FFCP PHASE1:Hg19::chr3:49591881..49591940,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8927 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1117 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UPA5 | |||
|association_with_transcript=0bp_to_ENST00000296452,NM_003458,uc003cxe.3_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_BSN_5end | |||
|id=chr3:49591881..49591940,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,3.17e-08,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.03e-16;82 | |||
|ontology_enrichment_disease=DOID:0050687!1.55e-09!143;DOID:162!4.29e-09!235;DOID:14566!2.00e-08!239 | |||
|ontology_enrichment_disease_v019=DOID:171;5.82e-08;10!DOID:169;9.48e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.14e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0001017!2.60e-35!82;UBERON:0000073!1.26e-34!94;UBERON:0001016!1.26e-34!94;UBERON:0005743!5.14e-33!86;UBERON:0001049!9.29e-31!57;UBERON:0005068!9.29e-31!57;UBERON:0006241!9.29e-31!57;UBERON:0007135!9.29e-31!57;UBERON:0000955!2.47e-28!69;UBERON:0006238!2.47e-28!69;UBERON:0002616!1.31e-25!59;UBERON:0002346!2.56e-24!90;UBERON:0007023!6.85e-24!115;UBERON:0002780!1.72e-23!41;UBERON:0001890!1.72e-23!41;UBERON:0006240!1.72e-23!41;UBERON:0003075!7.59e-23!86;UBERON:0007284!7.59e-23!86;UBERON:0003080!2.53e-22!42;UBERON:0001893!3.74e-19!34;UBERON:0002020!3.96e-19!34;UBERON:0003528!3.96e-19!34;UBERON:0002791!1.91e-18!33;UBERON:0001869!4.33e-18!32;UBERON:0000924!2.27e-17!173;UBERON:0006601!2.27e-17!173;UBERON:0004121!3.68e-16!169;UBERON:0002619!2.48e-15!22;UBERON:0003056!5.04e-15!61;UBERON:0001950!5.52e-14!20;UBERON:0000153!1.47e-13!129;UBERON:0007811!1.47e-13!129;UBERON:0000956!1.69e-13!25;UBERON:0000203!1.69e-13!25;UBERON:0000033!3.17e-13!123;UBERON:0003076!1.58e-09!15;UBERON:0003057!1.58e-09!15;UBERON:0004732!1.75e-08!13;UBERON:0004733!5.78e-08!12;UBERON:0002028!5.78e-08!12;UBERON:0007277!5.78e-08!12;UBERON:0002420!2.28e-07!9;UBERON:0007245!2.28e-07!9;UBERON:0010009!2.28e-07!9;UBERON:0010011!2.28e-07!9;UBERON:0000454!2.28e-07!9;UBERON:0002308!3.48e-07!9;UBERON:0000125!3.48e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;3.80e-30;53!UBERON:0002616;3.80e-30;53!UBERON:0002780;9.50e-30;41!UBERON:0001890;9.50e-30;41!UBERON:0001893;1.30e-28;34!UBERON:0003528;2.55e-28;34!UBERON:0002020;2.55e-28;34!UBERON:0001869;3.69e-28;32!UBERON:0002791;7.26e-28;32!UBERON:0002619;1.76e-27;22!UBERON:0001950;5.02e-25;20!UBERON:0000956;2.80e-23;25!UBERON:0000203;2.80e-23;25!UBERON:0001016;5.65e-22;83!UBERON:0000955;5.68e-22;68!UBERON:0001017;2.59e-21;75!UBERON:0004732;9.01e-13;13!UBERON:0002420;4.06e-12;9!UBERON:0007245;4.06e-12;9!UBERON:0010009;4.06e-12;9!UBERON:0010011;4.06e-12;9!UBERON:0000454;4.06e-12;9!UBERON:0004733;7.76e-12;12!UBERON:0002028;7.76e-12;12!UBERON:0000125;8.88e-12;9!UBERON:0002308;8.88e-12;9!UBERON:0009663;1.48e-09;7!UBERON:0007023;1.73e-09;114!UBERON:0000200;2.71e-09;6!UBERON:0001894;2.84e-09;7!UBERON:0002680;7.02e-09;9!UBERON:0001895;7.02e-09;9!UBERON:0002298;5.43e-08;6!UBERON:0000349;6.64e-08;5!UBERON:0001872;8.06e-08;5!UBERON:0001871;1.03e-07;6!UBERON:0002021;1.06e-07;5!UBERON:0011216;1.27e-07;132!UBERON:0000922;9.43e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.25e-62,89;UBERON:0001017,4.80e-60,81;UBERON:0001049,1.46e-55,56;UBERON:0005068,1.46e-55,56;UBERON:0006241,1.46e-55,56;UBERON:0007135,1.46e-55,56;UBERON:0000073,1.76e-52,53;UBERON:0002616,1.76e-52,53;UBERON:0000955,2.11e-47,68;UBERON:0006238,2.11e-47,68;UBERON:0002346,1.21e-43,86;UBERON:0003075,4.74e-42,82;UBERON:0007284,4.74e-42,82;UBERON:0002780,1.71e-41,41;UBERON:0001890,1.71e-41,41;UBERON:0003080,1.71e-41,41;UBERON:0006240,1.71e-41,41;UBERON:0001893,1.43e-33,34;UBERON:0003528,1.59e-33,34;UBERON:0002020,1.59e-33,34;UBERON:0010371,1.49e-32,104;UBERON:0001869,1.25e-31,32;UBERON:0004121,2.13e-31,171;UBERON:0000924,2.13e-31,171;UBERON:0006601,2.13e-31,171;UBERON:0002791,3.04e-31,32;UBERON:0003056,1.66e-30,61;UBERON:0007023,9.70e-30,114;UBERON:0002619,1.84e-27,22;UBERON:0010314,1.31e-25,132;UBERON:0011216,4.09e-25,223;UBERON:0001950,5.33e-25,20;UBERON:0000956,2.91e-23,25;UBERON:0000203,2.91e-23,25;UBERON:0003076,1.11e-14,15;UBERON:0003057,1.11e-14,15;UBERON:0000025,1.80e-14,192;UBERON:0004732,8.65e-13,13;UBERON:0002420,4.16e-12,9;UBERON:0007245,4.16e-12,9;UBERON:0010009,4.16e-12,9;UBERON:0010011,4.16e-12,9;UBERON:0000454,4.16e-12,9;UBERON:0004733,7.48e-12,12;UBERON:0002028,7.48e-12,12;UBERON:0007277,7.48e-12,12;UBERON:0000125,8.94e-12,9;UBERON:0002308,8.94e-12,9;UBERON:0009663,1.51e-09,7;UBERON:0000200,2.75e-09,6;UBERON:0001894,2.90e-09,7;UBERON:0006222,2.90e-09,7;UBERON:0002680,6.57e-09,9;UBERON:0001895,6.57e-09,9;UBERON:0010092,6.57e-09,9;UBERON:0004111,2.06e-08,240;UBERON:0002298,5.56e-08,6;UBERON:0000349,6.58e-08,5;UBERON:0001872,8.26e-08,5;UBERON:0001871,1.04e-07,6;UBERON:0002021,1.08e-07,5 | |||
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| |||
|short_description=p1@BSN | |||
}} |
Revision as of 18:56, 21 January 2014
Short description: | p1@BSN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BSN_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000296452, NM_003458, uc003cxe.3_5end |
EntrezGene: | BSN |
HGNC: | 1117 |
UniProt: | Q9UPA5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 3.17e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.14e-07 | 10 |