FFCP PHASE1:Hg19::chr3:49837254..49837283,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=389118 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=34527 | |||
|TSSclassifier=strong | |||
|UniProt=A6H8M9,E9PFE8 | |||
|association_with_transcript=0bp_to_ENST00000343366,ENST00000412678,ENST00000487256,NM_001007540,uc003cxp.2,uc010hkz.2,uc011bcw.1_5end | |||
|coexpression_cluster_id=C81 | |||
|description=CAGE_peak_1_at_CDHR4_5end | |||
|id=chr3:49837254..49837283,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002623;1.59e-11;3!CL:0002537;1.63e-07;5!CL:0000622;2.94e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,1.97e-11,3;CL:0002537,1.66e-07,5;CL:0000622,3.34e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.13e-09;29!UBERON:0000358;2.88e-09;1 | |||
|ontology_enrichment_disease=DOID:7!3.59e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;8.35e-18;2!UBERON:0000341;2.44e-17;2!UBERON:0001301;9.43e-10;1!UBERON:0002171;1.37e-09;1!UBERON:0006518;1.37e-09;1!UBERON:0008949;1.37e-09;1!UBERON:0000101;1.37e-09;1!UBERON:0002167;1.37e-09;1!UBERON:0007195;4.68e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,8.35e-18,2;UBERON:0000341,2.25e-17,2;UBERON:0001301,9.44e-10,1;UBERON:0002171,1.32e-09,1;UBERON:0006518,1.32e-09,1;UBERON:0008949,1.32e-09,1;UBERON:0000101,1.32e-09,1;UBERON:0002167,1.32e-09,1;UBERON:0007195,5.28e-09,1;UBERON:0005178,3.62e-08,34;UBERON:0002224,3.62e-08,34;UBERON:0005181,6.41e-08,35;UBERON:0008947,2.97e-07,38;UBERON:0003258,2.97e-07,38 | |||
|phase1_expression=0,0,0.704772020479856,0,0.446961094427288,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.916853528483988,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0.300091096084402,0,0.515281080091258,0,0.675105328965065,0,0,0,0,0.710019185033229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0.110293972732394,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0,0,0,0,0,0,0.542621605391443,0,0.325736184293735,0.710783897485092,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.713715955188647,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0.606255142892519,0,0,0,0.460385919864187,0,0.896974044789907,0.511707249066704,0,0,0,0,0.246381468041427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824328093181778,0,0.082509499920588,0,0,0,0,0,0,0,0.322260734604821,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0.633322905892992,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0.343505344755765,0,0,0.166849141711909,0.19538809540204,0,0,0,0,0,0,0,0,0.66866030566487,0,4.05865624054073,0,8.6004996587785,0,0,0.111308705022906,0,0,6.5751836122853,0,0,0,0,0,0.269605053441981,0,0,0,0,1.11136990144637,0,0,0,0.260427761085233,0,0,0,0.254253650292766,0.236387681767936,0,0,0,2.65722415744152,0.723578631752448,0,0,0,0,0.10893846351899,0.557694977114413,0.153900517007594,0.113942055847001,0,0,0,0.957003479195758,0,0,0,0.31396051279005,0,0,0,0,0,0,0,1.14262965711403,0,0,0,0,0,0.296521128680622,0,0,0.741412462787447,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0.103688191397247,0,0,0,0,0,0,0.173559738335131,0.0979923974143777,0,13.4539534546363,0,0.0967563312890851,0.292357268344742,0.246346371159628,0.0969890164884194,0,0,0.274083849293502,0,0,0.195551382734803,0,0,1.59847687665704,0.144090417154106,0,0,0,0,0.235694034616795,0.271808412147228,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0.429226048136571,0,0,0,0,0.0787831823072236,0.0824158583811665,0.0674035438541849,0,0,0,0.136203406111576,0,0,0,0,1.5476039091159,0,0,0.0788057072991982,0,0,0,0.191915197319445,0,0,0.25426853765475,0,0,0,0,0,0.170388021785422,0,0,0,1.68067843270016,0,1.02652102730598,0,2.56289790162467,14.3055917640696,6.62782488555513,0,0,0,0,0,0,0,0,0,0,0,0,4.58727356552057,0.221858103073705,0.683060432355218,0.138348634936231,0,0,0,0,0,0,0.298509605773748,0,0,0,0,0.889811221596536,0,0.151230923763239,0,0.147855149989634,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0.464033759878494,0,0.400027764663154,0,0,0,0,0,0,0,0.231522474323834,0,0.179088841081487,0,0.219284049578707,0.176689145945881,0.192914038270915,0,0,0.345430341731199,0.303859956177382,0,0,0,0,0,0.245772908753719,0,0,0.853533837553127,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0.6124909547064,0.256916900385838,0,0,0,0.252071696221718,0,0,0,0.490738592505128,0,0,0,0.381382095467167,0,0,3.45967510406583,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0.443511850813194,0,0.171488009437418,0,0,0.354581522651905,0,0,0,0,0,0.431855182437243,0.47775168788705,0,0,0,0,0,0.207216164163037,2.0486217251274,2.07377898544228,0,0,0.0852134047591577,0,2.97838929107265,0,0,0,0,0.121917924982269,0,0.102662806856247,0,0.485710993059139,0,0.198950775161368,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0.4226557275834,0,0,0,0,0,0.352894871715692,0.160482733378337,0,0,0,0,0,0,0,0.743990036333503,0,0.865253124247578,0.126166424835079,0,0,0,0,0,0,0.909344378618873,0,0,0,3.83821167421766,7.85612623830343,0,0,0.112131862580613,0,0,0.435433495793923,0.342233301085281,0.134704106029175,16.5678294457082,9.64715033983439,0,0,0,0.0898252021065869,2.34640942403454,0.733448665097199,0,0,0,0 | |||
|short_description=p1@CDHR4 | |||
}} |
Revision as of 18:57, 21 January 2014
Short description: | p1@CDHR4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CDHR4_5end |
Coexpression cluster: | C81_trachea_salivary_throat_aorta_eye_submaxillary_parotid |
Association with transcript: | 0bp_to_ENST00000343366, ENST00000412678, ENST00000487256, NM_001007540, uc003cxp.2, uc010hkz.2, uc011bcw.1_5end |
EntrezGene: | CDHR4 |
HGNC: | 34527 |
UniProt: | A6H8M9E9PFE8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 1.97e-11 | 3 |
amnion mesenchymal stem cell | 1.66e-07 | 5 |
acinar cell | 3.34e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 8.35e-18 | 2 |
throat | 2.25e-17 | 2 |
epididymis | 9.44e-10 | 1 |
lower lobe of right lung | 1.32e-09 | 1 |
right lung lobe | 1.32e-09 | 1 |
lower lobe of lung | 1.32e-09 | 1 |
lobe of lung | 1.32e-09 | 1 |
right lung | 1.32e-09 | 1 |
stroma of bone marrow | 5.28e-09 | 1 |
thoracic cavity element | 3.62e-08 | 34 |
thoracic cavity | 3.62e-08 | 34 |
thoracic segment organ | 6.41e-08 | 35 |
respiratory primordium | 2.97e-07 | 38 |
endoderm of foregut | 2.97e-07 | 38 |