FFCP PHASE1:Hg19::chr21:15918672..15918683,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64092 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10528 | |||
|TSSclassifier=weak | |||
|UniProt=Q9NSI8 | |||
|association_with_transcript=-8bp_to_ENST00000400566,NM_022136,uc002yju.1,uc010gky.1_5end | |||
|coexpression_cluster_id=C1875 | |||
|description=CAGE_peak_2_at_SAMSN1_5end | |||
|id=chr21:15918672..15918683,- | |||
|ontology_enrichment_celltype=CL:0000037!2.64e-84!172;CL:0000566!2.64e-84!172;CL:0002032!8.86e-82!165;CL:0000837!8.86e-82!165;CL:0000988!3.70e-79!182;CL:0000738!8.70e-73!140;CL:0002031!7.71e-60!124;CL:0002087!1.64e-58!119;CL:0000763!1.38e-55!112;CL:0000049!1.38e-55!112;CL:0000766!2.30e-43!76;CL:0000557!2.59e-38!71;CL:0000839!6.06e-36!70;CL:0002009!1.40e-34!65;CL:0002194!1.16e-33!63;CL:0000576!1.16e-33!63;CL:0000040!1.16e-33!63;CL:0000559!1.16e-33!63;CL:0002057!1.09e-32!42;CL:0000860!8.29e-31!45;CL:0000542!2.00e-21!53;CL:0000051!2.00e-21!53;CL:0000838!5.46e-21!52;CL:0000134!9.33e-14!358;CL:0002320!1.63e-12!365;CL:0000084!1.13e-10!25;CL:0000827!1.13e-10!25;CL:0000945!1.95e-10!24;CL:0000826!1.95e-10!24;CL:0000791!3.90e-10!18;CL:0000789!3.90e-10!18;CL:0002420!3.90e-10!18;CL:0002419!3.90e-10!18;CL:0000790!3.90e-10!18;CL:0000219!4.10e-09!390;CL:0000094!1.59e-07!8;CL:0000451!4.45e-07!10;CL:0002393!4.56e-07!9;CL:0002397!4.56e-07!9;CL:0000236!4.86e-07!14;CL:0000625!8.45e-07!11;CL:0000990!9.17e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.01e-32;33!CL:0002057;9.01e-32;33!CL:0000473;9.60e-31;39!CL:0000234;9.60e-31;39!CL:0000576;1.40e-26;48!CL:0000766;8.14e-25;69!CL:0000763;1.82e-20;100!CL:0002087;4.46e-20;104!CL:0000738;1.19e-18;136!CL:0000988;1.16e-16;177!CL:0000542;1.22e-13;53!CL:0000791;9.33e-13;18!CL:0000789;9.33e-13;18!CL:0002419;9.33e-13;18!CL:0000084;6.88e-12;25!CL:0000945;1.78e-11;24!CL:0000094;2.42e-09;8!CL:0000625;2.00e-08;11!CL:0000219;2.73e-08;193!CL:0000081;2.13e-07;11!CL:0000236;6.33e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,9.57e-104,168;CL:0002032,3.18e-100,161;CL:0000837,3.18e-100,161;CL:0000988,2.83e-97,177;CL:0000738,2.44e-91,136;CL:0002087,9.34e-74,115;CL:0002031,1.36e-73,120;CL:0000763,2.65e-70,108;CL:0000049,2.65e-70,108;CL:0000766,2.01e-58,72;CL:0000557,2.15e-50,67;CL:0000839,9.50e-48,66;CL:0000473,1.56e-47,48;CL:0000234,1.56e-47,48;CL:0002194,1.44e-45,59;CL:0000576,1.44e-45,59;CL:0000040,1.44e-45,59;CL:0000559,1.44e-45,59;CL:0002009,1.72e-45,61;CL:0000860,2.31e-42,42;CL:0002057,2.31e-42,42;CL:0000542,2.92e-24,53;CL:0000051,2.92e-24,53;CL:0000134,5.80e-24,354;CL:0000838,1.07e-23,52;CL:0002320,1.27e-22,361;CL:0000219,5.55e-18,386;CL:0000791,8.79e-13,18;CL:0000789,8.79e-13,18;CL:0002420,8.79e-13,18;CL:0002419,8.79e-13,18;CL:0000790,8.79e-13,18;CL:0000048,1.50e-12,427;CL:0000034,4.59e-12,441;CL:0000084,6.68e-12,25;CL:0000827,6.68e-12,25;CL:0000723,7.88e-12,433;CL:0000945,1.56e-11,24;CL:0000826,1.56e-11,24;CL:0000094,2.27e-09,8;CL:0002393,8.95e-09,9;CL:0002397,8.95e-09,9;CL:0000625,2.00e-08,11;CL:0000236,7.16e-08,14;CL:0000081,2.14e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;2.16e-30;42!CL:0000049;1.10e-18;108!CL:0000051;1.22e-13;53!CL:0000790;9.33e-13;18 | |||
