FFCP PHASE1:Hg19::chr21:15918618..15918671,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64092 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10528 | |||
|TSSclassifier=weak | |||
|UniProt=Q9NSI8 | |||
|association_with_transcript=0bp_to_ENST00000400564,ENST00000400566,ENST00000493640,NM_022136,uc002yju.1,uc010gky.1_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_1_at_SAMSN1_5end | |||
|id=chr21:15918618..15918671,- | |||
|ontology_enrichment_celltype=CL:0000037!2.22e-79!172;CL:0000566!2.22e-79!172;CL:0002032!3.18e-77!165;CL:0000837!3.18e-77!165;CL:0000988!2.07e-74!182;CL:0000738!4.11e-63!140;CL:0000763!2.01e-55!112;CL:0000049!2.01e-55!112;CL:0002031!9.99e-53!124;CL:0002087!4.33e-50!119;CL:0000766!1.02e-38!76;CL:0000557!8.34e-34!71;CL:0000839!4.39e-33!70;CL:0002009!3.68e-30!65;CL:0002194!1.99e-29!63;CL:0000576!1.99e-29!63;CL:0000040!1.99e-29!63;CL:0000559!1.99e-29!63;CL:0002057!2.92e-29!42;CL:0000860!6.55e-27!45;CL:0000542!6.02e-18!53;CL:0000051!6.02e-18!53;CL:0000838!1.41e-17!52;CL:0000134!1.05e-10!358;CL:0000084!5.97e-10!25;CL:0000827!5.97e-10!25;CL:0000791!1.61e-09!18;CL:0000789!1.61e-09!18;CL:0002420!1.61e-09!18;CL:0002419!1.61e-09!18;CL:0000790!1.61e-09!18;CL:0002320!1.95e-09!365;CL:0000945!8.79e-08!24;CL:0000826!8.79e-08!24;CL:0000094!3.34e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.18e-23;33!CL:0002057;2.18e-23;33!CL:0000473;5.74e-22;39!CL:0000234;5.74e-22;39!CL:0000576;1.84e-20;48!CL:0000766;1.09e-18;69!CL:0000763;1.77e-17;100!CL:0002087;1.59e-15;104!CL:0000738;3.29e-14;136!CL:0000988;1.64e-13;177!CL:0000084;1.17e-10;25!CL:0000542;1.48e-10;53!CL:0000791;4.10e-10;18!CL:0000789;4.10e-10;18!CL:0002419;4.10e-10;18!CL:0000094;1.26e-07;8!CL:0000945;2.55e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.41e-85,168;CL:0002032,3.36e-83,161;CL:0000837,3.36e-83,161;CL:0000988,1.12e-81,177;CL:0000738,6.98e-69,136;CL:0000763,2.57e-61,108;CL:0000049,2.57e-61,108;CL:0002031,1.38e-57,120;CL:0002087,9.42e-55,115;CL:0000766,3.02e-44,72;CL:0000557,8.23e-39,67;CL:0000839,5.08e-38,66;CL:0002009,7.60e-35,61;CL:0000473,3.33e-34,48;CL:0000234,3.33e-34,48;CL:0002194,4.45e-34,59;CL:0000576,4.45e-34,59;CL:0000040,4.45e-34,59;CL:0000559,4.45e-34,59;CL:0000860,2.53e-31,42;CL:0002057,2.53e-31,42;CL:0000542,3.38e-18,53;CL:0000051,3.38e-18,53;CL:0000838,8.41e-18,52;CL:0000134,3.96e-12,354;CL:0002320,6.71e-11,361;CL:0000084,1.19e-10,25;CL:0000827,1.19e-10,25;CL:0000791,4.15e-10,18;CL:0000789,4.15e-10,18;CL:0002420,4.15e-10,18;CL:0002419,4.15e-10,18;CL:0000790,4.15e-10,18;CL:0000094,1.27e-07,8;CL:0000219,2.38e-07,386;CL:0000945,2.57e-07,24;CL:0000826,2.57e-07,24;CL:0002393,5.03e-07,9;CL:0002397,5.03e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.27e-22;42!CL:0000049;1.43e-16;108!CL:0000051;1.48e-10;53!CL:0000790;4.10e-10;18 | |||
|ontology_enrichment_disease=DOID:2531!5.24e-13!51;DOID:0060083!5.24e-13!51;DOID:1240!1.67e-12!39;DOID:8692!6.58e-12!