FFCP PHASE1:Hg19::chr2:242194534..242194576,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3069 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4857 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=238bp_to_ENST00000498595_5end | |||
|description=CAGE_peak_7_at_HDLBP_5end | |||
|id=chr2:242194534..242194576,- | |||
|ontology_enrichment_celltype=CL:0000055!3.20e-17!180;CL:0000057!7.38e-10!75;CL:0000680!1.93e-08!57;CL:0000056!1.93e-08!57;CL:0000355!1.93e-08!57;CL:0000220!3.62e-08!246;CL:0000359!3.63e-08!32;CL:0000187!4.92e-08!54;CL:0002321!7.25e-08!248;CL:0000393!1.11e-07!60;CL:0000211!1.11e-07!60;CL:0000183!3.35e-07!59;CL:0000192!6.63e-07!42;CL:0000514!6.63e-07!42;CL:0002334!8.21e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002334;2.31e-08;12!CL:0000359;2.35e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.78e-10,76;CL:0000680,4.03e-09,58;CL:0000056,4.03e-09,58;CL:0000355,4.03e-09,58;CL:0002334,8.52e-09,12;CL:0000187,1.02e-08,55;CL:0000393,2.30e-08,61;CL:0000211,2.30e-08,61;CL:0000359,1.10e-07,32;CL:0000048,4.72e-07,427;CL:0000723,4.92e-07,433;CL:0000192,6.73e-07,43;CL:0000514,6.73e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.04e-10!83;UBERON:0002329!1.04e-10!83;UBERON:0003077!1.04e-10!83;UBERON:0003059!1.04e-10!83;UBERON:0007282!1.04e-10!83;UBERON:0009618!1.04e-10!83;UBERON:0007285!1.04e-10!83;UBERON:0002100!1.07e-10!216;UBERON:0003102!1.45e-10!95;UBERON:0005256!4.53e-10!143;UBERON:0004290!3.37e-09!70;UBERON:0000486!5.48e-09!82;UBERON:0003104!1.57e-08!238;UBERON:0009142!1.57e-08!238;UBERON:0000475!5.73e-08!365;UBERON:0001134!8.07e-08!61;UBERON:0002036!8.07e-08!61;UBERON:0003082!8.07e-08!61;UBERON:0002385!1.39e-07!63;UBERON:0001015!1.39e-07!63;UBERON:0000383!1.39e-07!63;UBERON:0001637!4.95e-07!42;UBERON:0003509!4.95e-07!42;UBERON:0004572!4.95e-07!42 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,1.56e-10,73;UBERON:0005256,1.69e-10,122;UBERON:0003102,2.28e-10,99;UBERON:0002329,2.89e-10,71;UBERON:0003059,2.89e-10,71;UBERON:0007282,2.89e-10,71;UBERON:0004290,2.89e-10,71;UBERON:0009618,2.89e-10,71;UBERON:0007503,5.90e-10,78;UBERON:0003077,6.01e-10,72;UBERON:0007285,6.01e-10,72;UBERON:0000486,2.06e-09,83;UBERON:0002385,8.44e-09,64;UBERON:0001015,8.44e-09,64;UBERON:0000383,8.44e-09,64;UBERON:0001134,1.00e-08,62;UBERON:0002036,1.00e-08,62;UBERON:0003082,1.00e-08,62;UBERON:0002199,8.77e-08,46;UBERON:0002416,8.77e-08,46;UBERON:0003104,2.49e-07,160;UBERON:0009142,2.49e-07,160 | |||
|phase1_expression=4.90531624030503,2.35510576280081,1.9733616573436,0,2.23480547213644,7.85104671690332,5.06599756336621,3.79031924056099,1.56711376919903,0.245733936501509,0.697801167972428,0,0.791300934685361,2.10402800032079,1.32558950291166,2.6893005858071,2.41077811209591,0.730310090387373,0.975865597581014,0.246242116153576,0.408001382488506,0.626909442956176,0.286235987131057,0.547497700291537,0.87879847716362,0.305653622991805,0.164201178899891,0.708397031823113,0,0,0.154816123316076,0,0.6024118375565,1.10926203050036,0.0774672005803016,0.142169232487422,0,0.553995408531877,0.401088894940