FFCP PHASE1:Hg19::chr22:43355858..43355906,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11252 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8571 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UNF0,B0QYG9,Q6FIA3 | |||
|association_with_transcript=0bp_to_ENST00000402229,ENST00000407585,ENST00000453079,NM_001184971,uc003bde.3,uc003bdf.3_5end | |||
|description=CAGE_peak_3_at_PACSIN2_5end | |||
|id=chr22:43355858..43355906,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.64e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.80e-29!115;UBERON:0001049!2.96e-10!57;UBERON:0005068!2.96e-10!57;UBERON:0006241!2.96e-10!57;UBERON:0007135!2.96e-10!57;UBERON:0003075!2.13e-09!86;UBERON:0007284!2.13e-09!86;UBERON:0002346!3.67e-09!90;UBERON:0000062!1.07e-08!511;UBERON:0002616!1.27e-08!59;UBERON:0000955!1.77e-08!69;UBERON:0006238!1.77e-08!69;UBERON:0000481!3.75e-08!347;UBERON:0004921!6.77e-08!129;UBERON:0004185!6.77e-08!129;UBERON:0000073!1.38e-07!94;UBERON:0001016!1.38e-07!94;UBERON:0004111!2.26e-07!241;UBERON:0005743!2.82e-07!86;UBERON:0000025!4.69e-07!194;UBERON:0003080!7.58e-07!42;UBERON:0001017!9.20e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;2.04e-09;114!UBERON:0000073;2.46e-07;53!UBERON:0002616;2.46e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.50e-33,114;UBERON:0011216,1.14e-12,223;UBERON:0001049,2.17e-12,56;UBERON:0005068,2.17e-12,56;UBERON:0006241,2.17e-12,56;UBERON:0007135,2.17e-12,56;UBERON:0000073,2.91e-12,53;UBERON:0002616,2.91e-12,53;UBERON:0003075,2.68e-10,82;UBERON:0007284,2.68e-10,82;UBERON:0002346,1.44e-09,86;UBERON:0000955,5.54e-09,68;UBERON:0006238,5.54e-09,68;UBERON:0010371,7.17e-09,104;UBERON:0002780,1.43e-08,41;UBERON:0001890,1.43e-08,41;UBERON:0003080,1.43e-08,41;UBERON:0006240,1.43e-08,41;UBERON:0000025,1.09e-07,192;UBERON:0004111,1.36e-07,240;UBERON:0001017,1.41e-07,81;UBERON:0001016,2.35e-07,89;UBERON:0004921,4.07e-07,118;UBERON:0010314,9.62e-07,132 | |||
|phase1_expression=0.726713517082227,0.214100523890983,0.986680828671798,0,0,0,0,0,0.261185628199839,4.17747692052565,4.18680700783456,0.873765488520689,0.791300934685361,0,0,0,0,0,0,0.123121058076788,0.204000691244253,1.25381888591235,0,0.136874425072884,0,0.152826811495903,0.0821005894499457,0,0.393364276848904,0,0,0,0.6024118375565,4.80680213216824,0,0.142169232487422,0.293600439334847,0,0.601633342410425,0.651032612147555,0.671746422719773,2.26725566213286,0.77272670290256,0.581592955118259,1.51150377475524,1.4555043671269,0.232429036905685,0.822335776043652,0.309706370895104,0.28769239232215,0.256160706529101,0.236482229888585,0,0.645484683583826,1.35426486594342,0,0.272906150057846,0,0.306083892370903,0.641858054152187,0,0,0.398927315243264,0,0.290209238628584,1.13477044938228,0.622822248995575,0,0,0.65156653411535,1.21079900526674,1.84138817993782,0.632924774881769,2.32380814943136,2.55125159958052,3.77385561915077,0.673971786878971,0.901061357049038,0.48217676009124,2.28010194992999,0.59675003159727,0.730656615058536,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,1.02290049474824,1.0843174571537,3.50936537445123,2.89693037921647,3.1811437882044,0.973269740605272,0,0.443458794925128,0.351339142772504,4.1913304159268,0,0.741568885568859,0,0,0,0,0,0,0.39752481473341,0,0,0,0.419499436209906,0.550236083880135,0,0.258416759169329,0.35576626268671,0.33472061276467,1.20848795132744,1.52054421143703,0.24406205754817,0.367663080345869,0,0,0,0.225222960966644,0,0,0.183201743930407,2.63560834872127,3.87780264148325,0.436094052142534,0.496971951695318,0.759783069987479,0.264818361626438,1.43418310374407,0.709336764396714,1.12135520028461,4.2699598291882,3.7000132262574,0,1.34710672069688,0.163461903113459,0.454072282934794,0.576175924479999,4.92075006850973,0,0,0,0.117434498643765,0,0,0,0.122834317311768,0.103325781175765,0,0.494533858557114,0,0,0,0,0,2.19488810440419,0,0,0.794025282120147,0,0,0,0.300091096084402,0.412210116953756,0.257640540045629,0.18611685633159,0.675105328965065,1.16924406193438,0,0.0920498986422993,0,0,0.10075209822764,0,0,0,0,0,0,0.232387885739037,0.10366105501537,0,0,0,0,1.38134921352481,