|ontology_enrichment_disease=DOID:2531!2.08e-10!51;DOID:0060083!2.08e-10!51;DOID:1240!5.57e-09!39;DOID:8692!2.75e-08!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.46e-08;31!DOID:1240;1.98e-07;39!DOID:2531;8.02e-07;51!DOID:0060083;8.02e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,3.60e-10,51;DOID:0060083,3.60e-10,51;DOID:1240,1.02e-09,39;DOID:8692,5.17e-09,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!7.66e-44!102;UBERON:0003061!7.66e-44!102;UBERON:0002193!2.01e-39!112;UBERON:0002371!4.28e-33!80;UBERON:0001474!1.44e-28!86;UBERON:0002405!7.63e-24!115;UBERON:0004765!1.62e-20!101;UBERON:0001434!1.62e-20!101;UBERON:0007023!1.28e-13!115;UBERON:0003081!1.18e-12!216;UBERON:0002384!2.88e-11!375;UBERON:0000178!8.11e-08!15;UBERON:0000179!8.11e-08!15;UBERON:0000463!8.11e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.13e-07;15!UBERON:0000179;1.13e-07;15!UBERON:0000463;1.13e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.64e-55,98;UBERON:0003061,2.64e-55,98;UBERON:0002193,7.07e-50,108;UBERON:0002371,1.07e-44,76;UBERON:0002405,1.69e-42,93;UBERON:0001474,1.44e-39,82;UBERON:0004765,7.76e-34,90;UBERON:0001434,5.00e-28,100;UBERON:0002384,2.25e-21,371;UBERON:0003081,9.20e-16,203;UBERON:0002204,3.15e-09,167;UBERON:0000178,1.02e-07,15;UBERON:0000179,1.02e-07,15;UBERON:0000463,1.02e-07,15 | |||
|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.82067028739756,2.21671591514854,2.67616656466509,10.6208354749204,13.8178583314997,7.89562228911988,0,0,0,1.78174561334694,2.41687695228617,4.9912074686924,8.86392653651004,9.82667792603694,4.77423915574874,28.8850961769502,26.8831742795753,30.1363414131998,11.6318591023652,12.8477820854195,7.03493777444667,37.6535039787209,20.9695622891131,36.2356453947271,35.9615490402688,23.5667850006773,49.8977505064915,40.679990326921,30.3377801284398,35.2108865145289,33.8836211176688,25.1073658053218,60.2258938312827,45.9125838556354,51.6695733592511,42.8355874285358,21.4403345121365,17.353338213082,22.1636870277001,80.0977498614892,49.9298997728203,79.098425622438,25.3761151909311,21.3807996552283,33.6642709292931,55.6967542422699,97.5935735367046,133.863589887494,15.4216359007718,12.5436536979376,12.3698600849942,15.0520365736303,15.4682199626751,18.9656192302555,10.2604587746849,13.327417372339,11.6905058409366,7.03984977845291,6.00752472388345,9.7846017924991,8.53460445133014,8.40831572775626,7.47178171940828,5.94940385506376,12.4026988089597,2.84606484554724,2.93618594685469,5.73409842187843,2.64342657158052,3.92355994087075,1.58030450865046,3.73748563216283,5.10913991573914,4.93443597598822,10.1983762188314,5.86660079940463,4.73447805734733,0,13.7034861968763,12.3734481139432,9.74749136167933,12.9985854607207,8.58211842162024,9.23421367675135,11.675091226861,12.9884508359349,32.4579456023259,6.52460877913066,8.82884732696053,5.22677619024884,15.5233799495666,8.81407135284419,7.55980380061786,18.2174178254042,8.28270077242652,7.1619179924206,5.70271226669025,5.57127940587759,8.06315650272836,7.49584359314075,5.6826540490564,6.56902397536837,5.04