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;4.07e-11;31!DOID:1240;1.54e-09;39!DOID:2531;1.43e-08;51!DOID:0060083;1.43e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.65e-12,51;DOID:0060083,2.65e-12,51;DOID:1240,6.70e-12,39;DOID:8692,1.54e-11,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.02e-38!102;UBERON:0003061!2.02e-38!102;UBERON:0002193!1.09e-34!112;UBERON:0002371!2.34e-28!80;UBERON:0001474!7.38e-24!86;UBERON:0002405!3.81e-23!115;UBERON:0007023!8.46e-20!115;UBERON:0004765!2.08e-16!101;UBERON:0001434!2.08e-16!101;UBERON:0003081!6.27e-13!216;UBERON:0002384!3.95e-08!375;UBERON:0000178!1.25e-07!15;UBERON:0000179!1.25e-07!15;UBERON:0000463!1.25e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.47e-08;15!UBERON:0000179;4.47e-08;15!UBERON:0000463;4.47e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.35e-44,98;UBERON:0003061,7.35e-44,98;UBERON:0002193,9.51e-39,108;UBERON:0002371,6.07e-33,76;UBERON:0002405,2.33e-31,93;UBERON:0001474,4.19e-28,82;UBERON:0004765,8.70e-23,90;UBERON:0007023,1.27e-20,114;UBERON:0001434,4.11e-18,100;UBERON:0003081,1.40e-14,203;UBERON:0002384,1.21e-09,371;UBERON:0000178,4.43e-08,15;UBERON:0000179,4.43e-08,15;UBERON:0000463,4.43e-08,15 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0.631719873426831,0,1.22866968250754,0,0,0,0,0,8.0679017574213,0,0,0,0,0,0,0,0,0,29.5719880244571,25.2048809611333,31.0120478375896,806.003403263404,411.848944158309,226.186356164787,0,0,0,28.507929813551,13.6482463187925,51.6736773229331,339.599185430041,286.176926539892,146.699348603916,401.032614363705,308.02287638405,407.999699132551,269.859131174872,198.762746380314,165.684913791278,921.813560367945,488.467450969929,878.636974229409,963.19412949456,596.085964093217,1290.7200107319,1345.19764623429,806.855854479783,868.083779069731,697.814352684436,453.842927546198,1355.53205817275,1539.90806251801,1337.63218485316,1419.32841927387,463.770928062523,403.514979368561,350.782969688407,2446.75409087759,1488.81882958955,2334.96061148441,766.81092636358,598.140907427971,1097.02085460554,1637.00025512063,2414.05990389849,3647.22901525619,300.405017135581,321.882910147076,203.368886143125,248.358603464901,253.498595116463,281.26977671989,282.732641791319,263.564597288794,233.810116818731,42.2390986707174,51.3370294586404,34.6908609006786,44.8066733694833,35.6352428462051,44.2559378764952,38.340602621522,45.7945802176975,18.2148150115023,73.4046486713674,67.6623613781655,47.5816782884493,254.470887593617,29.4990174948086,132.975804596951,116.724196536502,138.36980882667,198.283183533344,157.746377050658,112.680577764867,79.8789586472436,367.765918177958,390.352827404159,250.111766984908,320.360970834013,162.29170209243,197.690208291015,296.152666191221,323.329520809443,483.101743920333,70.4361175019787,48.4248898842381,53.3131171405382,293.697816272092,205.40618457063,163.910291495214,307.671945495715,94.2953626399326,85.2919324551908,87.4415880892504,90.0439212085081,85.7510294734603,137.42379920758,111.285308460688,95.2508476428414,118.343158272918,91.731987153743,52.8609074172216,0,1.34140171940727,0.255725123687061,0,0,0,0,0,0,0,0.87834785693126,5.10818394441079,0,0,162.922791614651,168.209326231092,78.9770285482059,37.9200092645494,17.731842234184,17.08704506116,2.38514888840046,1.72046919021225,3.12426451446835,0.56530794192401,1.67799774483962,12.380311887303,3.9709043641994,0,0,2.00832367658802,1.61131726843659,3.04108842287405,0,1.47065232138347,7.29127753093584,5.17938424047663,2.91888184414021,3.15312145353302,3.06633274931766,0,5.1296488300514,2219.18222962331,4781.33065694885,0,0,1.39293562831038,0,0.573673241497627,1.41867352879343,0,0,0,0.933633106199299,3.23305612967251,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.65071950956086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,1.2781333715647,0.207322110030741,0.756962552626885,0,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