FFCP PHASE1:Hg19::chr22:37415744..37415767,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4357 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7223 | |||
|TSSclassifier=strong | |||
|UniProt=P25325 | |||
|association_with_transcript=7bp_to_ENST00000404802_5end | |||
|description=CAGE_peak_4_at_MPST_5end | |||
|id=chr22:37415744..37415767,+ | |||
|ontology_enrichment_celltype=CL:0002321!5.44e-09!248;CL:0000220!9.94e-09!246;CL:0000055!1.20e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:1000449;5.43e-08;15!CL:1000497;1.88e-07;17!CL:0002518;1.88e-07;17!CL:0002681;8.04e-07;12!CL:0002584;8.04e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:1000449,6.65e-08,15;CL:1000497,1.62e-07,17;CL:0002518,1.62e-07,17;CL:0002321,4.02e-07,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000483!1.00e-07!309;UBERON:0000119!2.49e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;5.43e-08;15!UBERON:0004819;5.43e-08;15!UBERON:0001285;5.43e-08;15!UBERON:0007684;5.43e-08;15!UBERON:0001225;8.04e-07;12!UBERON:0008987;8.04e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,1.85e-08,117;UBERON:0004211,6.65e-08,15;UBERON:0009773,6.65e-08,15;UBERON:0001231,6.65e-08,15;UBERON:0001285,6.65e-08,15;UBERON:0007684,6.65e-08,15;UBERON:0004208,6.65e-08,15;UBERON:0001637,2.17e-07,42;UBERON:0003509,2.17e-07,42;UBERON:0004572,2.17e-07,42;UBERON:0006555,4.17e-07,16;UBERON:0004819,4.17e-07,16;UBERON:0007500,4.44e-07,59;UBERON:0001981,4.44e-07,59;UBERON:0004537,4.44e-07,59;UBERON:0006965,4.44e-07,59;UBERON:0000483,8.58e-07,306 | |||
|phase1_expression=0.363356758541113,0.856402095563933,0.845726424575827,0,0,0,2.53299878168311,1.26343974685366,2.08948502559871,0.982935746006035,8.37361401566913,0.873765488520689,1.58260186937072,0.37129905888014,0.331397375727916,1.34465029290355,0.602694528023977,0,1.46379839637152,1.10808952269109,2.24400760368678,2.82109249330279,0.85870796139317,1.23186982565596,1.00434111675842,0.382067028739756,0.821005894499457,0.944529375764151,0,0,0.309632246632152,2.75826367343678,3.614471025339,2.9580320813343,0.154934401160603,0.568676929949686,0.880801318004542,0,0.200544447470142,0.217010870715852,0.895661896959697,0.971680998056939,0.257575567634187,0,0.377875943688809,0,0,0,0,0.575384784644301,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0.329851300186716,0,0.426224750532694,0,0,0,0,0,0,0,0,0.316462387440884,0.422510572623884,0.212604299965044,0.419317291016752,0.561643155732475,0.450530678524519,0.16072558669708,1.99508920618874,0.99458338599545,1.27864907635244,0,0,0.889509253863555,0.426730222566507,0,1.14950487990897,0,0,1.1384259382189,0.587237189370939,0,0,0,0.790152254325231,0,0,0.205601498999509,2.50779743086017,0,0,0,1.22551502573691,0.589211814949674,0.664601683750863,1.08321545506006,1.5370958367081,2.21100890851793,2.13769275984779,2.21080014228679,0.289803085735052,0,0,0,1.47302145506836,0,1.03088233644789,0.253019692019503,0,0.651083453856419,0.950452044448374,0.301150238155546,0.127986611154418,1.24930726552346,0.236777252044017,0.821127996921047,0.201606743224732,0.267440195783507,0.144824403882799,0,0.670700859703636,1.15076305659177,1.44575660953827,1.50401373190767,1.15877215168659,0,0.973269740605272,0.567208902984407,0.665188192387692,0.614843499851882,1.0478326039817,3.27865759463288,2.59549109949101,0.649094787309367,0.348259474598534,0.531831842075461,0.238490624305342,0.571994910780128,0,0.79504962946682,0,1.04142150482278,2.26123176769604,2.51699661725944,1.92582629358047,1.8809546988313,1.03366703667732,0.71153252537342,0.33472061276467,0.402829317109147,0.760272105718513,1.22031028774085,1.10298924103761,3.24056779152704,0.892997282840798,0.898117490504679,1.35133776579987,4.5994991239765,3.79706263827252,1.64881569537367,0,0,5.66922267785295,0.496971951695318,1.13967460498122,1.19168262731897,0,3.54668382198357,1.12135520028461,2.1349799145941,1.48000529050296,1.55