112;CL:0000049!5.40e-13!112;CL:0002057!1.24e-12!42;CL:0000766!1.05e-11!76;CL:0000557!6.11e-11!71;CL:0000839!2.02e-10!70;CL:0000037!2.32e-10!172;CL:0000566!2.32e-10!172;CL:0000860!2.82e-10!45;CL:0000988!7.05e-10!182;CL:0000738!3.78e-09!140;CL:0002032!8.15e-09!165;CL:0000837!8.15e-09!165;CL:0002009!3.20e-08!65;CL:0002194!1.01e-07!63;CL:0000576!1.01e-07!63;CL:0000040!1.01e-07!63;CL:0000559!1.01e-07!63 | |||
|ontology_enrichment_celltype_v019=CL:0000576;4.40e-09;48!CL:0000766;6.24e-08;69!CL:0000860;1.12e-07;33!CL:0002057;1.12e-07;33!CL:0000236;2.91e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.40e-14,72;CL:0000763,5.12e-14,108;CL:0000049,5.12e-14,108;CL:0000860,1.99e-13,42;CL:0002057,1.99e-13,42;CL:0000557,4.20e-13,67;CL:0000037,9.22e-13,168;CL:0000738,9.32e-13,136;CL:0000839,1.94e-12,66;CL:0000988,1.55e-11,177;CL:0002032,6.55e-11,161;CL:0000837,6.55e-11,161;CL:0000473,4.11e-10,48;CL:0000234,4.11e-10,48;CL:0002009,1.26e-09,61;CL:0002194,5.46e-09,59;CL:0000576,5.46e-09,59;CL:0000040,5.46e-09,59;CL:0000559,5.46e-09,59;CL:0002031,1.02e-08,120;CL:0002393,1.66e-07,9;CL:0002397,1.66e-07,9;CL:0000134,2.95e-07,354;CL:0002087,7.56e-07,115 | |||
|ontology_enrichment_development_v019=CL:0002057;1.57e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.27e-11!102;UBERON:0003061!7.27e-11!102;UBERON:0002371!7.25e-09!80;UBERON:0002193!1.18e-08!112;UBERON:0001474!5.86e-08!86;UBERON:0007023!1.07e-07!115;UBERON:0003080!1.55e-07!42;UBERON:0001893!2.98e-07!34;UBERON:0001869!3.32e-07!32;UBERON:0002780!3.68e-07!41;UBERON:0001890!3.68e-07!41;UBERON:0006240!3.68e-07!41;UBERON:0002791!5.78e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0002791;2.46e-07;32!UBERON:0005631;4.30e-07;10!UBERON:0000158;4.30e-07;10!UBERON:0001869;5.62e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.63e-13,98;UBERON:0003061,9.63e-13,98;UBERON:0002371,3.01e-11,76;UBERON:0002193,3.66e-10,108;UBERON:0001474,3.23e-09,82;UBERON:0001869,2.13e-08,32;UBERON:0002791,3.38e-08,32;UBERON:0003081,3.60e-08,203;UBERON:0001893,4.64e-08,34;UBERON:0002780,1.14e-07,41;UBERON:0001890,1.14e-07,41;UBERON:0003080,1.14e-07,41;UBERON:0006240,1.14e-07,41;UBERON:0004765,2.07e-07,90;UBERON:0003528,3.06e-07,34;UBERON:0002020,3.06e-07,34;UBERON:0002405,3.15e-07,93;UBERON:0007023,4.18e-07,114 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.281908808191942,0,0.893922188854576,0.872338524100369,0,0,0,0,0.697801167972428,2.83973783769224,2.11013582582763,0.247532705920093,0,1.34465029290355,1.80808358407193,1.46062018077475,1.95173119516203,0.369363174230364,1.42800483870977,0.940364164434263,0.572471974262113,0,0.125542639594803,0,0,0,1.18009283054671,2.30297638858328,2.47705797305722,0.919421224478927,0.30120591877825,0,5.03536803771961,3.41206157969812,2.05520307534393,5.53995408531877,5.01361118675354,4.12320654360118,1.11957737119962,0,1.28787783817093,1.30858414901608,2.26725566213286,3.15359279544161,0.464858073811369,2.87817521615278,0.619412741790207,1.43846196161075,2.81776777182011,1.18241114944293,1.72372840368309,1.29096936716765,5.41705946377367,1.12945403725563,1.36453075028923,0.898893937780338,1.83650