FFCP PHASE1:Hg19::chr3:18466787..18466839,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6304 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10541 | |||
|TSSclassifier=strong | |||
|UniProt=Q01826 | |||
|association_with_transcript=0bp_to_ENST00000338745,NM_001195470,NM_002971,uc003cbh.2,uc003cbi.2_5end | |||
|description=CAGE_peak_1_at_SATB1_5end | |||
|id=chr3:18466787..18466839,- | |||
|ontology_enrichment_celltype=CL:0000037!2.83e-14!172;CL:0000566!2.83e-14!172;CL:0000988!2.78e-13!182;CL:0000738!8.84e-13!140;CL:0002032!1.64e-12!165;CL:0000837!1.64e-12!165;CL:0002087!1.60e-10!119;CL:0002031!2.82e-10!124;CL:0000766!5.36e-10!76;CL:0000763!1.55e-09!112;CL:0000049!1.55e-09!112;CL:0002057!1.98e-08!42;CL:0000557!3.16e-08!71;CL:0000791!8.42e-08!18;CL:0000789!8.42e-08!18;CL:0002420!8.42e-08!18;CL:0002419!8.42e-08!18;CL:0000790!8.42e-08!18;CL:0000839!1.26e-07!70;CL:0002194!5.21e-07!63;CL:0000576!5.21e-07!63;CL:0000040!5.21e-07!63;CL:0000559!5.21e-07!63;CL:0000084!6.86e-07!25;CL:0000827!6.86e-07!25;CL:0002009!8.67e-07!65 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.25e-08;33!CL:0002057;6.25e-08;33!CL:0000791;7.11e-08;18!CL:0000789;7.11e-08;18!CL:0002419;7.11e-08;18!CL:0000084;7.80e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.24e-16,168;CL:0000988,2.23e-15,177;CL:0000738,8.36e-15,136;CL:0002032,1.77e-14,161;CL:0000837,1.77e-14,161;CL:0002087,1.82e-12,115;CL:0000766,2.51e-12,72;CL:0002031,3.79e-12,120;CL:0000763,1.81e-11,108;CL:0000049,1.81e-11,108;CL:0000557,2.40e-10,67;CL:0000839,1.18e-09,66;CL:0002194,4.77e-09,59;CL:0000576,4.77e-09,59;CL:0000040,4.77e-09,59;CL:0000559,4.77e-09,59;CL:0002009,9.62e-09,61;CL:0000860,1.62e-08,42;CL:0002057,1.62e-08,42;CL:0000473,5.19e-08,48;CL:0000234,5.19e-08,48;CL:0000791,7.02e-08,18;CL:0000789,7.02e-08,18;CL:0002420,7.02e-08,18;CL:0002419,7.02e-08,18;CL:0000790,7.02e-08,18;CL:0000084,8.39e-07,25;CL:0000827,8.39e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000790;7.11e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.01e-41!115;UBERON:0001049!3.63e-20!57;UBERON:0005068!3.63e-20!57;UBERON:0006241!3.63e-20!57;UBERON:0007135!3.63e-20!57;UBERON:0003080!1.13e-16!42;UBERON:0002780!1.37e-16!41;UBERON:0001890!1.37e-16!41;UBERON:0006240!1.37e-16!41;UBERON:0005743!7.54e-16!86;UBERON:0002616!9.38e-16!59;UBERON:0001017!1.62e-15!82;UBERON:0000073!1.80e-15!94;UBERON:0001016!1.80e-15!94;UBERON:0002619!4.65e-14!22;UBERON:0002020!5.44e-14!34;UBERON:0003528!5.44e-14!34;UBERON:0001893!6.08e-14!34;UBERON:0000955!6.15e-14!69;UBERON:0006238!6.15e-14!69;UBERON:0001869!1.10e-13!32;UBERON:0002791!2.09e-13!33;UBERON:0001950!3.42e-13!20;UBERON:0002390!1.44e-12!102;UBERON:0003061!1.44e-12!102;UBERON:0000956!7.69e-12!25;UBERON:0000203!7.69e-12!25;UBERON:0003075!2.25e-11!86;UBERON:0007284!2.25e-11!86;UBERON:0002346!6.51e-11!90;UBERON:0002193!1.10e-09!112;UBERON:0003056!3.93e-09!61;UBERON:0000153!9.85e-08!129;UBERON:0007811!9.85e-08!129;UBERON:0002371!3.55e-07!80 