FFCP PHASE1:Hg19::chr20:45523227..45523293,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2139 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3520 | |||
|TSSclassifier=strong | |||
|UniProt=O00167 | |||
|association_with_transcript=0bp_to_ENST00000327619,ENST00000357410,NM_005244,NM_172110,uc002xsm.2,uc010ghp.2_5end | |||
|description=CAGE_peak_2_at_EYA2_5end | |||
|id=chr20:45523227..45523293,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.80e-23!115;UBERON:0000153!3.17e-17!129;UBERON:0007811!3.17e-17!129;UBERON:0003075!5.99e-17!86;UBERON:0007284!5.99e-17!86;UBERON:0000033!1.88e-16!123;UBERON:0002346!5.42e-15!90;UBERON:0000475!3.98e-14!365;UBERON:0003056!1.42e-13!61;UBERON:0005743!2.11e-13!86;UBERON:0001049!3.85e-13!57;UBERON:0005068!3.85e-13!57;UBERON:0006241!3.85e-13!57;UBERON:0007135!3.85e-13!57;UBERON:0001017!9.47e-12!82;UBERON:0000073!3.60e-11!94;UBERON:0001016!3.60e-11!94;UBERON:0004121!3.78e-11!169;UBERON:0002616!5.50e-11!59;UBERON:0000955!7.28e-11!69;UBERON:0006238!7.28e-11!69;UBERON:0000924!3.74e-10!173;UBERON:0006601!3.74e-10!173;UBERON:0003080!5.09e-10!42;UBERON:0002780!1.54e-09!41;UBERON:0001890!1.54e-09!41;UBERON:0006240!1.54e-09!41;UBERON:0002020!4.56e-08!34;UBERON:0003528!4.56e-08!34;UBERON:0001444!4.77e-08!48;UBERON:0001893!6.66e-08!34;UBERON:0002791!1.24e-07!33;UBERON:0000481!2.24e-07!347;UBERON:0001869!2.33e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;6.40e-08;114!UBERON:0002780;3.21e-07;41!UBERON:0001890;3.21e-07;41!UBERON:0003528;6.91e-07;34!UBERON:0002020;6.91e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.31e-25,114;UBERON:0003075,1.50e-14,82;UBERON:0007284,1.50e-14,82;UBERON:0002346,5.19e-13,86;UBERON:0003056,1.00e-12,61;UBERON:0001049,9.99e-12,56;UBERON:0005068,9.99e-12,56;UBERON:0006241,9.99e-12,56;UBERON:0007135,9.99e-12,56;UBERON:0001017,8.26e-11,81;UBERON:0000073,2.64e-10,53;UBERON:0002616,2.64e-10,53;UBERON:0011216,2.86e-10,223;UBERON:0000955,5.62e-10,68;UBERON:0006238,5.62e-10,68;UBERON:0002780,9.09e-10,41;UBERON:0001890,9.09e-10,41;UBERON:0003080,9.09e-10,41;UBERON:0006240,9.09e-10,41;UBERON:0010314,1.34e-09,132;UBERON:0010371,2.96e-09,104;UBERON:0004121,3.52e-09,171;UBERON:0000924,3.52e-09,171;UBERON:0006601,3.52e-09,171;UBERON:0001016,5.45e-09,89;UBERON:0003528,4.85e-08,34;UBERON:0002020,4.85e-08,34;UBERON:0001893,7.34e-08,34;UBERON:0002791,3.06e-07,32;UBERON:0001869,3.09e-07,32 | |||
|phase1_expression=11.9907730318567,9.42042305120326,10.8534891153898,4.00293193412522,4.02264984984559,3.48935409640147,2.53299878168311,1.89515962028049,6.00726944859629,0.245733936501509,1.39560233594486,0.218441372130172,0,3.46545788288131,8.28493439319789,0.672325146451775,0,0,0,0.369363174230364,0.408001382488506,0.313454721478088,0.85870796139317,0.136874425072884,0,9.93374274723366,8.37426012389447,7.39881344348585,0,0.383829398097213,0,15.6301608161418,13.5542663450213,4.43704812200145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853460445133014,2.00197993518006,0,0.661044872784862,0.954053754535364,1.1384259382189,0,0.764546456250458,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,1.15076305659177,2.53007406669196,1.50401373190767,4.77993512570718,0,0.973269740605272,1.89069634328136,1.10864698731282,1.75669571386252,3.40545596294053,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,4.79703457356788,0,0.12663051166458,0,0.286836620748814,0.709336764396714,1.68203280042692,0,0.24666754841716,0,0,0,0.151357427644931,1.15235184896,4.45210720484214,0,0.570471821544449,0.149448680551801,0,0.323745888736263,0,0.204154171254893,0.368502951935304,0.826606249406124,14.2560342873846,12.6106133932064,0,0,0,0.625592599359821,0,12.2913733846635,11.0335606487647,23.1366610716159,0,0,0,0.423863802319124,0.600182192168805,0,1.03056216018252,0.930584281657949,9.78902726999344,5.26159827870473,0.252433774244115,0.368199594569197,6.46584227275248,0,0,1.86516651541536,0,0,0,1.34171076742555,1.06023814657188,1.62671520017326,4.35376431064556,2.01856680700503,1.09493207722749,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,1.20097467208968,0,0,0,0.185176890317059,5.2129328849652,1.03993478527958,0,3.13012093432707,1.99594780200897,0,0,0,3.1608175918371,4.29243081047436,0.984868024349589,0,0.148631162288728,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,1.34557301214433,1.74384027533312,0.80672114403045