FFCP PHASE1:Hg19::chr2:242173297..242173311,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C4212 | |||
|description=CAGE_peak_at_chr2:242173297..242173311,- | |||
|id=chr2:242173297..242173311,- | |||
|ontology_enrichment_celltype=CL:0000055!2.21e-14!180;CL:0002321!6.20e-09!248;CL:0000220!7.83e-09!246;CL:0000393!8.77e-09!60;CL:0000211!8.77e-09!60;CL:0000548!1.57e-08!679;CL:0000004!1.57e-08!679;CL:0000255!1.57e-08!679;CL:0000680!3.57e-08!57;CL:0000056!3.57e-08!57;CL:0000355!3.57e-08!57;CL:0000012!6.67e-08!682;CL:0000187!8.38e-08!54;CL:0000057!2.65e-07!75;CL:0000192!2.94e-07!42;CL:0000514!2.94e-07!42;CL:0000183!3.88e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000134;1.96e-08;55!CL:0000723;2.01e-08;61!CL:0000048;8.03e-08;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,2.01e-09,61;CL:0000211,2.01e-09,61;CL:0000680,9.43e-09,58;CL:0000056,9.43e-09,58;CL:0000355,9.43e-09,58;CL:0002321,1.28e-08,250;CL:0000057,1.88e-08,76;CL:0000187,2.59e-08,55;CL:0000192,2.15e-07,43;CL:0000514,2.15e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2394,5.51e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!2.49e-09!83;UBERON:0002329!2.49e-09!83;UBERON:0003077!2.49e-09!83;UBERON:0003059!2.49e-09!83;UBERON:0007282!2.49e-09!83;UBERON:0009618!2.49e-09!83;UBERON:0007285!2.49e-09!83;UBERON:0004290!5.23e-09!70;UBERON:0000486!1.14e-08!82;UBERON:0001134!9.19e-08!61;UBERON:0002036!9.19e-08!61;UBERON:0003082!9.19e-08!61;UBERON:0004872!1.98e-07!84;UBERON:0001637!2.15e-07!42;UBERON:0003509!2.15e-07!42;UBERON:0004572!2.15e-07!42;UBERON:0002385!3.35e-07!63;UBERON:0001015!3.35e-07!63;UBERON:0000383!3.35e-07!63;UBERON:0005256!4.27e-07!143;UBERON:0000468!5.52e-07!659;UBERON:0001013!8.60e-07!14;UBERON:0000490!9.98e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;5.42e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,1.96e-09,73;UBERON:0002329,2.28e-09,71;UBERON:0003059,2.28e-09,71;UBERON:0007282,2.28e-09,71;UBERON:0004290,2.28e-09,71;UBERON:0009618,2.28e-09,71;UBERON:0000486,3.60e-09,83;UBERON:0003077,5.55e-09,72;UBERON:0007285,5.55e-09,72;UBERON:0005256,1.73e-08,122;UBERON:0000490,2.80e-08,148;UBERON:0001134,4.51e-08,62;UBERON:0002036,4.51e-08,62;UBERON:0003082,4.51e-08,62;UBERON:0007503,7.01e-08,78;UBERON:0002385,2.45e-07,64;UBERON:0001015,2.45e-07,64;UBERON:0000383,2.45e-07,64;UBERON:0004872,2.46e-07,83;UBERON:0001013,3.54e-07,14;UBERON:0001637,3.73e-07,42;UBERON:0003509,3.73e-07,42;UBERON:0004572,3.73e-07,42;UBERON:0003104,4.20e-07,160;UBERON:0009142,4.20e-07,160;UBERON:0003102,9.79e-07,99 | |||
|phase1_expression=2.90685406832891,7.70761886007539,1.55049844505568,8.00586386825043,4.46961094427288,11.3404008133048,5.06599756336621,1.89515962028049,3.91778442299758,0.737201809504527,0.697801167972428,0.655324116390517,1.58260186937072,4.57935505952172,2.65117900582333,12.101852636132,9.64311244838363,7.30310090387373,9.75865597581014,0.738726348460727,0.612002073732759,0.313454721478088,0.85870796139317,3.28498620174922,1.25542639594803,1.37544130346312,0.903106483949403,0.708397031823113,0,0.383829398097213,0.464448369948228,0,0.90361775633475,1.47901604066715,0.154934401160603