FFCP PHASE1:Hg19::chr21:45509627..45509663,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=7109 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11868 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000469521_5end | |||
|description=CAGE_peak_3_at_TRAPPC10_5end | |||
|id=chr21:45509627..45509663,+ | |||
|ontology_enrichment_celltype=CL:0000542!1.18e-35!53;CL:0000051!1.18e-35!53;CL:0000838!1.95e-34!52;CL:0000738!1.41e-28!140;CL:0000791!3.68e-26!18;CL:0000789!3.68e-26!18;CL:0002420!3.68e-26!18;CL:0002419!3.68e-26!18;CL:0000790!3.68e-26!18;CL:0002087!9.23e-25!119;CL:0000037!2.92e-21!172;CL:0000566!2.92e-21!172;CL:0000988!3.15e-19!182;CL:0000236!4.71e-19!14;CL:0002031!2.65e-18!124;CL:0000084!1.78e-17!25;CL:0000827!1.78e-17!25;CL:0002032!1.92e-17!165;CL:0000837!1.92e-17!165;CL:0000625!3.71e-17!11;CL:0000945!2.29e-13!24;CL:0000826!2.29e-13!24;CL:0000624!1.48e-12!6;CL:0000094!4.45e-08!8;CL:0000898!1.59e-07!3;CL:0000623!2.30e-07!3;CL:0000825!2.30e-07!3;CL:0000842!2.94e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000791;3.68e-43;18!CL:0000789;3.68e-43;18!CL:0002419;3.68e-43;18!CL:0000542;2.20e-31;53!CL:0000084;6.31e-30;25!CL:0000236;1.25e-28;13!CL:0000625;1.01e-27;11!CL:0000624;5.92e-20;6!CL:0000945;2.68e-17;24!CL:0000898;1.55e-11;3!CL:0000623;3.20e-11;3!CL:0000226;4.26e-11;3!CL:0000842;4.26e-11;3!CL:0002087;1.47e-09;104!CL:0000815;2.60e-08;2!CL:0000792;2.60e-08;2!CL:0002677;2.60e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,8.64e-54,52;CL:0000542,1.28e-52,53;CL:0000051,1.28e-52,53;CL:0000791,3.76e-43,18;CL:0000789,3.76e-43,18;CL:0002420,3.76e-43,18;CL:0002419,3.76e-43,18;CL:0000790,3.76e-43,18;CL:0000738,1.80e-30,136;CL:0000084,6.41e-30,25;CL:0000827,6.41e-30,25;CL:0002087,7.09e-30,115;CL:0000625,8.18e-28,11;CL:0000236,1.01e-26,14;CL:0002031,6.55e-23,120;CL:0000037,8.86e-23,168;CL:0000988,4.06e-21,177;CL:0000624,7.75e-20,6;CL:0002032,1.41e-18,161;CL:0000837,1.41e-18,161;CL:0000945,1.79e-17,24;CL:0000826,1.79e-17,24;CL:0000898,1.76e-11,3;CL:0000623,3.26e-11,3;CL:0000825,3.26e-11,3;CL:0000226,4.89e-11,3;CL:0000842,4.89e-11,3;CL:0000815,2.84e-08,2;CL:0000792,2.84e-08,2;CL:0002677,2.84e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000790;3.68e-43;18!CL:0000051;2.20e-31;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!4.63e-09!15;UBERON:0000179!4.63e-09!15;UBERON:0000463!4.63e-09!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.60e-07;15!UBERON:0000179;2.60e-07;15!UBERON:0000463;2.60e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.37e-07,15;UBERON:0000179,3.37e-07,15;UBERON:0000463,3.37e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,2.68680578668049,0.619264493264304,0,0,0,0.0774672005803016,0,0,1.66198622559563,0.601633342410425,1.30206522429511,0,0.32389366601898,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0.641858054152187,0,0,0,0,0.290209238628584,0,0,0.251248665256743,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,3.27683166757279,1.77901850772711,2.56038133539904,4.40435585739614,1.72425731986345,1.32208974556972,3.81621501814146,5.69212969109448,6.45960908308033,3.44045905312706,0,2.80254281490768,0,2.16380747125216,1.57204305099666,2.2616164889946,1.67186495390678,14.0146574652444,14.6768819777767,0,0.891283655081389,4.12448270464772,3.