605517699883,0.942974704487816,0.326923806226917,0.756787138224657,0,1.87457145467037,0.312160076830321,1.71141546463335,0.597794722207204,0.939475989150119,1.45685649931318,0.98315564691574,1.42907919878425,1.35117749042945,1.03325781175765,2.37600571456411,0.989067717114227,2.73048408581408,0.718618141816238,0.673344455816265,2.00189631795143,0.831192346452549,0.438977620880838,0.919463387397059,1.50238058906597,1.02088964844019,0.717558542755448,0.640672166455702,1.27159140695737,0.600182192168805,0.412210116953756,0.772921620136887,0.37223371266318,0.506328996723799,0.487185025805993,1.26216887122057,0.736399189138395,0.646584227275248,0.355009592516614,0.201504196455281,1.52604533079439,1.54608682530637,1.63647672354501,1.14721838155602,1.21973706129595,1.19276791489337,1.16193942869518,1.34759371519982,1.7662459561294,0.72995471815166,0,0,2.76269842704961,0.464367928031979,0,0.946454400318751,0.674338760312407,0.723033089650446,1.10293972732394,0.653638332277218,0.71181185733329,0,1.37355025587742,1.15424147083917,1.4763109092493,0,2.057870056657,0,1.26755034821831,0,0,0,0.368965315629341,1.02940686179115,2.30475599358114,3.37205259772859,1.80952150340936,1.01847289674383,1.3032332212413,3.11980435583874,0,1.27523445472584,1.05667824812239,1.01056513432752,0.925971025153221,0.761016608938393,0.790204397959275,0,0.984868024349589,0.468008530278475,0.891786973732369,4.68669169933885,1.00789276919316,1.27597587518148,1.07470227243418,0.871901815541886,0.766765358330422,0,0.176096868026452,0.207328115540772,0.288239906833923,0.88369703398466,1.33345578013555,1.14596527667483,4.68869788840188,3.4214489204541,1.33675740514321,2.40274446275134,0.571652865261156,0.560655421726804,0,0.51336800074665,1.42198887333556,10.7296933755565,0.845302752556,1.06375246633948,1.04007436911366,2.57207374262142,2.83698264046557,0.799266537048298,0.428933980974443,2.71310802695722,2.46972101034231,2.28015329005615,0,0,0.904318131178758,0,1.09970290300263,1.2162378064119,1.00451418286425,0,0.479249710983165,0,0,0.579125226670317,1.2328579353023,0.537182889719687,1.68127715990291,0.197030760201927,0,0.385029108839245,0.508189248444927,1.30139853857622,0,2.34522771468088,1.91381625495949,0,0,0.414415513436035,0.736148950314839,0,1.35632511849868,0.831883446123229,0.713715955188647,0.630809660135739,0.702848489956279,1.80567659836631,2.27407504055985,5.17365356462525,0.664225598535437,1.47495334833363,0.781952530212746,1.37060810223918,1.37257369524342,0.82707210449155,0.647142602455851,0,0.909382714338778,0,2.11673205330776,1.48864684691266,0.153461973288062,1.68396056659844,0.768834895534206,0,0.804269605718038,1.48418066444991,0.61683877521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|short_description=p4@MPST | |||
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Revision as of 15:45, 21 January 2014
Short description: | p4@MPST |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MPST_5end |
Coexpression cluster: | NA |
Association with transcript: | 7bp_to_ENST00000404802_5end |
EntrezGene: | MPST |
HGNC: | 7223 |
UniProt: | P25325 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 6.65e-08 | 15 |
kidney cell | 1.62e-07 | 17 |
kidney epithelial cell | 1.62e-07 | 17 |
embryonic cell | 4.02e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
epithelial tube | 1.85e-08 | 117 |
nephron epithelium | 6.65e-08 | 15 |
renal tubule | 6.65e-08 | 15 |
nephron tubule | 6.65e-08 | 15 |
nephron | 6.65e-08 | 15 |
uriniferous tubule | 6.65e-08 | 15 |
nephrogenic mesenchyme | 6.65e-08 | 15 |
artery | 2.17e-07 | 42 |
arterial blood vessel | 2.17e-07 | 42 |
arterial system | 2.17e-07 | 42 |
excretory tube | 4.17e-07 | 16 |
kidney epithelium | 4.17e-07 | 16 |
epithelial tube open at both ends | 4.44e-07 | 59 |
blood vessel | 4.44e-07 | 59 |
blood vasculature | 4.44e-07 | 59 |
vascular cord | 4.44e-07 | 59 |
epithelium | 8.58e-07 | 306 |