,0.426507697462265,0,0,0.601633342410425,0.651032612147555,0.895661896959697,0.647787332037959,0.257575567634187,0.726991193897824,0,0,0.232429036905685,0.411167888021826,0,0.575384784644301,0,0.709446689665756,0.344745680736619,0,0,0.941211697713023,0.818718450173537,0.674170453335254,1.22433556948361,0,0,0.659702600373432,0.199463657621632,0.426224750532694,0.580418477257168,0,0,0.502497330513487,0,0,0,0,0,0.211255286311942,1.06302149982522,0.419317291016752,0.898629049171961,0.150176892841506,0.16072558669708,1.14005097496499,0.39783335439818,0.547992461293902,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0,0,0,0.526768169550154,0,0.393010762749165,0,0.334372990781356,0,0,0,0.222820913770347,0.589211814949674,0,0.270803863765016,0.896639238079726,0.260118695119756,0.657751618414705,0.829050053357545,0,0.14828656316206,0.802622484269139,0,0.453237370790265,0,0.34362744548263,0.506039384039006,0,0,0,0.301150238155546,0,0,0.236777252044017,0,0.403213486449465,0,0,0,8.04841031644363,2.9408389224012,1.80719576192283,3.50936537445123,6.51809335323707,0.795285947051099,4.86634870302636,1.41802225746102,5.32150553910154,1.58102614247627,0.72038491523742,1.45718115317017,1.85392221392215,1.29818957461873,0.870648686496336,1.59549552622638,1.19245312152671,0.571994910780128,0.371457501329565,0.79504962946682,0,1.04142150482278,1.13061588384802,0.419499436209906,6.60283300656162,1.25396979922086,1.55050055501597,0.35576626268671,0,1.20848795132744,1.52054421143703,6.34561349625241,1.10298924103761,8.1014194788176,0.446498641420399,0.898117490504679,1.0135033243499,3.06633274931766,0,2.38162267109529,0,0,0.872188104285069,2.98183171017191,3.41902381494365,0.926864265692532,3.72887606973458,6.73869926176878,6.16745360156538,2.1349799145941,5.92002116201184,0.622422070799533,2.02066008104532,3.26923806226917,1.21085942115945,3.45705554687999,0.234321431833797,3.1216007683032,0.570471821544449,4.33401173600223,2.3486899728753,2.26622122115384,1.40450806702248,1.02077085627447,4.54486974053541,1.85986406116378,0,6.92347401979959,0,2.87447256726495,1.68336113954066,1.87677779807946,0.277064115484183,0.438977620880838,4.90380473278431,2.25357088359895,3.40296549480063,1.97328599257748,4.05759038755278,2.54318281391474,1.50045548042201,1.95799805553034,3.34932702059318,3.7223371266318,0.843881661206331,2.92311015483596,3.28163906517349,1.84099797284599,4.84938170456436,1.77504796258307,3.32481924151213,1.86516651541536,0.57978255948989,0.545492241181669,0.286804595389004,1.21973706129595,1.45782745153634,2.44007280025989,2.38420426535352,1.26160425437814,1.45990943630332,1.56449532329816,12.8648187638577,1.38134921352481,13.0023019848954,7.21879481669586,4.49565840151407,5.05754070234305,4.82022059766964,4.52205288202815,3.4860711054785,2.37270619111097,2.42696354688296,5.101758093259,4.23221872641029,0,0,0.4115740113314,0,5.07020139287323,2.94848165003288,4.13552934676983,0,1.10689594688802,1.88724591328378,1.75600456653801,0,3.21692711717219,2.03694579348765,0,0,4.3299402607582,1.04337364477569,0.234817388471643,2.16549671641611,3.70388410061289,2.09279567458058,3.1608175918371,