FFCP PHASE1:Hg19::chr20:61077113..61077116,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C866 | |||
|description=CAGE_peak_at_chr20:61077113..61077116,+ | |||
|id=chr20:61077113..61077116,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.72e-34!42;CL:0002031!1.77e-34!124;CL:0000738!2.25e-34!140;CL:0000766!3.59e-34!76;CL:0000839!6.67e-33!70;CL:0000557!3.12e-32!71;CL:0000860!2.03e-31!45;CL:0000988!2.97e-31!182;CL:0002032!1.42e-30!165;CL:0000837!1.42e-30!165;CL:0002009!1.72e-30!65;CL:0002087!2.18e-30!119;CL:0002194!5.24e-30!63;CL:0000576!5.24e-30!63;CL:0000040!5.24e-30!63;CL:0000559!5.24e-30!63;CL:0000037!2.06e-29!172;CL:0000566!2.06e-29!172;CL:0000763!1.90e-26!112;CL:0000049!1.90e-26!112;CL:0000134!1.43e-10!358;CL:0000219!1.76e-10!390;CL:0002320!5.96e-10!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.98e-61;33!CL:0002057;1.98e-61;33!CL:0000473;3.03e-47;39!CL:0000234;3.03e-47;39!CL:0000576;2.69e-35;48!CL:0000766;1.66e-30;69!CL:0000763;3.11e-13;100!CL:0002087;1.55e-10;104!CL:0000097;2.30e-09;5!CL:0000738;3.48e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.36e-64,42;CL:0002057,9.36e-64,42;CL:0000473,5.61e-60,48;CL:0000234,5.61e-60,48;CL:0000839,1.44e-56,66;CL:0000557,1.21e-55,67;CL:0000766,3.82e-55,72;CL:0002194,8.65e-51,59;CL:0000576,8.65e-51,59;CL:0000040,8.65e-51,59;CL:0000559,8.65e-51,59;CL:0002009,5.82e-49,61;CL:0000763,2.44e-37,108;CL:0000049,2.44e-37,108;CL:0002031,3.63e-33,120;CL:0000738,1.31e-30,136;CL:0000988,3.59e-29,177;CL:0002087,9.42e-28,115;CL:0002032,1.19e-26,161;CL:0000837,1.19e-26,161;CL:0000037,2.93e-25,168;CL:0000134,6.64e-11,354;CL:0002320,1.50e-10,361;CL:0000097,2.37e-09,5;CL:0002028,2.37e-09,5;CL:0000219,2.66e-09,386;CL:0000048,8.93e-08,427;CL:0000723,1.45e-07,433;CL:0000034,2.71e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;2.55e-47;42!CL:0000049;4.52e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.14e-28!80;UBERON:0002390!7.49e-28!102;UBERON:0003061!7.49e-28!102;UBERON:0001474!2.07e-25!86;UBERON:0002193!5.19e-25!112;UBERON:0004765!1.35e-20!101;UBERON:0001434!1.35e-20!101;UBERON:0002405!2.46e-20!115;UBERON:0002384!5.12e-10!375;UBERON:0002204!1.59e-08!167;UBERON:0003081!2.58e-08!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.14e-48,76;UBERON:0002390,4.57e-45,98;UBERON:0003061,4.57e-45,98;UBERON:0001474,1.94e-44,82;UBERON:0002193,2.60e-40,108;UBERON:0004765,5.68e-40,90;UBERON:0002405,1.71e-38,93;UBERON:0001434,2.21e-35,100;UBERON:0002204,1.01e-18,167;UBERON:0003081,2.31e-18,203;UBERON:0000926,2.98e-11,315;UBERON:0004120,2.98e-11,315;UBERON:0006603,2.98e-11,315;UBERON:0002384,4.56e-10,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458480434487708,0.164201178899891,0.314843125254717,0.393364276848904,0.383829398097213,1.54816123316076,0,0,0,0,0.142169232487422,0,1.66198622559563,0.401088894940283,2.17010870715852,0,0,0,0.581592955118259,0.755751887377619,0,4.18372266430232,2.05583944010913,4.33588919253145,3.45230870786581,3.58624989140741,0.47296445977717,2.75796544589295,3.87290810150296,2.70852973188684,1.88242339542605,2.72906150057846,1.57306439111559,3.36692281607993,1.92557416245656,3.19668562899521,0.329851300186716,0.398927315243264,0,2.61188314765726,2.8369261234557,4.35975574296902,4.01997864410789,4.17186334736161,2.82345498116652,0.605399502633369,4.41933163185078,1.89877432464531,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0.560508562981536,0,0,0,0.411202997999018,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.97364218096405,0,0.797747763113191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0.246217006087397,0,0.148631162288728,0,0.16798212819886,0,0,0,0,0,0,2.28060927094849,1.58531948758658,2.65109110195398,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0.502257091432126,2.10833939483032,0,0,0,0,0,0,0.224170287987055,0.197030760201927