283,0,1.11957737119962,0.32389366601898,0.77272670290256,0.726991193897824,0.377875943688809,0.485168122375632,0.464858073811369,0.411167888021826,0,0.28769239232215,0.256160706529101,0,0,0,1.35426486594342,0.564727018627814,0.545812300115692,0.224723484445085,0.306083892370903,0,0,0.329851300186716,0.598390972864896,0,0,0,0,0.251248665256743,0,0,0,0.368277635987565,0.316462387440884,0,0,0,0.112328631146495,0,0.16072558669708,0,0.39783335439818,0,0,0,0.889509253863555,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0.222820913770347,0,0,0,0.25618263945135,0.130059347559878,0.328875809207352,0.552700035571697,0,0.14828656316206,0,0,0.226618685395132,0,0,0.253019692019503,0,0,0,0,0.255973222308837,0,0.473554504088034,0,0.201606743224732,0,0.144824403882799,0,1.34140171940727,0.383587685530591,2.53007406669196,3.00802746381534,1.59331170856906,0.795285947051099,3.40644409211845,0.189069634328136,1.55210578223795,0.351339142772504,0.654895377488563,0,0,0.324547393654683,0,0.132957960518865,0,0,0,0.198762407366705,0,0,0.56530794192401,1.25849830862972,1.6507082516404,0.626984899610432,0.775250277507987,0,0.66944122552934,2.81980521976403,0.760272105718513,1.46437234528902,0.367663080345869,0.81014194788176,0.625098097988558,0.898117490504679,0.112611480483322,0,0,0.916008719652036,0,0,0.436094052142534,0.993943903390637,3.29239330327907,0.529636723252875,2.58152958673932,0.709336764396714,1.68203280042692,2.1349799145941,0.49333509683432,0.933633106199299,1.0776853765575,1.14423332179421,1.21085942115945,1.72852777344,0.468642863667593,3.1216007683032,0.570471821544449,1.19558944441441,1.40921398372518,0.809364721840658,0.140450806702248,0.816616685019573,1.47401180774122,0.826606249406124,5.94001428641027,3.95627086845691,1.82032272387605,0,0.336672227908132,1.87677779807946,0.554128230968366,0.877955241761676,2.45190236639216,2.25357088359895,0.794025282120147,0,1.2813443329114,1.48352330811693,0,2.06105058476878,0.772921620136887,1.8611685633159,0.337552664482532,1.85130309806277,0.757301322732344,1.65689817556139,2.10139873864455,0.710019185033229,1.0075209822764,0.339121184620975,0.386521706326594,0.272746120590835,0.860413786167011,0.487894824518382,0,0.464775771478074,0.621966330092223,0.504641701751257,0.72995471815166,1.56449532329816,5.78916844373597,1.38134921352481,1.39310378409594,1.44375896333917,0.946454400318751,0.674338760312407,0.482022059766964,0.330881918197182,0.653638332277218,0.237270619111097,0.943819157121151,0.784885860501384,1.15424147083917,0,2.80483547606892,1.2347220339942,0,3.80265104465493,2.94848165003288,0.590789906681404,0,0.368965315629341,1.02940686179115,1.42675371031213,1.1240175325762,0.402115889646523,0.370353780634118,0.977424915930974,0,0,0.231860809950154,0.587043471179108,1.01056513432752,2.31492756288305,0.761016608938393,0.790204397959275,0.858486162094873,0,0.468008530278475,0.594524649154913,0,2.01578553838631,0.992425680696705,0.626909658919938,0.290633938513962,1.53353071666084,1.97065295158377,0.528290604079356,1.65862492432618,1.29707958075265,1.2624243