,0.129271715757778,10.7296933755565,0,0,0,7.45901385360212,4.25547396069835,2.39779961114489,0,0,0,0,0,0,0,0,0,0,0,0,0.718874566474748,2.29723871668228,0,1.30303176000821,1.43833425785268,3.04403637507822,0,0,0,0,4.8277978602268,2.60279707715243,0,0,0,0,0,0,8.71109591205893,15.0051156317903,4.06897535549603,0,0.178428988797162,0,0,7.22270639346525,15.9185252839189,4.1389228517002,9.96338397803155,12.5371034608358,0,1.76221041716467,2.74514739048685,0,0,0,0,0,0,7.93944985020086,9.36118037057181,10.3844234940237,5.38184426873944,4.60536524160033,1.12597744800525,4.45254199334973,0.308419387605311,0.710246901252508,0.492762936082855,0,0.929683027679674,0,5.61418116849198,4.78821142466661,3.4444334449382,9.28664956834257,12.4568194211453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.1806035032589,5.24823433119529,4.88067591996455,2.06082023295445,0.915694648183434,2.47528499761764,0,0,0,1.7400729292582,1.84858340537573,1.22802939780904,0.413509717453592,2.14840489736547,2.17525040871343,0.0852266274161009,1.4245125703478,5.95025695299521,8.07198282933446,16.0792017743176,9.71114696213279,0,0,0,0,0,0,0,0,1.48863347743867,0,0,0,0.42793898803392,0,0,0.359744915166629,0.823611089208164,0,0,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0,0,0.578775534266688,2.62357900818653,0,0,0,0,0,0,1.06428319221179,2.74439925886963,0.658589785919804,0.75894634753143,5.24902080367474,8.17887958166853,5.3624182042863,6.53345909167936,2.07116361708914,0.43050537267123,1.68471475667626,0,0.459446800413919,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,2.4906390476222,0.242721043499027,0,0.284136146806413,0,0,0,3.97659059106519,4.50142132513641,0,0,1.05562704063997,5.37969568277888,4.14425873296722,0,6.23838963263144,7.2620035222031,0,0,0,0,3.45251919729268,0,0,1.93866549219044,2.31920245404628,0,1.30213880542617,0,8.69999490521752,38.2345986239279,0,0.236387681767936,0,0,2.2571249341328,2.65722415744152,4.70326110639091,0,2.43274371848694,0.295547618953547,3.72955175161753,0,2.92789862985067,14.4666485987138,1.13942055847001,0.46112780877612,0,2.39024218228418,0,0.183195186803725,2.13213910407454,0,0,0,0,0,0,0,0,0,0,0,0,7.96209544862804,3.36138745112689,0,18.3843099781986,14.0862890399013,15.5588704763129,2.76344645220776,0,1.87411556580271,0,21.914437320394,0,16.177960516825,1.20990716048664,2.14250933141343,28.3075876735626,3.00646838828985,5.59916233545135,0.664653872707185,0,0.627865836814451,1.19472429772959,0,0,6.07459084172958,0.391969589657511,29.5130710307565,7.68797340264933,0,0,0,0,10.6687918137261,0.441280633457501,8.3612874088797,0,0,1.64608069485285,8.01760669212692,0.0801588202515337,1.70762395791482,0.19980960958213,0,1.4889757501569,0,0,0.124252535565433,2.59263438078475,0,0,2.24396078799908,0,2.40168115483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| |||
|short_description=p2@EYA2 | |||
}} |
Revision as of 11:44, 21 January 2014
Short description: | p2@EYA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_EYA2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000327619, ENST00000357410, NM_005244, NM_172110, uc002xsm.2, uc010ghp.2_5end |
EntrezGene: | EYA2 |
HGNC: | 3520 |
UniProt: | O00167 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 2.31e-25 | 114 |
neural plate | 1.50e-14 | 82 |
presumptive neural plate | 1.50e-14 | 82 |
neurectoderm | 5.19e-13 | 86 |
pre-chordal neural plate | 1.00e-12 | 61 |
neural tube | 9.99e-12 | 56 |
neural rod | 9.99e-12 | 56 |
future spinal cord | 9.99e-12 | 56 |
neural keel | 9.99e-12 | 56 |
central nervous system | 8.26e-11 | 81 |
regional part of nervous system | 2.64e-10 | 53 |
regional part of brain | 2.64e-10 | 53 |
organ system subdivision | 2.86e-10 | 223 |
brain | 5.62e-10 | 68 |
future brain | 5.62e-10 | 68 |
regional part of forebrain | 9.09e-10 | 41 |
forebrain | 9.09e-10 | 41 |
anterior neural tube | 9.09e-10 | 41 |
future forebrain | 9.09e-10 | 41 |
structure with developmental contribution from neural crest | 1.34e-09 | 132 |
ecto-epithelium | 2.96e-09 | 104 |
ectoderm-derived structure | 3.52e-09 | 171 |
ectoderm | 3.52e-09 | 171 |
presumptive ectoderm | 3.52e-09 | 171 |
nervous system | 5.45e-09 | 89 |
brain grey matter | 4.85e-08 | 34 |
gray matter | 4.85e-08 | 34 |
telencephalon | 7.34e-08 | 34 |
regional part of telencephalon | 3.06e-07 | 32 |
cerebral hemisphere | 3.09e-07 | 32 |