FFCP PHASE1:Hg19::chr2:171608209..171608242,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=37626 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000543391_5end | |||
|coexpression_cluster_id=C364 | |||
|description=CAGE_peak_1_at_EIF2S2P4_5end | |||
|id=chr2:171608209..171608242,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.66e-27!42;CL:0000860!1.72e-25!45;CL:0000839!2.74e-17!70;CL:0000557!1.54e-15!71;CL:0002009!3.69e-15!65;CL:0002194!5.22e-15!63;CL:0000576!5.22e-15!63;CL:0000040!5.22e-15!63;CL:0000559!5.22e-15!63;CL:0000766!3.07e-13!76;CL:0000763!3.42e-12!112;CL:0000049!3.42e-12!112;CL:0002031!9.48e-11!124;CL:0002032!1.35e-08!165;CL:0000837!1.35e-08!165;CL:0000738!3.35e-08!140;CL:0002087!5.60e-08!119;CL:0000037!7.33e-08!172;CL:0000566!7.33e-08!172;CL:0000988!5.79e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.41e-40;33!CL:0002057;1.41e-40;33!CL:0000473;9.42e-30;39!CL:0000234;9.42e-30;39!CL:0000576;3.43e-21;48!CL:0000766;3.81e-11;69!CL:0000197;5.17e-11;6!CL:0000098;5.17e-11;6!CL:0002167;5.17e-11;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.99e-40,42;CL:0002057,4.99e-40,42;CL:0000473,5.04e-36,48;CL:0000234,5.04e-36,48;CL:0002009,2.79e-27,61;CL:0002194,1.20e-26,59;CL:0000576,1.20e-26,59;CL:0000040,1.20e-26,59;CL:0000559,1.20e-26,59;CL:0000839,1.90e-26,66;CL:0000557,6.53e-24,67;CL:0000766,4.87e-20,72;CL:0000763,1.70e-19,108;CL:0000049,1.70e-19,108;CL:0002031,1.39e-11,120;CL:0000197,2.56e-11,6;CL:0000098,2.56e-11,6;CL:0002167,2.56e-11,6;CL:0002032,6.77e-10,161;CL:0000837,6.77e-10,161;CL:0002087,8.66e-10,115;CL:0000037,4.97e-09,168;CL:0000738,8.28e-09,136;CL:0000988,4.93e-08,177 | |||
|ontology_enrichment_development_v019=CL:0002057;3.04e-30;42!CL:0000049;2.05e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.42e-13!80;UBERON:0001474!4.17e-12!86;UBERON:0004765!2.00e-10!101;UBERON:0001434!2.00e-10!101;UBERON:0002390!5.55e-09!102;UBERON:0003061!5.55e-09!102;UBERON:0002405!6.32e-09!115;UBERON:0001737!2.78e-08!9;UBERON:0002193!6.92e-08!112;UBERON:0002204!2.26e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;8.32e-15;9!UBERON:0001557;8.32e-15;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.23e-21,76;UBERON:0001474,6.64e-19,82;UBERON:0004765,8.84e-19,90;UBERON:0002405,1.35e-16,93;UBERON:0001434,7.90e-16,100;UBERON:0001737,8.49e-15,9;UBERON:0002390,3.62e-14,98;UBERON:0003061,3.62e-14,98;UBERON:0002193,7.05e-13,108;UBERON:0002204,1.34e-10,167;UBERON:0001557,2.60e-07,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6893005858071,1.80808358407193,0,0.975865597581014,0,0,0,0,0,0,0.0764134057479513,0,0.0787107813136792,0,0,0.464448369948228,0,0,0,0,0,0.587200878669695,0,0,0,0,0,0,1.45398238779565,2.26725566213286,1.21292030593908,2.09186133215116,9.04569353648017,6.19412741790207,6.04154023876516,3.33008918487831,6.3850202069918,2.75796544589295,1.93645405075148,2.70852973188684,1.50593871634084,6.5497476013883,7.19115150224271,2.44867113896722,7.06043859567406,6.39337125799041,1.64925650093358,3.59034583718937,1.70489900213078,4.06292934080018,18.7237124148076,11.2108004819203,2.26123798731069,5.21482918420201,5.42972111762792,0.605399502633369,12.1531619875896,10.1267963981083,0.845021145247767,1.06302149982522,1.67726916406701,0.786300418025466,0.750884464207532,1.28580469357664,0.570025487482497,0.39783335439818,1.27864907635244,0,0,0,0,0.800791974072025,0.574752439954483,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0.501559486172034,0,0,1.94826728407911,0.891283655081389,0.589211814949674,0.664601683750863,0.541607727530031,0.640456598628376,0.390178042679635,0.328875809207352,0.276350017785848,0.289803085735052,0.296573126324121,0,0,0.226618685395132,0.383220493601921,0,1.01207876807801,0.318565414324097,0,0,0.301150238155546,0.255973222308837,1.24930726552346,0.236777252044017,0,0,0.267440195783507,0,0,0,7.41602858692476,0