FFCP PHASE1:Hg19::chr3:6221525..6221536,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C420 | |||
|description=CAGE_peak_at_chr3:6221525..6221536,- | |||
|id=chr3:6221525..6221536,- | |||
|ontology_enrichment_celltype=CL:0002573!7.64e-15!2;CL:0000064!2.59e-14!3;CL:0005012!2.59e-14!3;CL:0000067!2.59e-14!3;CL:0002304!2.59e-14!3;CL:0000306!6.02e-11!4;CL:0002222!6.02e-11!4;CL:0002224!6.02e-11!4;CL:0000243!7.77e-10!15;CL:0000125!7.77e-10!15;CL:0000030!7.77e-10!15;CL:0000339!7.77e-10!15;CL:0000095!8.10e-09!17;CL:0000123!8.10e-09!17 | |||
|ontology_enrichment_celltype_v019=CL:0002573;1.28e-53;2!CL:0000243;8.66e-22;15!CL:0000125;8.66e-22;15!CL:0000095;1.35e-19;17!CL:0002319;4.64e-14;25!CL:0000306;3.79e-11;4!CL:0002222;3.79e-11;4!CL:0002224;3.79e-11;4!CL:0000128;5.86e-07;7!CL:0000126;5.86e-07;7!CL:0000127;5.86e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002573,1.28e-53,2;CL:0000243,8.97e-22,15;CL:0000125,8.97e-22,15;CL:0000030,8.97e-22,15;CL:0000339,8.97e-22,15;CL:0000095,1.39e-19,17;CL:0000123,1.39e-19,17;CL:0002319,4.74e-14,25;CL:0000306,3.79e-11,4;CL:0002222,3.79e-11,4;CL:0002224,3.79e-11,4;CL:0000333,3.98e-09,41;CL:0000128,6.04e-07,7;CL:0000126,6.04e-07,7;CL:0000127,6.04e-07,7;CL:0002453,6.04e-07,7 | |||
|ontology_enrichment_development_v019=CL:0000339;8.66e-22;15 | |||
|ontology_enrichment_disease=DOID:3347!1.06e-11!1;DOID:6193!2.68e-11!1 | |||
|ontology_enrichment_disease_v019=DOID:3347;1.81e-40;1!DOID:201;6.55e-08;6!DOID:0060100;6.55e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3347,1.48e-40,1;DOID:201,6.34e-08,6;DOID:0060100,6.34e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0007625!8.91e-15!11;UBERON:0001778!2.59e-14!3;UBERON:0001775!2.59e-14!3;UBERON:0001801!1.16e-11!14;UBERON:0000488!5.72e-11!4;UBERON:0010077!6.02e-11!4;UBERON:0005389!6.02e-11!4;UBERON:0000484!6.02e-11!4;UBERON:0002546!6.02e-11!4;UBERON:0000965!6.02e-11!4;UBERON:0001803!6.02e-11!4;UBERON:0003073!6.02e-11!4;UBERON:0005426!6.02e-11!4;UBERON:0000019!1.22e-08!19;UBERON:0000047!1.22e-08!19;UBERON:0004088!1.22e-08!19;UBERON:0003072!1.22e-08!19;UBERON:0003071!1.22e-08!19;UBERON:0004128!1.22e-08!19;UBERON:0000970!3.23e-08!20;UBERON:0002104!7.82e-08!21;UBERON:0001456!7.82e-08!21;UBERON:0002203!1.34e-07!6;UBERON:0001768!1.34e-07!6;UBERON:0000020!3.65e-07!23;UBERON:0001032!7.16e-07!24;UBERON:0004456!7.16e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0000010;1.03e-18;8!UBERON:0010077;3.79e-11;4!UBERON:0005389;3.79e-11;4!UBERON:0000484;3.79e-11;4!UBERON:0000965;3.79e-11;4!UBERON:0001803;3.79e-11;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,1.03e-18,8;UBERON:0010077,3.79e-11,4;UBERON:0005389,3.79e-11,4;UBERON:0000484,3.79e-11,4;UBERON:0002546,3.79e-11,4;UBERON:0000965,3.79e-11,4;UBERON:0001803,3.79e-11,4;UBERON:0003073,3.79e-11,4;UBERON:0005426,3.79e-11,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472674085820339,0.443458794925128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44331342025273,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0.869932992075073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.667852230137435,0,0,0,0,0,2.35217969754956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343972064943233,0,0,0,0,0,0,0.822251547880505,0,0,0,0.320635281006135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.674921674654501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7614397042404,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.61494802849205,6.22057854741851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:6221525..6221536,- | |||
}} |
Revision as of 17:07, 21 January 2014
Short description: | p@chr3:6221525..6221536, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:6221525..6221536, - |
Coexpression cluster: | C420_schwannoma_salivary_Mammary_skin_squamous_Smooth_cervical |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Schwann cell | 1.28e-53 | 2 |
glial cell (sensu Vertebrata) | 8.97e-22 | 15 |
glial cell | 8.97e-22 | 15 |
glioblast | 8.97e-22 | 15 |
glioblast (sensu Vertebrata) | 8.97e-22 | 15 |
neuron associated cell | 1.39e-19 | 17 |
neuron associated cell (sensu Vertebrata) | 1.39e-19 | 17 |
neural cell | 4.74e-14 | 25 |
crystallin accumulating cell | 3.79e-11 | 4 |
vertebrate lens cell | 3.79e-11 | 4 |
lens epithelial cell | 3.79e-11 | 4 |
migratory neural crest cell | 3.98e-09 | 41 |
oligodendrocyte | 6.04e-07 | 7 |
macroglial cell | 6.04e-07 | 7 |
astrocyte | 6.04e-07 | 7 |
oligodendrocyte precursor cell | 6.04e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 1.03e-18 | 8 |
cuboidal epithelium | 3.79e-11 | 4 |
transparent eye structure | 3.79e-11 | 4 |
simple cuboidal epithelium | 3.79e-11 | 4 |
cranial placode | 3.79e-11 | 4 |
lens of camera-type eye | 3.79e-11 | 4 |
epithelium of lens | 3.79e-11 | 4 |
lens placode | 3.79e-11 | 4 |
lens vesicle | 3.79e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
osteosarcoma | 1.48e-40 | 1 |
connective tissue cancer | 6.34e-08 | 6 |
musculoskeletal system cancer | 6.34e-08 | 6 |