016858061831,2.94184215361858,3.33096128930438,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,14.2800853208061,14.8010276704377,5.7171923023112,0.953962497221368,1.14398982156026,1.11437250398869,0.39752481473341,0,0.347140501607594,0,0,1.37559020970034,0,0,0.71153252537342,0,0,0,0,0.367663080345869,0.81014194788176,1.16089646769304,0.898117490504679,0.112611480483322,0,0,0.366403487860815,57.9833836718678,100.822868678565,0,0,0.25326102332916,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680593098960126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.7922577365751,7.02012795417713,7.58018927672514,0,0,0,0.358234090811393,0,0,24.6331618947972,15.6726212543542,8.50045273717165,9.65603687893642,7.32206113873004,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.51366464488333,17.5789982001244,12.6500363689819,0,0,0,0,0,0,3.25046917581229,4.53170748464433,2.80315847317372,2.43851768931522,0,0,0,0.670065061337395,0,33.7053160776232,41.8826042885635,49.7298616123242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.2707210449155,9.92285323765637,4.69601254335155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,2.36994326789761,0,0,0,0,0,0,0,0,0,0,0,0.340906509664404,0,0,0,0.255225424989168,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,3.20088922641049,0,0,0,0,6.5968189200182,7.64637207142375,3.98753031021914,4.2881719582402,6.58179636937911,3.8908398671563,5.40031437238115,6.34500141035416,0,0,0,4.27347302789153,0,0.284567373393656,3.82623054549174,6.38653988585013,27.9597840393255,1.90506224451495,4.54470716384378,11.5126843026518,0.912938716132769,1.56679895773023,0,3.55512733383367,11.0805771821553,5.44859209415828,4.25846237690326,2.74804275804612,0,0,0.166849141711909,2.9308214310306,3.34087408674291,8.61611792633986,11.3591384959913,3.66379164797602,0,0,3.07667176470977,0,0,0,0.23874448473769,0.593929361665277,0,0,1.26602474769461,1.00177834520615,0.824019371133798,0,1.19548792950642,3.86797481743607,0,0,6.15424027305347,0,0.0898683511473268,0,0,3.05794557474494,4.7896618469388,0,0.969332746095218,0.74214478529481,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.723578631752448,0,0.221158519862449,0,0.219385397153973,0,0,0.384751292518985,0.113942055847001,0,0,0,0,0.0915975934018623,2.66517388009317,1.02193298195737,5.80826948661592,1.99454018280188,2.25595660617181,2.15668787749514,1.84603745673427,0.75901493089674,5.08597052737212,0,0.163232808159148,0,0,0,0.884575645033392,0.611030144933625,2.37216902944498,0.741383633679017,0.835375596043643,1.88723172345896,1.60515529459758,0.937057782901357,0.91227394607833,0,0,0,2.41981432097328,0,1.83241080922615,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.873633341210151,0,0.0967563312890851,0.0730893170861856,0,0.581934098930517,0,0.451961481561065,0.274083849293502,0,0.886351143382302,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,2.40168115483916,2.0535806833799,2.55493176133945,0,3.15464825135177,2.23425921017803,0,0,0.199679000498991,0,0.669514372325618,0.806201669840715,0,0,0,0,0,0,0.338693328263138,0,0.817220436669454,0,0,0,30.3714753594526,0.77380195