342638,0,4.58386110669933,0,0,1.13110241973656,0.901029173531752,1.42913216315289,0.448524337381443,0.87192013766656,0.36669142910475,0.904902010304444,0,2.535908257668,1.06375246633948,1.04007436911366,0.771622122786426,0,1.3321108950805,1.14382394926518,1.08524321078289,0,0.977208552881205,1.42156779497018,0.791951872933429,3.31583314765545,0,1.29964888536674,4.86495122564762,0.502257091432126,0,0.479249710983165,0,2.85273810081437,1.15825045334063,2.05476322550383,0.537182889719687,0.224170287987055,0.394061520403854,0.215627574859517,0,2.54094624222463,0,0,0.167516265334349,0.637938751653163,0,2.99161459204025,0.414415513436035,0.736148950314839,2.00068208423871,0.813795071099207,1.66376689224646,2.85486382075459,1.26161932027148,1.17141414992713,2.70851489754947,15.9185252839189,3.10419213877515,0,0.921845842708516,3.12781012085098,0.391602314925481,1.37257369524342,0.206768026122887,0.215714200818617,0.213455115606889,0.303127571446259,0,0.907170879989041,2.72918588600655,0.767309866440312,3.08726103876381,1.92208723883551,2.04682899626681,2.2519548960105,4.45254199334973,2.7757744884478,3.19611105563629,1.8067974323038,5.71179872101983,1.39452454151951,0.846016147141356,5.21316822788541,1.65745780084613,1.49258782613989,2.73136752010076,6.42509633301178,0.902399225814824,0.231046011313244,0,0,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| |||
|short_description=p7@HDLBP | |||
}} |
Revision as of 09:39, 21 January 2014
Short description: | p7@HDLBP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_HDLBP_5end |
Coexpression cluster: | NA |
Association with transcript: | 238bp_to_ENST00000498595_5end |
EntrezGene: | HDLBP |
HGNC: | 4857 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.78e-10 | 76 |
muscle precursor cell | 4.03e-09 | 58 |
myoblast | 4.03e-09 | 58 |
multi-potent skeletal muscle stem cell | 4.03e-09 | 58 |
preadipocyte | 8.52e-09 | 12 |
muscle cell | 1.02e-08 | 55 |
electrically responsive cell | 2.30e-08 | 61 |
electrically active cell | 2.30e-08 | 61 |
vascular associated smooth muscle cell | 1.10e-07 | 32 |
multi fate stem cell | 4.72e-07 | 427 |
somatic stem cell | 4.92e-07 | 433 |
smooth muscle cell | 6.73e-07 | 43 |
smooth muscle myoblast | 6.73e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 1.56e-10 | 73 |
trunk mesenchyme | 1.69e-10 | 122 |
surface structure | 2.28e-10 | 99 |
somite | 2.89e-10 | 71 |
presomitic mesoderm | 2.89e-10 | 71 |
presumptive segmental plate | 2.89e-10 | 71 |
dermomyotome | 2.89e-10 | 71 |
trunk paraxial mesoderm | 2.89e-10 | 71 |
epithelial vesicle | 5.90e-10 | 78 |
paraxial mesoderm | 6.01e-10 | 72 |
presumptive paraxial mesoderm | 6.01e-10 | 72 |
multilaminar epithelium | 2.06e-09 | 83 |
muscle tissue | 8.44e-09 | 64 |
musculature | 8.44e-09 | 64 |
musculature of body | 8.44e-09 | 64 |
skeletal muscle tissue | 1.00e-08 | 62 |
striated muscle tissue | 1.00e-08 | 62 |
myotome | 1.00e-08 | 62 |
integument | 8.77e-08 | 46 |
integumental system | 8.77e-08 | 46 |
mesenchyme | 2.49e-07 | 160 |
entire embryonic mesenchyme | 2.49e-07 | 160 |