FFCP PHASE1:Hg19::chr20:5107452..5107476,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8760 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1801 | |||
|TSSclassifier=strong | |||
|UniProt=O95674 | |||
|association_with_transcript=-5bp_to_uc002wlr.1,uc002wls.2,uc002wlu.2,uc010zqt.1,uc010zqu.1_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_CDS2_5end | |||
|id=chr20:5107452..5107476,+ | |||
|ontology_enrichment_celltype=CL:0002319!1.94e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0002319;4.91e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.94e-08,25 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.81e-12;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.25e-35!82;UBERON:0000073!8.76e-35!94;UBERON:0001016!8.76e-35!94;UBERON:0005743!1.96e-34!86;UBERON:0002346!5.91e-31!90;UBERON:0001049!1.42e-30!57;UBERON:0005068!1.42e-30!57;UBERON:0006241!1.42e-30!57;UBERON:0007135!1.42e-30!57;UBERON:0000955!7.38e-30!69;UBERON:0006238!7.38e-30!69;UBERON:0003075!1.12e-28!86;UBERON:0007284!1.12e-28!86;UBERON:0002616!3.17e-26!59;UBERON:0000924!1.77e-24!173;UBERON:0006601!1.77e-24!173;UBERON:0004121!1.36e-22!169;UBERON:0002780!1.54e-22!41;UBERON:0001890!1.54e-22!41;UBERON:0006240!1.54e-22!41;UBERON:0003080!2.12e-22!42;UBERON:0002020!3.66e-21!34;UBERON:0003528!3.66e-21!34;UBERON:0001893!5.01e-21!34;UBERON:0001869!9.90e-21!32;UBERON:0002791!2.31e-20!33;UBERON:0003056!6.01e-20!61;UBERON:0000033!5.19e-17!123;UBERON:0000153!5.54e-17!129;UBERON:0007811!5.54e-17!129;UBERON:0000956!6.09e-17!25;UBERON:0000203!6.09e-17!25;UBERON:0007023!4.93e-16!115;UBERON:0002619!7.22e-16!22;UBERON:0001950!1.24e-14!20;UBERON:0000025!1.24e-12!194;UBERON:0000475!8.25e-11!365;UBERON:0004111!1.09e-09!241;UBERON:0003076!2.90e-09!15;UBERON:0003057!2.90e-09!15;UBERON:0000483!3.36e-09!309;UBERON:0000119!3.57e-09!312;UBERON:0000064!3.14e-08!219;UBERON:0000477!7.97e-08!286;UBERON:0004733!9.34e-08!12;UBERON:0002028!9.34e-08!12;UBERON:0007277!9.34e-08!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.71e-28;32!UBERON:0003528;3.92e-27;34!UBERON:0002020;3.92e-27;34!UBERON:0001893;5.46e-27;34!UBERON:0002791;1.42e-26;32!UBERON:0000956;1.08e-25;25!UBERON:0000203;1.08e-25;25!UBERON:0000073;1.20e-24;53!UBERON:0002616;1.20e-24;53!UBERON:0002780;1.79e-24;41!UBERON:0001890;1.79e-24;41!UBERON:0002619;3.71e-24;22!UBERON:0001950;3.27e-22;20!UBERON:0000955;4.87e-19;68!UBERON:0001017;1.89e-18;75!UBERON:0001016;4.25e-18;83!UBERON:0004733;1.86e-11;12!UBERON:0002028;1.86e-11;12!UBERON:0004732;3.03e-10;13!UBERON:0002680;4.67e-09;9!UBERON:0001895;4.67e-09;9!UBERON:0001871;6.06e-08;6!UBERON:0000200;1.29e-07;6!UBERON:0002420;5.90e-07;9!UBERON:0007245;5.90e-07;9!UBERON:0010009;5.90e-07;9!UBERON:0010011;5.90e-07;9!UBERON:0000454;5.90e-07;9!UBERON:0002021;7.45e-07;5!UBERON:0000125;8.34e-07;9!UBERON:0002308;8.34e-07;9!UBERON:0011216;9.56e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.97e-49,89;UBERON:0001017,9.92e-49,81;UBERON:0001049,5.54e-47,56;UBERON:0005068,5.54e-47,56;UBERON:0006241,5.54e-47,56;UBERON:0007135,5.54e-47,56;UBERON:0000073,2.01e-44,53;UBERON:0002616,2.01e-44,53;UBERON:0002346,3.88e-44,86;UBERON:0000955,6.73e-43,68;UBERON:0006238,6.73e-43,68;UBERON:0003075,1.31e-40,82;UBERON:0007284,1.31e-40,82;UBERON:0002780,4.06e-34,41;UBERON:0001890,4.06e-34,41;UBERON:0003080,4.06e-34,41;UBERON:0006240,4.06e-34,41;UBERON:0004121,1.90e-33,171;UBERON:0000924,1.90e-33,171;UBERON:0006601,1.90e-33,171;UBERON:0001869,1.21e-31,32;UBERON:0003528,4.60e-31,34;UBERON:0002020,4.60e-31,34;UBERON:0001893,7.47e-31,34;UBERON:0003056,1.07e-29,61;UBERON:0002791,3.10e-29,32;UBERON:0010371,6.44e-29,104;UBERON:0000956,1.11e-25,25;UBERON:0000203,1.11e-25,25;UBERON:0010314,6.76e-25,132;UBERON:0002619,5.41e-24,22;UBERON:0001950,4.71e-22,20;UBERON:0007023,5.08e-18,114;UBERON:0011216,4.81e-17,223;UBERON:0003076,1.24e-13,15;UBERON:0003057,1.24e-13,15;UBERON:0000025,5.66e-13,192;UBERON:0004733,2.83e-11,12;UBERON:0002028,2.83e-11,12;UBERON:0007277,2.83e-11,12;UBERON:0004732,4.41e-10,13;UBERON:0004111,1.85e-09,240;UBERON:0002680,6.99e-09,9;UBERON:0001895,6.99e-09,9;UBERON:0010092,6.99e-09,9;UBERON:0000922,6.74e-08,592;UBERON:0001871,7.64e-08,6;UBERON:0000200,1.36e-07,6;UBERON:0002050,1.69e-07,564;UBERON:0000923,1.75e-07,560;UBERON:0010316,1.75e-07,560;UBERON:0005291,1.75e-07,560;UBERON:0006598,1.75e-07,560;UBERON:0010317,1.75e-07,560;UBERON:0002532,1.75e-07,560;UBERON:0005423,2.19e-07,581;UBERON:0002420,3.80e-07,9;UBERON:0007245,3.80e-07,9;UBERON:0010009,3.80e-07,9;UBERON:0010011,3.80e-07,9;UBERON:0000454,3.80e-07,9;UBERON:0000125,5.38e-07,9;UBERON:0002308,5.38e-07,9;UBERON:0000483,7.31e-07,306;UBERON:0002021,8.04e-07,5 | |||
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| |||
|short_description=p3@CDS2 | |||
}} |
Revision as of 10:05, 21 January 2014
Short description: | p3@CDS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CDS2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -5bp_to_uc002wlr.1, uc002wls.2, uc002wlu.2, uc010zqt.1, uc010zqu.1_5end |
EntrezGene: | CDS2 |
HGNC: | 1801 |
UniProt: | O95674 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.94e-08 | 25 |