335422542,2.88836124368484,1.91801137739712,1.31940520074686,2.19410023383795,1.70489900213078,0.870627715885752,1.13477044938228,1.24564449799115,1.25624332628372,3.12889751052121,2.6062661364614,0.605399502633369,1.10483290796269,1.89877432464531,2.11255286311942,2.33864729961548,2.51590374610051,4.6054738770063,5.10601435661121,8.67918168164233,4.84521664360123,4.77400025277816,4.38393969035121,0,3.82297027883492,7.11607403090844,5.12076267079809,7.20712776664822,4.59801951963587,3.30522436392431,6.67837628174755,3.98449078376614,7.6340834618222,5.3518251937532,6.60856642895129,4.48406850385229,0.526768169550154,0.393419540227666,0.786021525498329,1.23360899399706,1.17030546773475,0.651844533267181,0.946895611469467,0,0.668462741311041,1.17842362989935,1.77227115666897,2.16643091012012,2.5618263945135,2.34106825607781,1.31550323682941,0.552700035571697,1.73881851441031,0.889719378972363,2.1403266247177,0,0.113309342697566,0.766440987203842,0,0,0,0,0,0.301150238155546,0.383959833463255,1.24930726552346,0.236777252044017,0.821127996921047,0.201606743224732,0,0,0,0,0,0,0.50133791063589,0.579386075843295,1.5905718941022,0.973269740605272,2.26883561193763,1.77383517970051,2.28370442802128,0.785874452986276,0,0,0.649094787309367,1.91542711029194,0.797747763113191,2.8618874916641,5.14795419702115,3.71457501329565,0,0,0,0.56530794192401,0.419499436209906,0,0,0.775250277507987,0,0.33472061276467,0,0,0.24406205754817,0.367663080345869,0,0.625098097988558,1.34717623575702,1.0135033243499,0,0,0,2.63560834872127,3.87780264148325,0,1.98788780678127,1.01304409331664,1.19168262731897,3.44203944898576,0.709336764396714,0,4.2699598291882,2.22000793575444,0,0.67355336034844,0,1.51357427644931,0.576175924479999,0.234321431833797,0,0,0,0,0,0,0,0.982674538494144,0,1.18800285728205,2.47266929278557,0,0,0,0,0,0.438977620880838,0.612975591598039,2.85452311922534,0.226864366320042,2.33206526395521,1.2813443329114,1.27159140695737,3.90118424909723,1.33968288009971,3.60696756063881,0.930584281657949,2.53164498361899,1.55899208257918,3.02920529092937,1.19664868234989,1.2931684545505,4.61512470271599,1.41052937518696,0.847802961552438,0.386521706326594,1.09098448236334,0.286804595389004,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0.709840800239063,0.168584690078102,0,0.661763836394364,0.435758888184812,0,0.269662616320329,0.196221465125346,0.769494313892781,0,1.40241773803446,0,1.47008711385542,0,0,0,0.441463099414651,0.737930631258681,0.686271241194102,0.329250856225877,0,0.100528972411631,0.277765335475589,0.651616610620649,0,0,0.34779121492523,1.76113041353732,0.144366447761074,0,0.190254152234598,0,0,0.246217006087397,0,0.594524649154913,0.93733833986777,1.17587489739202,0.141775097242386,0.447792613514241,0,0.766765358330422,14.2872338989824,3.96217953059517,6.84182781284548,4.90007841617669,11.3618190083742,0,0,0,0,0,0,0,0.112131084345361,0,0,2.58543431515556,0,0,1.06375246633948,2.08014873822732,0,0,0.266422179016099,0.142977993658148,0,0,0,0.710783897485092,0.791951872933429,1.50719688529793,1.74306691720059,2.49932477955143,0,0,0,0.718874566474748,1.14861935834114