FFCP PHASE1:Hg19::chr2:228246418..228246451,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79853 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26230 | |||
|TSSclassifier=not | |||
|UniProt=C9JES4 | |||
|association_with_transcript=259bp_to_ENST00000449706_5end | |||
|coexpression_cluster_id=C465 | |||
|description=CAGE_peak_3_at_TM4SF20_5end | |||
|id=chr2:228246418..228246451,- | |||
|ontology_enrichment_celltype=CL:0000057!4.36e-18!75;CL:0002620!2.11e-13!23;CL:0000197!1.21e-12!6;CL:0000098!1.21e-12!6;CL:0002167!1.21e-12!6;CL:0002556!9.42e-12!6;CL:0000055!1.10e-11!180 | |||
|ontology_enrichment_celltype_v019=CL:0000197;2.12e-24;6!CL:0000098;2.12e-24;6!CL:0002167;2.12e-24;6!CL:0002552;5.89e-08;5!CL:0000710;1.94e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000197,2.12e-24,6;CL:0000098,2.12e-24,6;CL:0002167,2.12e-24,6;CL:0000057,5.49e-12,76;CL:0002552,5.89e-08,5;CL:0000710,1.94e-07,20;CL:0002556,9.69e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0003099;2.59e-10;1!UBERON:0003852;2.59e-10;1 | |||
|ontology_enrichment_disease=DOID:17!3.69e-14!5;DOID:450!3.69e-14!5;DOID:66!3.69e-14!5;DOID:423!3.69e-14!5;DOID:0080000!3.69e-14!5;DOID:11722!3.69e-14!5 | |||
|ontology_enrichment_disease_v019=DOID:17;4.47e-16;5!DOID:450;4.47e-16;5!DOID:66;4.47e-16;5!DOID:423;4.47e-16;5!DOID:0080000;4.47e-16;5!DOID:11722;4.47e-16;5!DOID:2513;2.16e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:17,5.09e-16,5;DOID:450,5.09e-16,5;DOID:66,5.09e-16,5;DOID:423,5.09e-16,5;DOID:0080000,5.09e-16,5;DOID:11722,5.09e-16,5;DOID:2513,2.16e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0003102!7.25e-12!95;UBERON:0001758!9.42e-12!6;UBERON:0003672!9.42e-12!6;UBERON:0002097!8.59e-11!40;UBERON:0003129!9.39e-10!11;UBERON:0002199!2.39e-09!45;UBERON:0002416!2.39e-09!45;UBERON:0000075!3.34e-08!13;UBERON:0005944!3.34e-08!13;UBERON:0004288!3.34e-08!13;UBERON:0003089!3.34e-08!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0005705;2.59e-10;1!UBERON:0008193;2.59e-10;1!UBERON:0010912;2.59e-10;1!UBERON:0002514;2.59e-10;1!UBERON:0003457;2.59e-10;1!UBERON:0008907;2.59e-10;1!UBERON:0008001;2.59e-10;1!UBERON:0007213;2.59e-10;1!UBERON:0009891;2.59e-10;1!UBERON:0007914;2.59e-10;1!UBERON:0007375;2.59e-10;1!UBERON:0003323;2.59e-10;1!UBERON:0010258;2.59e-10;1!UBERON:0005253;2.59e-10;1!UBERON:0007842;2.59e-10;1!UBERON:0002397;2.59e-10;1!UBERON:0003113;2.59e-10;1!UBERON:0003277;2.59e-10;1!UBERON:0001709;2.59e-10;1!UBERON:0002244;2.59e-10;1!UBERON:0005620;2.59e-10;1!UBERON:0010364;2.59e-10;1!UBERON:0004288;2.59e-10;1!UBERON:0007195;7.54e-10;1!UBERON:0011137;9.79e-08;11!UBERON:0010323;9.79e-08;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005705,2.59e-10,1;UBERON:0008193,2.59e-10,1;UBERON:0010912,2.59e-10,1;UBERON:0002514,2.59e-10,1;UBERON:0003457,2.59e-10,1;UBERON:0008907,2.59e-10,1;UBERON:0008001,2.59e-10,1;UBERON:0007213,2.59e-10,1;UBERON:0009891,2.59e-10,1;UBERON:0007914,2.59e-10,1;UBERON:0009292,2.59e-10,1;UBERON:0003099,2.59e-10,1;UBERON:0007375,2.59e-10,1;UBERON:0003323,2.59e-10,1;UBERON:0010258,2.59e-10,1;UBERON:0007842,2.59e-10,1;UBERON:0009494,2.59e-10,1;UBERON:0010042,2.59e-10,1;UBERON:0010045,2.59e-10,1;UBERON:0010259,2.59e-10,1;UBERON:0010359,2.59e-10,1;UBERON:0009526,2.59e-10,1;UBERON:0002397,2.59e-10,1;UBERON:0003113,2.59e-10,1;UBERON:0003277,2.59e-10,1;UBERON:0001709,2.59e-10,1;UBERON:0004066,2.59e-10,1;UBERON:0002244,2.59e-10,1;UBERON:0005620,2.59e-10,1;UBERON:0004362,2.59e-10,1;UBERON:0010364,2.59e-10,1;UBERON:0010046,2.59e-10,1;UBERON:0005868,2.59e-10,1;UBERON:0007238,2.59e-10,1;UBERON:0004288,2.59e-10,1;UBERON:0004068,2.59e-10,1;UBERON:0010334,2.59e-10,1;UBERON:0003852,2.59e-10,1;UBERON:0010253,2.59e-10,1;UBERON:0007195,8.99e-10,1;UBERON:0003102,6.88e-09,99;UBERON:0010323,9.25e-08,11;UBERON:0000165,1.93e-07,29;UBERON:0000930,1.93e-07,29;UBERON:0002097,3.38e-07,41;UBERON:0001758,9.69e-07,6;UBERON:0003672,9.69e-07,6 | |||
|phase1_expression=0,0.214100523890983,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50401373190767,0.289693037921647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37600571456411,3.21447008062124,0,0,0,0,0.277064115484183,0.877955241761676,4.29082914118628,1.50238058906597,0,0.358779271377724,1.2813443329114,3.39091041855299,0,1.03052529238439,0,0,0,0,0.252433774244115,1.93304787148829,0.646584227275248,0.355009592516614,0,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,4.17931135228781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0.12269149171914,0,0,14.1420185840949,43.7151022553046,54.2496307716735,38.6566669475954,1.20378439891088,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,1.40330047216537,0,2.04682899626681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.2409397954286,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.0730893170861856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378806010550178,1.0062716070103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.8168985922671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,1.73050624849516,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@TM4SF20 | |||
}} |
Revision as of 09:01, 21 January 2014
Short description: | p3@TM4SF20 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TM4SF20_5end |
Coexpression cluster: | C465_Olfactory_basal_Fibroblast_Preadipocyte_Adipocyte_small_Prostate |
Association with transcript: | 259bp_to_ENST00000449706_5end |
EntrezGene: | TM4SF20 |
HGNC: | 26230 |
UniProt: | C9JES4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 2.12e-24 | 6 |
sensory epithelial cell | 2.12e-24 | 6 |
olfactory epithelial cell | 2.12e-24 | 6 |
fibroblast | 5.49e-12 | 76 |
fibroblast of gingiva | 5.89e-08 | 5 |
neurecto-epithelial cell | 1.94e-07 | 20 |
fibroblast of periodontium | 9.69e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 5.09e-16 | 5 |
myotonic disease | 5.09e-16 | 5 |
muscle tissue disease | 5.09e-16 | 5 |
myopathy | 5.09e-16 | 5 |
muscular disease | 5.09e-16 | 5 |
myotonic dystrophy | 5.09e-16 | 5 |
basal cell carcinoma | 2.16e-10 | 1 |