FFCP PHASE1:Hg19::chr22:20008616..20008644,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=128989 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25439 | |||
|TSSclassifier=strong | |||
|UniProt=Q6ICL3,F8WDT9,C9JDT9 | |||
|association_with_transcript=0bp_to_ENST00000327374,ENST00000432883,ENST00000450019,ENST00000450664,ENST00000479679,NM_152906,uc002zrc.1,uc002zrd.1,uc002zre.2,uc002zrf.2,uc002zrg.2,uc010grx.2,uc011ahe.1,uc011ahf.1,uc011ahg.1,uc011ahh.1,uc011ahi.1_5end | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_1_at_C22orf25_5end | |||
|id=chr22:20008616..20008644,+ | |||
|ontology_enrichment_celltype=CL:0000763!1.37e-09!112;CL:0000049!1.37e-09!112;CL:0000766!9.57e-09!76;CL:0000839!5.45e-08!70;CL:0000557!9.27e-07!71 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,4.62e-11,108;CL:0000049,4.62e-11,108;CL:0000766,1.65e-10,72;CL:0000839,9.80e-10,66;CL:0000557,2.69e-08,67;CL:0002194,5.47e-08,59;CL:0000576,5.47e-08,59;CL:0000040,5.47e-08,59;CL:0000559,5.47e-08,59;CL:0002009,2.16e-07,61;CL:0000473,6.94e-07,48;CL:0000234,6.94e-07,48 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.32e-23!115;UBERON:0001049!3.00e-14!57;UBERON:0005068!3.00e-14!57;UBERON:0006241!3.00e-14!57;UBERON:0007135!3.00e-14!57;UBERON:0003080!7.87e-13!42;UBERON:0002780!1.02e-12!41;UBERON:0001890!1.02e-12!41;UBERON:0006240!1.02e-12!41;UBERON:0002616!1.50e-11!59;UBERON:0002020!6.16e-11!34;UBERON:0003528!6.16e-11!34;UBERON:0001893!1.06e-10!34;UBERON:0002791!2.09e-10!33;UBERON:0003081!7.32e-10!216;UBERON:0001869!1.11e-09!32;UBERON:0002619!1.81e-09!22;UBERON:0001950!8.73e-09!20;UBERON:0003075!1.10e-08!86;UBERON:0007284!1.10e-08!86;UBERON:0000955!1.76e-08!69;UBERON:0006238!1.76e-08!69;UBERON:0002193!4.23e-08!112;UBERON:0002390!6.66e-08!102;UBERON:0003061!6.66e-08!102;UBERON:0000956!8.07e-08!25;UBERON:0000203!8.07e-08!25;UBERON:0001017!1.83e-07!82;UBERON:0005743!4.04e-07!86;UBERON:0002346!4.73e-07!90;UBERON:0003056!6.28e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.01e-09;41!UBERON:0001890;1.01e-09;41!UBERON:0002619;2.37e-09;22!UBERON:0003528;3.94e-09;34!UBERON:0002020;3.94e-09;34!UBERON:0001893;5.12e-09;34!UBERON:0002791;7.10e-09;32!UBERON:0001869;8.98e-09;32!UBERON:0001950;1.12e-08;20!UBERON:0000073;6.17e-08;53!UBERON:0002616;6.17e-08;53!UBERON:0000956;8.58e-08;25!UBERON:0000203;8.58e-08;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.54e-22,114;UBERON:0001049,4.03e-14,56;UBERON:0005068,4.03e-14,56;UBERON:0006241,4.03e-14,56;UBERON:0007135,4.03e-14,56;UBERON:0000073,5.79e-13,53;UBERON:0002616,5.79e-13,53;UBERON:0002780,1.02e-12,41;UBERON:0001890,1.02e-12,41;UBERON:0003080,1.02e-12,41;UBERON:0006240,1.02e-12,41;UBERON:0003081,2.89e-12,203;UBERON:0003528,6.16e-11,34;UBERON:0002020,6.16e-11,34;UBERON:0001893,1.06e-10,34;UBERON:0002791,6.16e-10,32;UBERON:0001869,1.11e-09,32;UBERON:0002619,1.81e-09,22;UBERON:0002193,2.04e-09,108;UBERON:0003075,2.15e-09,82;UBERON:0007284,2.15e-09,82;UBERON:0002390,2.85e-09,98;UBERON:0003061,2.85e-09,98;UBERON:0001950,8.73e-09,20;UBERON:0000955,2.40e-08,68;UBERON:0006238,2.40e-08,68;UBERON:0000956,8.07e-08,25;UBERON:0000203,8.07e-08,25;UBERON:0002405,1.15e-07,93;UBERON:0002346,1.26e-07,86;UBERON:0010314,2.04e-07,132;UBERON:0002371,2.38e-07,76;UBERON:0001017,2.46e-07,81;UBERON:0003056,3.43e-07,61;UBERON:0000025,6.58e-07,192 | |||