,1.61797569792197,0,0,0.738155454624648,0,0,0,2.53510069643662,10.8110993834539,10.0434284135839,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0.577465791044295,0,0.190254152234598,0,0,313.188031743169,46.5668487627083,78.0313602015823,0,0,0,0.985143749731331,0,0,927.192213720166,1029.72643578468,286.112799446265,377.882517859273,322.044447670695,0,0,0,0,0,0,0,0,0,0,0.646358578788889,0,0,0,0,0,0,0,0.285955987316295,0.542621605391443,0,0,0,0,0,0,0,72.9742683847143,157.206469618256,149.692097032952,0,0,0,0,0,0,88.9956043308607,101.864903024396,95.5230156627662,55.3158486365716,0.254094624222463,0,0.773288812777695,9.71594338939223,0,1485.28092848726,1301.35234753751,2973.84572441699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,203.873273757167,186.592783708104,136.291091314998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.3481913652154,12.2874661981703,0,0,0.325378394664303,69.1405188156216,0,0,0,0,0,0,0,0.15350367472613,0,0,0,1.44885266607372,0,0.165284915360978,0,1.53135254993501,0.30347334256665,0,0,0,0.616067160352178,0,0,0.18532421910392,0.286249773483982,0,0,0,0,0,0.95460974377781,0,0,0,0,0,0,0.842516912477962,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,5.26699946769575,0,0,0,0.35667105148125,0,0.844430541190656,0,0,0,0,1.34060455107157,0,60.534463899469,0,0,0,0,95.4001505356478,94.8150136856545,56.9647187174163,84.8105120629729,89.6769755327903,86.8954236998241,100.985878763527,45.2081350487734,0,0,0,62.2440636671158,0.144269212976445,5.26449640778264,31.0881231821204,149.884107946045,422.652351882133,42.9697372929482,56.1595956674981,220.706581997179,18.7152436807218,17.7048282223516,12.5317238545034,65.5159180092205,145.492796043952,83.7468784842847,40.455392580581,30.9154810280188,0.921722292925374,1.78940886313933,1.33479313369527,18.3664809677918,141.430336338783,141.550508789869,401.626682536835,97.5900866233613,235.448298496709,0,38.67815932778,0,0,0,9.07229042003222,5.64232893582013,0.307160702099232,12.9239194209619,18.1463547169561,6.23328748128273,18.4580339133971,0,13.1503672245706,50.5599565422,0,0,68.1889822254325,0,0.988551862620595,0,0.511572370226872,32.4536804545512,50.2914493928574,0,1.93866549219044,10.0189546014799,1.99613798001194,0,0,8.69999490521752,0,0,0,0,0,0,26.5722415744152,10.7330830376613,4.5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| |||
|short_description=p1@SAMSN1 | |||
}} |
Revision as of 12:58, 21 January 2014
Short description: | p1@SAMSN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SAMSN1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000400564, ENST00000400566, ENST00000493640, NM_022136, uc002yju.1, uc010gky.1_5end |
EntrezGene: | SAMSN1 |
HGNC: | 10528 |
UniProt: | Q9NSI8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.35e-44 | 98 |
blood island | 7.35e-44 | 98 |
hemolymphoid system | 9.51e-39 | 108 |
bone marrow | 6.07e-33 | 76 |
immune system | 2.33e-31 | 93 |
bone element | 4.19e-28 | 82 |
skeletal element | 8.70e-23 | 90 |
adult organism | 1.27e-20 | 114 |
skeletal system | 4.11e-18 | 100 |
lateral plate mesoderm | 1.40e-14 | 203 |
connective tissue | 1.21e-09 | 371 |
blood | 4.43e-08 | 15 |
haemolymphatic fluid | 4.43e-08 | 15 |
organism substance | 4.43e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.65e-12 | 51 |
immune system cancer | 2.65e-12 | 51 |
leukemia | 6.70e-12 | 39 |
myeloid leukemia | 1.54e-11 | 31 |