455795,0.303747783290123,0,1.49730843868477,0.104909176269996,0.211200673038813,0,0,1.42939065274673,1.32418394073086,0,0,0,0,0,15.3513013801264,0,0,0.58620893471233,1.32506888912221,0.517131825446202,1.3223260174269,0,0,5.01900839068165,2.67247318669432,2.48543433208317,4.46549419630756,0,5.9678373206639,1.91502377331055,0,0,0.612691153526923,0,0,0.886068179966986,0.488105059607853,1.001527445652,1.14681839138014,1.10929051536852,0.869349641179368,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0.680117776536817,0.231522474323834,0,0,0,0,0,0,0,0,0,0,1.24432592536558,83.0104915655795,41.4538301777693,98.3028019477624,0,1.47463745252232,0,2.99981093782395,3.20075189082423,8.26631902371915,0,0,0,0,0,0.646948868380091,0,0.218419276384028,0,0,0,0,0,0,0,0,0,0.321146125482298,1.41696576325585,1.11743701340006,0,0,0.0691572524642179,0.484426936895553,0,0.0981477185010256,0,0,0,0,0,0,0.601682626794058,0,0,0,0.327543835020193,0,0.472763092328763,0.781078098613847,0.413373593002368,0.253663240775627,0,0,0.496211178389294,0,0,1.07140367175657,0,0.606965604236632,0.227662191351298,1.1531308121143,23.9686694116021,0,0.951576261675644,0.131545547125698,0,0,0.470958557103084,0.785577949580009,0,0,0.647782773655864,0,0.428859265059938,0,0,0,0,0.828864656652147,0,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0,0,0,0.205325613712494,1.1598144313382,0.971421986118279,0,0,0,0,0,0,0.617393264863557,0.437119121007915,0,0.245148321753905,0,2.35570160537934,5.04978880556046,0,0,6.29692250465019,0.966868319603658,42.8747558917945,0,0.352894871715692,0,0,0,2.43677291357467,0,0.0679914901909147,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.454672189309436,0.267964130156178,1.65833887891756,1.86179392551411,1.70587185520785,0,2.77732312294826,2.73128742901775,0.448527450322454,0.700118741059814,0,0.435433495793923,0.342233301085281,2.49202596153974,2.29511057256564,0.665320713092027,0,0.106727345877715,0,0.0898252021065869,0,0.611207220914332,0.406896178315738,0,2.41528552309231,2.24397944612263 | |||
|short_description=p2@SAMSN1 | |||
}} |
Revision as of 12:58, 21 January 2014
Short description: | p2@SAMSN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SAMSN1_5end |
Coexpression cluster: | C1875_migratory_CD14_CD14CD16_CD4_Basophils_NK_acute |
Association with transcript: | -8bp_to_ENST00000400566, NM_022136, uc002yju.1, uc010gky.1_5end |
EntrezGene: | SAMSN1 |
HGNC: | 10528 |
UniProt: | Q9NSI8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.64e-55 | 98 |
blood island | 2.64e-55 | 98 |
hemolymphoid system | 7.07e-50 | 108 |
bone marrow | 1.07e-44 | 76 |
immune system | 1.69e-42 | 93 |
bone element | 1.44e-39 | 82 |
skeletal element | 7.76e-34 | 90 |
skeletal system | 5.00e-28 | 100 |
connective tissue | 2.25e-21 | 371 |
lateral plate mesoderm | 9.20e-16 | 203 |
musculoskeletal system | 3.15e-09 | 167 |
blood | 1.02e-07 | 15 |
haemolymphatic fluid | 1.02e-07 | 15 |
organism substance | 1.02e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 3.60e-10 | 51 |
immune system cancer | 3.60e-10 | 51 |
leukemia | 1.02e-09 | 39 |
myeloid leukemia | 5.17e-09 | 31 |