|phase1_expression=8.17552706717505,12.203729861786,8.88012745804618,13.009528785907,17.8784437770915,6.10636966870258,7.59899634504932,6.31719873426831,6.00726944859629,4.17747692052565,11.8626198555313,3.05817920982241,7.12170841216825,3.21792517696121,5.96515276310248,4.70627602516243,3.61616716814386,8.76372108464848,6.8310591830671,5.54044761345546,11.0160373271897,4.38836610069323,4.29353980696585,4.24310717725941,5.52387614217132,3.82067028739756,3.11982239909794,3.14843125254717,7.47392126012918,1.91914699048606,8.20525453575203,9.19421224478927,11.7470308323518,6.65557218300218,3.25362242437267,3.83856927716038,3.22960483268332,11.0799081706375,9.6261334785668,12.1526087600877,29.1090116511902,28.5026426096702,21.1211965460033,12.7950450126017,6.80176698639857,8.00527401919793,9.29716147622739,8.63452564845834,7.12324653058738,6.32923263108731,4.86705342405291,4.7296445977717,4.82643953031266,6.45484683583826,8.12558919566051,9.22387463758763,8.73299680185107,7.19115150224271,7.34601341690166,3.85114832491312,7.67204550958849,8.2462825046679,6.98122801675712,12.7867425159808,6.96502172708602,7.94339314567596,6.85104473895132,4.52247597462138,10.9511412868242,6.08128765174327,5.44859552370032,4.05105399586321,3.79754864929061,6.76016916198214,12.7562579979026,10.063614984402,11.569849008089,10.6625593917469,7.39337698806569,13.9656244433212,14.3220007583345,13.8824756861122,7.03984977845291,7.09980194640771,10.6741110463627,5.9742231159311,8.80871171479227,4.02326707968138,8.59358334620321,10.494591299889,4.55370375287559,5.28513470433845,7.64546456250458,2.64342657158052,3.92355994087075,7.63813845847723,5.31116379307349,5.89516144123747,6.7848494669838,8.52651126492458,8.47397893247335,5.6813736688168,3.89653456815823,6.23898558556972,9.42738903919479,9.08288967792847,8.39491977671548,9.99112293860266,11.8354006279489,9.53739846701322,9.39590060471884,6.66547097190621,10.0834862950201,6.95606153033254,10.4535523804977,7.0251792472491,11.1133943144557,6.52892146416997,5.31341353240956,7.00843911513013,5.20866763085135,5.70271226669025,7.67933107296641,8.19114311388278,7.49584359314075,7.34009481336452,3.28451198768419,4.43534835094411,6.41856469880418,5.35850294366356,7.31420598941885,3.35350429851818,5.24236503558474,8.67453965722959,7.01873074890245,8.69079113764942,2.3858578411533,7.29952305453954,2.55244006342983,3.76939975686359,3.68906099911129,5.37014209540622,3.64295288292542,8.15725774125745,9.7364218096405,9.40300581416043,12.2321323677356,3.81584998888547,1.71598473234038,6.3147775226026,7.35420907256809,6.881876760849,6.2485290289367,8.47961912886015,7.55098985177831,9.07889538402223,4.80688423034664,7.23566925674121,5.33649394030065,6.6944122552934,11.6820501961653,4.56163263431108,12.4471649349566,5.51494620518803,12.1521292182264,5.17938424047663,5.61323431565425,7.31974623141594,7.66583187329416,8.54339093611316,6.59526278149466,15.8136500923276,19.3890132074163,5.66922267785295,9.44