FFCP PHASE1:Hg19::chr2:216262447..216262454,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2335 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=3778 | |||
|TSSclassifier=strong | |||
|UniProt=B4DU16 | |||
|association_with_transcript=78bp_to_AK300458_5end | |||
|coexpression_cluster_id=C79 | |||
|description=CAGE_peak_66_at_FN1_5end | |||
|id=chr2:216262447..216262454,- | |||
|ontology_enrichment_celltype=CL:0000055!7.62e-24!180;CL:0000057!6.38e-21!75;CL:0002371!3.94e-15!591;CL:0000144!1.38e-12!625;CL:0000048!2.01e-11!430;CL:0000723!2.12e-11!436;CL:0000034!1.95e-10!444;CL:0000680!4.62e-10!57;CL:0000056!4.62e-10!57;CL:0000355!4.62e-10!57;CL:0002334!2.70e-09!12;CL:0000187!8.47e-09!54;CL:0002620!1.52e-08!23;CL:0000183!2.52e-08!59;CL:0000548!3.02e-08!679;CL:0000004!3.02e-08!679;CL:0000255!3.02e-08!679;CL:0000012!5.94e-08!682;CL:0000393!5.65e-07!60;CL:0000211!5.65e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0002334;4.12e-18;12!CL:0002580;3.22e-10;3!CL:0002579;5.53e-09;3!CL:0000197;2.60e-08;6!CL:0000098;2.60e-08;6!CL:0002167;2.60e-08;6!CL:0000723;1.02e-07;61!CL:0002561;4.43e-07;2!CL:0000134;5.54e-07;55!CL:0002600;6.83e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,7.47e-18,12;CL:0002580,3.11e-10,3;CL:0000057,7.31e-09,76;CL:0002579,1.06e-08,3;CL:0000197,2.94e-08,6;CL:0000098,2.94e-08,6;CL:0002167,2.94e-08,6;CL:0002561,3.60e-07,2;CL:0002600,6.57e-07,2;CL:0000048,8.53e-07,427 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!6.20e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;3.25e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.59e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!5.76e-12!83;UBERON:0002329!5.76e-12!83;UBERON:0003077!5.76e-12!83;UBERON:0003059!5.76e-12!83;UBERON:0007282!5.76e-12!83;UBERON:0009618!5.76e-12!83;UBERON:0007285!5.76e-12!83;UBERON:0004290!1.48e-10!70;UBERON:0005256!6.23e-10!143;UBERON:0002385!9.30e-09!63;UBERON:0001015!9.30e-09!63;UBERON:0000383!9.30e-09!63;UBERON:0001134!1.07e-08!61;UBERON:0002036!1.07e-08!61;UBERON:0003082!1.07e-08!61;UBERON:0000486!1.82e-08!82;UBERON:0004923!1.91e-08!57;UBERON:0002199!7.54e-08!45;UBERON:0002416!7.54e-08!45;UBERON:0002100!3.09e-07!216;UBERON:0000948!6.27e-07!24;UBERON:0005498!6.27e-07!24;UBERON:0004140!6.27e-07!24;UBERON:0009881!6.27e-07!24;UBERON:0004141!6.27e-07!24;UBERON:0003084!6.27e-07!24;UBERON:0007005!6.27e-07!24;UBERON:0004139!6.27e-07!24;UBERON:0004291!6.27e-07!24;UBERON:0002097!7.28e-07!40;UBERON:0002384!9.80e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;6.82e-12;6!UBERON:0002358;6.82e-12;6!UBERON:0003684;6.82e-12;6!UBERON:0001178;6.82e-12;6!UBERON:0004457;8.17e-08;9!UBERON:0000042;8.17e-08;9!UBERON:0005933;4.43e-07;2!UBERON:0005942;4.43e-07;2!UBERON:0005932;4.43e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.62e-11,6;UBERON:0002358,1.62e-11,6;UBERON:0003684,1.62e-11,6;UBERON:0001178,1.62e-11,6;UBERON:0005933,3.60e-07,2;UBERON:0005942,3.60e-07,2;UBERON:0005932,3.60e-07,2 | |||
|phase1_expression=0.726713517082227,2.5692062866918,1.12763523276777,3.00219895059391,0,0,0,1.26343974685366,0,0,0,0.436882744260345,0.791300934685361,0.618831764800233,0.331397375727916,0.672325146451775,0.602694528023977,0,0.487932798790507,0,0,0.313454721478088,0,0.136874425072884,0,0,0,0,0,0,0.154816123316076,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.1903433156981,0.670700859703636,0.383587685530591,0.361439152384566,0,0.289693037921647,7.15757352345989,14.5990461090791,0,1.10864698731282,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0.275118041940067,0.417989933073621,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,2.98183171017191,0.886413581652058,1.58891016975863,1.14734648299525,0,0.560677600142307,0,1.72667283892012,0.933633106199299,0.538842688278752,0.326923806226917,1.66493170409425,1.15235184896,0,0.312160076830321,0.570471821544449,0.747243402759005,0.469737994575059,0.323745888736263,0.140450806702248,0.61246251376468,0.61417158655884,0.723280468230358,0,0.247266929278557,0.910161361938026,0,0.673344455816265,0.375355559615893,0.277064115484183,0,0.919463387397059,0.45071417671979,0.226864366320042,0.89694817844431,0.427114777637135,1.05965950579781,0.900273288253207,0.618315175430633,0.772921620136887,0,0.843881661206331,0.292311015483596,1.51460264546469,0.552299391853796,0.646584227275248,0.355009592516614,0.403008392910561,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