2.57545848628462,0.738651018262192,0.702012795417713,1.93220510975347,0,1.84780341018745,1.13420077793909,1.43293636324557,1.45316969256981,3.4504441124869,0,0.088048434013226,0.414656231081544,0.288239906833923,0.12624243342638,0.507983154337352,0,0,1.71072446022705,3.08482478109971,3.30377363628309,1.14330573052231,0.784917590417525,0.87192013766656,1.0267360014933,0.517086863031111,3.57656445851882,10.143633030672,1.32969058292435,5.2003718455683,1.02882949704857,1.41849132023278,1.5985330740966,5.00422977803516,4.34097284313154,3.29296134712308,3.58309802723109,5.33087923113819,6.33561498346743,0.904318131178758,0.871533458600294,1.49959486773086,4.86495122564762,0,6.32501818449095,1.67737398844108,3.44585807502342,0,5.06734573336527,6.78071864416265,0.358121926479791,0.112085143993527,0.197030760201927,0.215627574859517,0,1.27047312111232,0,2.31986643833309,1.00509759200609,3.18969375826582,0,8.97484377612075,0,2.82190430954022,4.50153468953709,2.98391526069709,7.48695101510906,25.1584874203998,8.2005255817646,1.87426263988341,1.50473049863859,2.27407504055985,1.03473071292505,0.664225598535437,2.58116835958384,4.34418072340414,0.587403472388222,1.37257369524342,0,0.431428401637234,0.106727557803444,0.606255142892519,4.99306318531491,4.23346410661552,2.23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| |||
|short_description=p@chr2:242173297..242173311,- | |||
}} |
Revision as of 09:39, 21 January 2014
Short description: | p@chr2:242173297..242173311, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:242173297..242173311, - |
Coexpression cluster: | C4212_Olfactory_Smooth_tenocyte_pancreas_leiomyoma_Preadipocyte_parotid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 2.01e-09 | 61 |
electrically active cell | 2.01e-09 | 61 |
muscle precursor cell | 9.43e-09 | 58 |
myoblast | 9.43e-09 | 58 |
multi-potent skeletal muscle stem cell | 9.43e-09 | 58 |
embryonic cell | 1.28e-08 | 250 |
fibroblast | 1.88e-08 | 76 |
muscle cell | 2.59e-08 | 55 |
smooth muscle cell | 2.15e-07 | 43 |
smooth muscle myoblast | 2.15e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 1.96e-09 | 73 |
somite | 2.28e-09 | 71 |
presomitic mesoderm | 2.28e-09 | 71 |
presumptive segmental plate | 2.28e-09 | 71 |
dermomyotome | 2.28e-09 | 71 |
trunk paraxial mesoderm | 2.28e-09 | 71 |
multilaminar epithelium | 3.60e-09 | 83 |
paraxial mesoderm | 5.55e-09 | 72 |
presumptive paraxial mesoderm | 5.55e-09 | 72 |
trunk mesenchyme | 1.73e-08 | 122 |
unilaminar epithelium | 2.80e-08 | 148 |
skeletal muscle tissue | 4.51e-08 | 62 |
striated muscle tissue | 4.51e-08 | 62 |
myotome | 4.51e-08 | 62 |
epithelial vesicle | 7.01e-08 | 78 |
muscle tissue | 2.45e-07 | 64 |
musculature | 2.45e-07 | 64 |
musculature of body | 2.45e-07 | 64 |
splanchnic layer of lateral plate mesoderm | 2.46e-07 | 83 |
adipose tissue | 3.54e-07 | 14 |
artery | 3.73e-07 | 42 |
arterial blood vessel | 3.73e-07 | 42 |
arterial system | 3.73e-07 | 42 |
mesenchyme | 4.20e-07 | 160 |
entire embryonic mesenchyme | 4.20e-07 | 160 |
surface structure | 9.79e-07 | 99 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.51e-07 | 14 |