246708221105,6.96467814155189,13.1085089005087,6.59724227722272,5.32002573297536,4.48542080113846,3.20246987189115,10.853372130355,4.66816553099649,7.13966561969347,6.37501422142489,5.60022482286246,5.18558332031999,3.28050004567315,1.87296046098192,7.98660550162229,4.18456305545043,5.04968344168189,4.37056949793955,5.33713065468544,5.10385428137233,7.00155608677077,5.9928953081944,7.12801714369232,7.17074094907815,3.64064544775211,17.2468354035897,3.53505839303539,4.12891115577482,7.48073111807294,7.02364193409341,7.66219489497549,8.26309323986282,5.10444824220095,9.32826105582082,3.20336083227851,4.66250182551036,9.00273288253207,3.91599611106068,11.5938243020533,5.02515512095292,6.91982962189192,7.3077753870899,10.3497847440087,3.40584624976508,5.81925804547723,7.4552014428489,7.2541510723901,5.59549954624609,4.44499962275583,4.90943017063502,4.58887352622406,2.31750041646231,4.37348235460901,2.67246068599892,3.52447587052259,2.52320850875628,1.82488679537915,7.8224766164908,9.64861407289328,11.0507937081984,3.25057549622385,2.88751792667834,4.96888560167344,5.56329477257736,3.13314338848527,3.52940712743661,6.53638332277218,4.27087114399974,4.71909578560575,4.70931516300831,3.8474715694639,14.0249536378683,8.41450642820675,8.6430542379594,10.2906097969879,0,9.82827216677626,5.31710916013264,10.153651286537,2.95172252503473,4.97546649865724,1.86575485194663,5.62008766288098,4.62433273093502,1.94435734832912,4.88712457965487,7.27954349695705,1.44331342025273,5.68058984377876,2.7003999674239,5.05282567163758,6.94478268864916,8.75169100279152,11.0628615714299,10.3018339451385,26.3452196513515,11.2322047266834,16.3494278517601,6.56136837907439,3.02367830757947,4.39502801451398,2.68675568108545,1.45316969256981,3.83382679165211,3.4486426652716,12.5909260638913,12.6470150479871,8.79131715843465,15.275334444592,21.5257861650453,27.8851550657543,53.9200257166216,17.1072446022705,17.172191281455,9.31063479316144,33.1558661851471,4.48524337381443,2.61576041299968,2.6401782895542,4.39523833576444,21.459386751112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| |||
|short_description=p1@C22orf25 | |||
}} |
Revision as of 14:39, 21 January 2014
Short description: | p1@C22orf25 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C22orf25_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 0bp_to_ENST00000327374, ENST00000432883, ENST00000450019, ENST00000450664, ENST00000479679, NM_152906, uc002zrc.1, uc002zrd.1, uc002zre.2, uc002zrf.2, uc002zrg.2, uc010grx.2, uc011ahe.1, uc011ahf.1, uc011ahg.1, uc011ahh.1, uc011ahi.1_5end |
EntrezGene: | C22orf25 |
HGNC: | 25439 |
UniProt: | Q6ICL3F8WDT9C9JDT9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 4.62e-11 | 108 |
common myeloid progenitor | 4.62e-11 | 108 |
myeloid leukocyte | 1.65e-10 | 72 |
myeloid lineage restricted progenitor cell | 9.80e-10 | 66 |
granulocyte monocyte progenitor cell | 2.69e-08 | 67 |
monopoietic cell | 5.47e-08 | 59 |
monocyte | 5.47e-08 | 59 |
monoblast | 5.47e-08 | 59 |
promonocyte | 5.47e-08 | 59 |
macrophage dendritic cell progenitor | 2.16e-07 | 61 |
defensive cell | 6.94e-07 | 48 |
phagocyte | 6.94e-07 | 48 |