,4.17931135228781,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0.122988438543114,0.171567810298526,0.548751427043128,0,0,0.0925884451585296,0.325808305310325,0,1.44331342025273,0,0.70445216541493,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0.895585227028483,1.16253575405585,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.224262168690721,0,0.2933531432838,0.517086863031111,0,2.535908257668,0,1.04007436911366,0.257207374262142,0,0.799266537048298,0.428933980974443,0,0.823240336780769,0.65147236858747,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.289562613335158,0.821905290201534,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,2.00068208423871,0.271265023699736,3.11956292296211,5.53129865271201,1.26161932027148,1.17141414992713,0.902838299183157,2.27407504055985,0,0.664225598535437,0.737476674166813,0.260650843404249,0.195801157462741,0,0,0,0,0,0,0.604780586659361,2.23297027036899,2.91577749247319,3.08726103876381,1.02511319404561,1.02341449813341,1.60853921143608,0,1.54209693802656,1.24293207719189,0.574890092096664,1.03850885836724,0.581051892299796,0,2.6065841139427,0,0,0.364182336013434,0.262248829918848,0,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0.254876273045038,0,0.223874754722178,0,0,0,0.328014645699706,0,0.309123034943167,0,0,0.574265537996172,0.650060246036521,0,0.48335359146061,0.462145851343933,0.460511024178389,0,1.71872391789238,1.16013355131383,0.340906509664404,0.979352392114111,0.991709492165869,0.576570202095319,0.510450849978337,0.4046311234222,0,3.77774816196768,0,0,0,0.869932992075073,0.18532421910392,0,0.744316738719335,0.949138274156178,0.571890581771475,0,0.42793898803392,0,0,0,0.54907405947211,0.353437207037059,0.202182481573316,0,0,0,0,0,0.545999645631943,0.282810863907425,0,0,1.99031692572366,0,2.31510213706675,1.31178950409327,1.01455188481352,0.30982349809975,0.281695602532241,0.143411352204052,0.687743287091848,0.35667105148125,0.354761064070598,0.422215270595328,0.987884678879706,0.379473173765715,0.349934720244983,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43246690842614,0,0.614321404198464,0,0,1.78093928036649,0,0,0.398495976502139,0,0,0,0,2.79935628895627,0,0,0,0.493217028184668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.455768223388005,0,0,0,5.74202087517455,0.274792780205587,24.5195996968572,0,0,0,0,0,0,0,0,0,0,0.565412285735763,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0.866851769704557,0,0,0,0,0,0.837847203816763,0.458320848023367,0,0,0,0,0.0671834724867263,2.16179930125442,0,0.236349546921671,0.576911008668165,0.202210631562555,0.196854963029498,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0.864221491201268,0.653174720218818,0,0,0.851940108927109,0,0.146552233678082,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.74627401443437,2.10341978862502,0.554805861502613,0.757612021100357,1.76097531226803,1.77962244319307,1.14420034198462,1.51230923763239,0.310874401165561,0.295710299979268,0.159296767163702,1.34940933649081,0.310525913752519,1.65882483136342,2.39257543102195,3.65221543268214,0.150257608997218,0,0.406870733204662,0.181848659202559,0.537052785212442,2.32016879939247,2.3885753321917,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| |||
|short_description=p66@FN1 | |||
}} |
Revision as of 08:23, 21 January 2014
Short description: | p66@FN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_66_at_FN1_5end |
Coexpression cluster: | C79_chorionic_Chondrocyte_Cardiac_Smooth_Fibroblast_Preadipocyte_Mesenchymal |
Association with transcript: | 78bp_to_AK300458_5end |
EntrezGene: | FN1 |
HGNC: | 3778 |
UniProt: | B4DU16 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 7.47e-18 | 12 |
preadipocyte of the breast | 3.11e-10 | 3 |
fibroblast | 7.31e-09 | 76 |
omentum preadipocyte | 1.06e-08 | 3 |
receptor cell | 2.94e-08 | 6 |
sensory epithelial cell | 2.94e-08 | 6 |
olfactory epithelial cell | 2.94e-08 | 6 |
outer root sheath cell | 3.60e-07 | 2 |
smooth muscle cell of trachea | 6.57e-07 | 2 |
multi fate stem cell | 8.53e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.62e-11 | 6 |
peritoneum | 1.62e-11 | 6 |
abdominal cavity | 1.62e-11 | 6 |
visceral peritoneum | 1.62e-11 | 6 |
hair root sheath | 3.60e-07 | 2 |
hair outer root sheath | 3.60e-07 | 2 |
bulb of hair follicle | 3.60e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.59e-07 | 14 |