,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0.784306353074702,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,1.48171507906718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540911356951966,0,0,0,0.146508179271894,0,0.222886768554957,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,1.35393286007176,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0.797594390929008,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0.189753732724185,0,0.421996129056054,0.163232808159148,0,0,0,0,0,3.55825354416746,2.10058696209055,1.98401704060365,0,0,0,0,0,0,0,0,0,0,1.65355761355942,0,0,0,0,0,0,0.138674673013139,0,0.0979923974143777,0.174118413160805,0,0,0,0,0,0,0,0,0,1.58971689362392,0,0,0.0801588202515337,0,0,0,0,0,0.288109595976299,0.124252535565433,0,0.407712618220842,0.627617077873999,0,0,0,0,0,0,8.41239533693806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285465333544967,0,0,0,0,0,0,0.189403005275089,0,0,0.228840068396924,0,0,0,0,1.79921244865442,0,0,0,0,0.300515217994437,0.761610424337591,0,0,0.214821114084977,0,0,0,0,0,0,0.385239660814607,0,0,0,0,0,0,0,0,0,0.578742114812744,0.168942440653073,1.02496607435179,0,0.303859956177382,0,0.194860308839388,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0.123935764259002,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460935950223117,0,0,0,0,0,0.078493092850514,0,0,0,1.07963795609311,0.9555033757741,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0.4582137370881,2.17144469965024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0.299823467774787,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0.23806443146374,0,0,0.112131862580613,0,0,0,0,0,0.143444410785353,0,0.407016343054873,0,0,0,0,0.122241444182866,0,0,0,0.641136984606466 | |||
|short_description=p@chr20:61077113..61077116,+ | |||
}} |
Revision as of 12:39, 21 January 2014
Short description: | p@chr20:61077113..61077116, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr20:61077113..61077116, + |
Coexpression cluster: | C866_hairy_CD14_mycosis_cord_Eosinophils_CD14CD16_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.36e-64 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.36e-64 | 42 |
defensive cell | 5.61e-60 | 48 |
phagocyte | 5.61e-60 | 48 |
myeloid lineage restricted progenitor cell | 1.44e-56 | 66 |
granulocyte monocyte progenitor cell | 1.21e-55 | 67 |
myeloid leukocyte | 3.82e-55 | 72 |
monopoietic cell | 8.65e-51 | 59 |
monocyte | 8.65e-51 | 59 |
monoblast | 8.65e-51 | 59 |
promonocyte | 8.65e-51 | 59 |
macrophage dendritic cell progenitor | 5.82e-49 | 61 |
myeloid cell | 2.44e-37 | 108 |
common myeloid progenitor | 2.44e-37 | 108 |
hematopoietic lineage restricted progenitor cell | 3.63e-33 | 120 |
leukocyte | 1.31e-30 | 136 |
hematopoietic cell | 3.59e-29 | 177 |
nongranular leukocyte | 9.42e-28 | 115 |
hematopoietic oligopotent progenitor cell | 1.19e-26 | 161 |
hematopoietic multipotent progenitor cell | 1.19e-26 | 161 |
hematopoietic stem cell | 2.93e-25 | 168 |
mesenchymal cell | 6.64e-11 | 354 |
connective tissue cell | 1.50e-10 | 361 |
mast cell | 2.37e-09 | 5 |
basophil mast progenitor cell | 2.37e-09 | 5 |
motile cell | 2.66e-09 | 386 |
multi fate stem cell | 8.93e-08 | 427 |
somatic stem cell | 1.45e-07 | 433 |
stem cell | 2.71e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.14e-48 | 76 |
hematopoietic system | 4.57e-45 | 98 |
blood island | 4.57e-45 | 98 |
bone element | 1.94e-44 | 82 |
hemolymphoid system | 2.60e-40 | 108 |
skeletal element | 5.68e-40 | 90 |
immune system | 1.71e-38 | 93 |
skeletal system | 2.21e-35 | 100 |
musculoskeletal system | 1.01e-18 | 167 |
lateral plate mesoderm | 2.31e-18 | 203 |
mesoderm | 2.98e-11 | 315 |
mesoderm-derived structure | 2.98e-11 | 315 |
presumptive mesoderm | 2.98e-11 | 315 |
connective tissue | 4.56e-10 | 371 |