FFCP PHASE1:Hg19::chr20:19955765..19955805,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54453 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=18750 | |||
|TSSclassifier=strong | |||
|UniProt=Q8WYP3 | |||
|association_with_transcript=-136bp_to_M37190_5end | |||
|description=CAGE_peak_6_at_RIN2_5end | |||
|id=chr20:19955765..19955805,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.22e-12!180;CL:0000057!2.10e-08!75;CL:0000187!8.96e-08!54;CL:0000680!1.92e-07!57;CL:0000056!1.92e-07!57;CL:0000355!1.92e-07!57 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,9.93e-08,76;CL:0000187,5.28e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!8.88e-26!365;UBERON:0007023!1.32e-23!115;UBERON:0000481!4.83e-22!347;UBERON:0003075!8.25e-22!86;UBERON:0007284!8.25e-22!86;UBERON:0001049!1.31e-20!57;UBERON:0005068!1.31e-20!57;UBERON:0006241!1.31e-20!57;UBERON:0007135!1.31e-20!57;UBERON:0000033!1.99e-20!123;UBERON:0002346!6.54e-20!90;UBERON:0002616!1.98e-19!59;UBERON:0000153!2.82e-19!129;UBERON:0007811!2.82e-19!129;UBERON:0005743!1.74e-18!86;UBERON:0000955!2.68e-18!69;UBERON:0006238!2.68e-18!69;UBERON:0000119!3.19e-17!312;UBERON:0000483!6.05e-17!309;UBERON:0001017!6.84e-17!82;UBERON:0000062!8.92e-17!511;UBERON:0000477!9.90e-17!286;UBERON:0000468!1.17e-16!659;UBERON:0004121!1.34e-16!169;UBERON:0000073!4.07e-16!94;UBERON:0001016!4.07e-16!94;UBERON:0000467!9.96e-16!625;UBERON:0000924!1.33e-15!173;UBERON:0006601!1.33e-15!173;UBERON:0000480!1.85e-15!626;UBERON:0003056!1.78e-14!61;UBERON:0003080!3.72e-14!42;UBERON:0004111!4.12e-14!241;UBERON:0002780!1.05e-13!41;UBERON:0001890!1.05e-13!41;UBERON:0006240!1.05e-13!41;UBERON:0002020!1.94e-13!34;UBERON:0003528!1.94e-13!34;UBERON:0001893!2.22e-13!34;UBERON:0002791!5.21e-13!33;UBERON:0002050!6.38e-13!605;UBERON:0005423!6.38e-13!605;UBERON:0000923!1.26e-12!604;UBERON:0005291!1.26e-12!604;UBERON:0006598!1.26e-12!604;UBERON:0002532!1.26e-12!604;UBERON:0000922!2.50e-12!612;UBERON:0000064!3.55e-12!219;UBERON:0001869!3.68e-12!32;UBERON:0000025!8.30e-12!194;UBERON:0002619!1.00e-09!22;UBERON:0000956!9.59e-09!25;UBERON:0000203!9.59e-09!25;UBERON:0000914!1.15e-08!83;UBERON:0002329!1.15e-08!83;UBERON:0003077!1.15e-08!83;UBERON:0003059!1.15e-08!83;UBERON:0007282!1.15e-08!83;UBERON:0009618!1.15e-08!83;UBERON:0007285!1.15e-08!83;UBERON:0001950!1.68e-08!20;UBERON:0002385!6.61e-08!63;UBERON:0001015!6.61e-08!63;UBERON:0000383!6.61e-08!63;UBERON:0003076!7.86e-08!15;UBERON:0003057!7.86e-08!15;UBERON:0001134!1.17e-07!61;UBERON:0002036!1.17e-07!61;UBERON:0003082!1.17e-07!61;UBERON:0004290!1.94e-07!70;UBERON:0000479!4.51e-07!787;UBERON:0004732!6.30e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.49e-11;34!UBERON:0003528;2.31e-11;34!UBERON:0002020;2.31e-11;34!UBERON:0000073;5.35e-11;53!UBERON:0002616;5.35e-11;53!UBERON:0002