,4.27910715122155,0.144781306667579,0.205476322550383,0.179060963239896,0,0.591092280605782,0.646882724578552,0.256686072559497,0,0,0,0,0,4.49404214368309,0,2.90090859405225,0.36807447515742,0,0.271265023699736,0.623912584592421,1.07057393278297,1.89242898040722,0.702848489956279,0.902838299183157,0,0,0.664225598535437,1.29058417979192,0,0,0.343143423810856,2.27444828735176,2.80428461064202,2.24127871387233,1.21251028578504,0,3.93107381328584,1.24053903909388,3.22270143904931,1.12264037773229,1.53766979106841,1.02341449813341,1.44768529029247,1.48418066444991,0.616838775210622,0.355123450626254,0.246381468041427,0.519254429183621,0.348631135379878,0.725156697549733,1.00253235151642,0.368323955743585,0.114814448164607,0.364182336013434,1.18011973463482,0,0.539107359730903,2.35304930753057,1.46139224653261,0.73886140225013,0,0,1.0795795805107,0,0.812839312631559,0.501689773854853,0.254876273045038,0,1.34324852833307,1.31555925987561,2.61435451024901,0,0,0,0.309123034943167,0.366277859273374,0.082509499920588,1.14853107599234,0.6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| |||
|short_description=p11@FOXP1 | |||
}} |
Revision as of 19:47, 21 January 2014
Short description: | p11@FOXP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_FOXP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 353bp_to_ENST00000498154_5end |
EntrezGene: | FOXP1 |
HGNC: | 3823 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.40e-14 | 72 |
myeloid cell | 5.12e-14 | 108 |
common myeloid progenitor | 5.12e-14 | 108 |
classical monocyte | 1.99e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.99e-13 | 42 |
granulocyte monocyte progenitor cell | 4.20e-13 | 67 |
hematopoietic stem cell | 9.22e-13 | 168 |
leukocyte | 9.32e-13 | 136 |
myeloid lineage restricted progenitor cell | 1.94e-12 | 66 |
hematopoietic cell | 1.55e-11 | 177 |
hematopoietic oligopotent progenitor cell | 6.55e-11 | 161 |
hematopoietic multipotent progenitor cell | 6.55e-11 | 161 |
defensive cell | 4.11e-10 | 48 |
phagocyte | 4.11e-10 | 48 |
macrophage dendritic cell progenitor | 1.26e-09 | 61 |
monopoietic cell | 5.46e-09 | 59 |
monocyte | 5.46e-09 | 59 |
monoblast | 5.46e-09 | 59 |
promonocyte | 5.46e-09 | 59 |
hematopoietic lineage restricted progenitor cell | 1.02e-08 | 120 |
intermediate monocyte | 1.66e-07 | 9 |
CD14-positive, CD16-positive monocyte | 1.66e-07 | 9 |
mesenchymal cell | 2.95e-07 | 354 |
nongranular leukocyte | 7.56e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.63e-13 | 98 |
blood island | 9.63e-13 | 98 |
bone marrow | 3.01e-11 | 76 |
hemolymphoid system | 3.66e-10 | 108 |
bone element | 3.23e-09 | 82 |
cerebral hemisphere | 2.13e-08 | 32 |
regional part of telencephalon | 3.38e-08 | 32 |
lateral plate mesoderm | 3.60e-08 | 203 |
telencephalon | 4.64e-08 | 34 |
regional part of forebrain | 1.14e-07 | 41 |
forebrain | 1.14e-07 | 41 |
anterior neural tube | 1.14e-07 | 41 |
future forebrain | 1.14e-07 | 41 |
skeletal element | 2.07e-07 | 90 |
brain grey matter | 3.06e-07 | 34 |
gray matter | 3.06e-07 | 34 |
immune system | 3.15e-07 | 93 |
adult organism | 4.18e-07 | 114 |