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.91e-14;22!UBERON:0001950;2.18e-13;20!UBERON:0001869;1.91e-12;32!UBERON:0002780;3.91e-12;41!UBERON:0001890;3.91e-12;41!UBERON:0003528;4.59e-12;34!UBERON:0002020;4.59e-12;34!UBERON:0001893;4.81e-12;34!UBERON:0002791;4.98e-12;32!UBERON:0000956;6.18e-12;25!UBERON:0000203;6.18e-12;25!UBERON:0007023;2.62e-11;114!UBERON:0000073;6.99e-11;53!UBERON:0002616;6.99e-11;53!UBERON:0001017;3.44e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.08e-41,114;UBERON:0001049,4.16e-20,56;UBERON:0005068,4.16e-20,56;UBERON:0006241,4.16e-20,56;UBERON:0007135,4.16e-20,56;UBERON:0000073,1.06e-18,53;UBERON:0002616,1.06e-18,53;UBERON:0002780,1.40e-16,41;UBERON:0001890,1.40e-16,41;UBERON:0003080,1.40e-16,41;UBERON:0006240,1.40e-16,41;UBERON:0001017,3.24e-15,81;UBERON:0002390,6.79e-15,98;UBERON:0003061,6.79e-15,98;UBERON:0001016,9.55e-15,89;UBERON:0002619,3.23e-14,22;UBERON:0003528,5.96e-14,34;UBERON:0002020,5.96e-14,34;UBERON:0001893,6.67e-14,34;UBERON:0001869,1.22e-13,32;UBERON:0000955,1.29e-13,68;UBERON:0006238,1.29e-13,68;UBERON:0001950,2.44e-13,20;UBERON:0002791,3.21e-13,32;UBERON:0003075,5.58e-12,82;UBERON:0007284,5.58e-12,82;UBERON:0000956,9.18e-12,25;UBERON:0000203,9.18e-12,25;UBERON:0002193,1.10e-11,108;UBERON:0002346,1.50e-11,86;UBERON:0002371,5.30e-09,76;UBERON:0003056,6.99e-09,61;UBERON:0001474,5.18e-08,82;UBERON:0002405,7.00e-08,93;UBERON:0004765,2.03e-07,90;UBERON:0010371,3.84e-07,104;UBERON:0001434,9.36e-07,100 | |||
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| |||
|short_description=p1@SATB1 | |||
}} |
Revision as of 17:46, 21 January 2014
Short description: | p1@SATB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SATB1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000338745, NM_001195470, NM_002971, uc003cbh.2, uc003cbi.2_5end |
EntrezGene: | SATB1 |
HGNC: | 10541 |
UniProt: | Q01826 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 2.24e-16 | 168 |
hematopoietic cell | 2.23e-15 | 177 |
leukocyte | 8.36e-15 | 136 |
hematopoietic oligopotent progenitor cell | 1.77e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.77e-14 | 161 |
nongranular leukocyte | 1.82e-12 | 115 |
myeloid leukocyte | 2.51e-12 | 72 |
hematopoietic lineage restricted progenitor cell | 3.79e-12 | 120 |
myeloid cell | 1.81e-11 | 108 |
common myeloid progenitor | 1.81e-11 | 108 |
granulocyte monocyte progenitor cell | 2.40e-10 | 67 |
myeloid lineage restricted progenitor cell | 1.18e-09 | 66 |
monopoietic cell | 4.77e-09 | 59 |
monocyte | 4.77e-09 | 59 |
monoblast | 4.77e-09 | 59 |
promonocyte | 4.77e-09 | 59 |
macrophage dendritic cell progenitor | 9.62e-09 | 61 |
classical monocyte | 1.62e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.62e-08 | 42 |
defensive cell | 5.19e-08 | 48 |
phagocyte | 5.19e-08 | 48 |
mature alpha-beta T cell | 7.02e-08 | 18 |
alpha-beta T cell | 7.02e-08 | 18 |
immature T cell | 7.02e-08 | 18 |
mature T cell | 7.02e-08 | 18 |
immature alpha-beta T cell | 7.02e-08 | 18 |
T cell | 8.39e-07 | 25 |
pro-T cell | 8.39e-07 | 25 |