54454231333794,3.79125409271022,0.128091319725675,0.130059347559878,0.493313713811028,0.829050053357545,0.579606171470105,6.67289534229272,9.36392898313996,5.22677619024884,2.15287751125376,4.21542542962113,2.74901956386104,5.06039384039006,2.22995790026868,3.25541726928209,2.85135613334512,1.6563263098555,2.04778577847069,0,1.4206635122641,2.46338399076314,4.23374160771938,2.94184215361858,2.75166367377318,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,1.19245312152671,1.14398982156026,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.92576900504818,3.01878604803324,4.2353201972317,0,0,0,0,0,0.749007023947182,2.99161459204025,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72182447021197,4.09856981555372,3.09509917629989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02979043692868,0.764637207142375,1.13929437434833,0.952927101831156,0,1.29694662238543,0.540031437238115,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,1.38141957765574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.95735737970654,2.56526937059684,7.94339188413713,0,0,0,0,0,0,0.364909578431332,0,0,0,0,0,0,0,0,0,0,0,0,1.13843818411917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320362237703084,0.157204305099666,0,0,0,3.16660755790329,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0.301925687133347,1.15761237161917,0.437119121007915,22.5752302253531,0,0,0,0,0,0,0,0.322289439867886,0,0,0,0,0.730336388246517,0.458729283404541,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129177819672012,0.186224142887574,0,0,0,0,0,0.336760265072938,0,0,0,0,0,0,0,0,0,0,0.805095174364105,0 | |||
|short_description=p3@TRAPPC10 | |||
}} |
Revision as of 14:07, 21 January 2014
Short description: | p3@TRAPPC10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_TRAPPC10_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000469521_5end |
EntrezGene: | TRAPPC10 |
HGNC: | 11868 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 8.64e-54 | 52 |
lymphocyte | 1.28e-52 | 53 |
common lymphoid progenitor | 1.28e-52 | 53 |
mature alpha-beta T cell | 3.76e-43 | 18 |
alpha-beta T cell | 3.76e-43 | 18 |
immature T cell | 3.76e-43 | 18 |
mature T cell | 3.76e-43 | 18 |
immature alpha-beta T cell | 3.76e-43 | 18 |
leukocyte | 1.80e-30 | 136 |
T cell | 6.41e-30 | 25 |
pro-T cell | 6.41e-30 | 25 |
nongranular leukocyte | 7.09e-30 | 115 |
CD8-positive, alpha-beta T cell | 8.18e-28 | 11 |
B cell | 1.01e-26 | 14 |
hematopoietic lineage restricted progenitor cell | 6.55e-23 | 120 |
hematopoietic stem cell | 8.86e-23 | 168 |
hematopoietic cell | 4.06e-21 | 177 |
CD4-positive, alpha-beta T cell | 7.75e-20 | 6 |
hematopoietic oligopotent progenitor cell | 1.41e-18 | 161 |
hematopoietic multipotent progenitor cell | 1.41e-18 | 161 |
lymphocyte of B lineage | 1.79e-17 | 24 |
pro-B cell | 1.79e-17 | 24 |
naive T cell | 1.76e-11 | 3 |
natural killer cell | 3.26e-11 | 3 |
pro-NK cell | 3.26e-11 | 3 |
single nucleate cell | 4.89e-11 | 3 |
mononuclear cell | 4.89e-11 | 3 |
regulatory T cell | 2.84e-08 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.84e-08 | 2 |
naive regulatory T cell | 2.84e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 3.37e-07 | 15 |
haemolymphatic fluid | 3.37e-07 | 15 |
organism substance | 3.37e-07 | 15 |