791;5.55e-11;32!UBERON:0001869;8.19e-11;32!UBERON:0002780;3.06e-10;41!UBERON:0001890;3.06e-10;41!UBERON:0002619;8.60e-10;22!UBERON:0001950;1.88e-08;20!UBERON:0001017;2.97e-08;75!UBERON:0000956;3.72e-08;25!UBERON:0000203;3.72e-08;25!UBERON:0000955;1.22e-07;68!UBERON:0004732;1.39e-07;13!UBERON:0007023;1.85e-07;114!UBERON:0002420;2.61e-07;9!UBERON:0007245;2.61e-07;9!UBERON:0010009;2.61e-07;9!UBERON:0010011;2.61e-07;9!UBERON:0000454;2.61e-07;9!UBERON:0000125;3.21e-07;9!UBERON:0002308;3.21e-07;9!UBERON:0004733;4.66e-07;12!UBERON:0002028;4.66e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.97e-25,114;UBERON:0010314,2.02e-24,132;UBERON:0003075,7.58e-23,82;UBERON:0007284,7.58e-23,82;UBERON:0001049,6.85e-21,56;UBERON:0005068,6.85e-21,56;UBERON:0006241,6.85e-21,56;UBERON:0007135,6.85e-21,56;UBERON:0002346,2.59e-20,86;UBERON:0000073,2.54e-19,53;UBERON:0002616,2.54e-19,53;UBERON:0000955,3.26e-17,68;UBERON:0006238,3.26e-17,68;UBERON:0010371,9.39e-17,104;UBERON:0001017,1.21e-15,81;UBERON:0003056,1.81e-14,61;UBERON:0002780,8.00e-14,41;UBERON:0001890,8.00e-14,41;UBERON:0003080,8.00e-14,41;UBERON:0006240,8.00e-14,41;UBERON:0000119,1.49e-13,309;UBERON:0000483,2.75e-13,306;UBERON:0003528,3.03e-13,34;UBERON:0002020,3.03e-13,34;UBERON:0001893,3.48e-13,34;UBERON:0001016,3.81e-13,89;UBERON:0004111,9.09e-13,240;UBERON:0004121,1.32e-12,171;UBERON:0000924,1.32e-12,171;UBERON:0006601,1.32e-12,171;UBERON:0002791,4.16e-12,32;UBERON:0001869,7.19e-12,32;UBERON:0000025,1.90e-10,192;UBERON:0002619,8.15e-10,22;UBERON:0011216,1.66e-09,223;UBERON:0003076,1.53e-08,15;UBERON:0003057,1.53e-08,15;UBERON:0001950,1.75e-08,20;UBERON:0000956,3.43e-08,25;UBERON:0000203,3.43e-08,25;UBERON:0000923,5.27e-08,560;UBERON:0010316,5.27e-08,560;UBERON:0005291,5.27e-08,560;UBERON:0006598,5.27e-08,560;UBERON:0010317,5.27e-08,560;UBERON:0002532,5.27e-08,560;UBERON:0000479,6.84e-08,773;UBERON:0002050,8.37e-08,564;UBERON:0004732,1.55e-07,13;UBERON:0002420,3.32e-07,9;UBERON:0007245,3.32e-07,9;UBERON:0010009,3.32e-07,9;UBERON:0010011,3.32e-07,9;UBERON:0000454,3.32e-07,9;UBERON:0005423,4.17e-07,581;UBERON:0000125,4.69e-07,9;UBERON:0002308,4.69e-07,9;UBERON:0004733,5.37e-07,12;UBERON:0002028,5.37e-07,12;UBERON:0007277,5.37e-07,12;UBERON:0002385,6.41e-07,64;UBERON:0001015,6.41e-07,64;UBERON:0000383,6.41e-07,64;UBERON:0007524,7.65e-07,73 | |||
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| |||
|short_description=p6@RIN2 | |||
}} |
Revision as of 10:27, 21 January 2014
Short description: | p6@RIN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_RIN2_5end |
Coexpression cluster: | NA |
Association with transcript: | -136bp_to_M37190_5end |
EntrezGene: | RIN2 |
HGNC: | 18750 |
UniProt: | Q8WYP3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 9.93e-08 | 76 |
muscle cell | 5.28e-07 | 55 |