0,0,0.354920400119532,0.674338760312407,0,0.55146986366197,1.30727666455444,0.474541238222193,0,0,0,0,0,2.4694440679884,0,8.87285243752816,36.3646070170722,8.86184860022106,0,2.21379189377604,0.171567810298526,0.658501712451753,0,0.402115889646523,1.01847289674383,0.977424915930974,0,0,0.231860809950154,2.23076519048061,0.577465791044295,0.462985512576611,0.190254152234598,0,0,0,1.63802985597466,0.297262324577456,0.93733833986777,0,0.567100388969546,13.7024539735358,4.94077695473735,1.53353071666084,0,1.49682337822484,0.207328115540772,2.16179930125442,1.8936365013957,0,2.67391897890794,0,0,0,0,0,0.336393253036082,0.43596006883328,0.07333828582095,0.904902010304444,0,0,0.797814349754612,3.12022310734098,0,0,0,0.428933980974443,0.542621605391443,0.823240336780769,0,0.355391948742546,0,4.82303003295338,8.71533458600294,7.99783929456456,0,0.502257091432126,0,1.91699884393266,1.14861935834114,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,1.49801404789436,2.99161459204025,1.24324654030811,0,0,1.08506009479894,0.623912584592421,0.356857977594324,0.473107245101804,0,0.601892199455438,0,2.0694614258501,0.664225598535437,0.184369168541703,0,0,0,0.620304078368662,0.647142602455851,0.213455115606889,0.909382714338778,1.66435439510497,1.5119514666484,0.496215615637554,1.99500565274481,0.561320188866147,0.640695746278505,0,1.76939313257968,0,0,0.355123450626254,0.246381468041427,0,0,0.362578348774867,0.601519410909855,6.07734526976916,2.41110341145674,2.00300284807389,1.70461739447251,0.451199612907412,1.07821471946181,0.784349769176855,1.46139224653261,1.37217117560738,0,0.170093705276516,0.863663664408557,1.54227252690289,1.35473218771926,0.501689773854853,1.78413391131527,3.3243040357149,1.34324852833307,24.3378463076987,25.6206742004403,0,2.62411716559765,5.20605431462885,7.93415789687461,0,0,1.14853107599234,1.30012049207304,0,1.93341436584244,0.308097234229289,0.767518373630648,0,1.39646318328756,0.145016693914229,0.170453254832202,2.93805717634233,11.2393742445465,5.38132188622297,0.765676274967505,12.6447226069437,0.464845549297286,0.94443704049192,0,0.616067160352178,1.06461206063404,0,0.18532421910392,3.00562262158182,0.372158369359667,0,0.190630193923825,0,0,0,0,0.359744915166629,0.54907405947211,0.353437207037059,0.606547444719948,0,0,0,0.243713489631284,0,2.18399858252777,1.41405431953713,0,0,0.66343897524122,0.438450885253763,0.578775534266688,0,0.405820753925408,0.30982349809975,0.281695602532241,0.143411352204052,0.392996164052485,0.35667105148125,0.709522128141196,1.47775344708365,1.31717957183961,0.379473173765715,3.84928192269481,3.75266239629497,0,1.08890984861323,6.02520324971387,0.43050537267123,0,0.443430153536676,0.459446800413919,1.52234282769651,1.52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| |||
|short_description=p3@PACSIN2 | |||
}} |
Revision as of 16:24, 21 January 2014
Short description: | p3@PACSIN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PACSIN2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000402229, ENST00000407585, ENST00000453079, NM_001184971, uc003bde.3, uc003bdf.3_5end |
EntrezGene: | PACSIN2 |
HGNC: | 8571 |
UniProt: | Q9UNF0B0QYG9Q6FIA3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 3.50e-33 | 114 |
organ system subdivision | 1.14e-12 | 223 |
neural tube | 2.17e-12 | 56 |
neural rod | 2.17e-12 | 56 |
future spinal cord | 2.17e-12 | 56 |
neural keel | 2.17e-12 | 56 |
regional part of nervous system | 2.91e-12 | 53 |
regional part of brain | 2.91e-12 | 53 |
neural plate | 2.68e-10 | 82 |
presumptive neural plate | 2.68e-10 | 82 |
neurectoderm | 1.44e-09 | 86 |
brain | 5.54e-09 | 68 |
future brain | 5.54e-09 | 68 |
ecto-epithelium | 7.17e-09 | 104 |
regional part of forebrain | 1.43e-08 | 41 |
forebrain | 1.43e-08 | 41 |
anterior neural tube | 1.43e-08 | 41 |
future forebrain | 1.43e-08 | 41 |
tube | 1.09e-07 | 192 |
anatomical conduit | 1.36e-07 | 240 |
central nervous system | 1.41e-07 | 81 |
nervous system | 2.35e-07 | 89 |
subdivision of digestive tract | 4.07e-07 | 118 |
structure with developmental contribution from neural crest | 9.62e-07 | 132 |