,0,0.144846518960824,0,0.486634870302636,0.0945348171640679,0,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0,3.17782033951725,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0.352303495931295,0.161872944368132,0,0,0,0.206651562351531,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0.423863802319124,0,0.206105058476878,0,0,1.0126579934476,0,0,0.0920498986422993,4.20279747728911,0,0,0.169560592310488,0,0,0,0,0,0,0,1.26160425437814,2.55484151353081,0,0,0,0,0,3.07597680103594,2.52877035117153,1.68707720918437,2.20587945464788,4.35758888184812,1.42362371466658,2.56179485504312,2.35465758150415,3.46272441251751,0,0,0,0,0,0,0,0,0.122988438543114,1.3725424823882,0,0,0.100528972411631,0,0,0,0,1.15930404975077,5.4007999348478,0,0,2.47330397904978,0,0,0,0,0,0.93733833986777,2.01578553838631,4.25325291727159,0.179117045405697,0.290633938513962,0,0,0.528290604079356,0.414656231081544,0.144119953416961,0.12624243342638,1.71444314588856,0,0,0,0,3.30377363628309,0.571652865261156,0,0,0,0,0,1.690605505112,0,0,0,0,0,0,0,0,0,0,0,0,1.74306691720059,0,0,2.51128545716063,0,0,0,8.5582143024431,0,0,0,0.112085143993527,0,0.215627574859517,0,0,0,0,0,3.82763250991898,0,0,0,0,0,0.271265023699736,4.78332981520856,5.70972764150918,3.31175071571263,3.86566669475954,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,4.14347327877769,0,0,0,0,0,0.308419387605311,0.177561725313127,0.0821271560138091,0,0.116210378459959,0,0,0,0,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,6.13927654608617,7.05875717767231,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0,0.137836572484531,0,0,0.0852266274161009,0,0.165284915360978,0,1.65896526242959,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0.136499911407986,0.282810863907425,1.13008116620243,0,0,0.438450885253763,0,0,0.202910376962704,0,0,2.00775893085672,4.32295780457733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0.199579371432817,0,0,3.24621940274555,0.280797178113459,0,0,2.50634477090067,2.37008488922245,0,0,0,0,0,0,0,0,0,0,6.22048060494761,0,0,0,0,0,0.334330152832435,0,0.71623345421307,1.18785872333055,0,0.994147647766298,0,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0.236387681767936,0.344743373241465,0.291604613383254,0,3.54296554325536,0,0,0.110579259931225,0,0,0.32681539055697,0,0,0.341826167541004,0,0,0,0.638002319463839,2.38153742844842,0,0,0,0,0,0,0,0.189753732724185,0,0,0.163232808159148,0,0,0,0.0884575645033392,0,0,0,0.104421949505455,0,0,0,0,0,0.242780379534093,0,0,0,0,0.150323419414493,0,0,0.330991955875499,0.313932918407225,0,0,0,0,0.0979923974143777,0,0,0.171986032471617,0,0.0730893170861856,0,0.0969890164884194,0.264768380074501,0,0.274083849293502,0,0,0.195551382734803,0,0,0,0.144090417154106,0,0.171594997861965,0.14405479798815,0,0.235694034616795,0,0.104602846312333,0.203996435272644,0,6.00420288709789,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0.360299883542404,0,0.0787831823072236,0.164831716762333,0,0.0984274815147488,0.169346664131569,0,0,2.25054407851027,1.78801267576404,5.40072439437941,3.14963448172101,0,0,0,0,0,0,0,0.191915197319445,0,0,0.25426853765475,0,0,0,0,0.082092520749339,0,0.113312091520126,0,0,2.06852730178481,0,0,0,0,0,0,0,0,0,0,0.544017803369474,0,0.306345576763462,0,0.157054096250234,1.77213635993397,1.95242023843141,0,3.44045517414043,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0.554805861502613,0,0,1.77962244319307,0,0,0,0.147855149989634,0,6.74704668245407,0,0.829412415681711,0.26584171455799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| |||
|short_description=p1@EIF2S2P4 | |||
}} |
Revision as of 06:33, 21 January 2014
Short description: | p1@EIF2S2P4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EIF2S2P4_5end |
Coexpression cluster: | C364_CD14_immature_CD14CD16_Aortic_CD4_Reticulocytes_Basophils |
Association with transcript: | 0bp_to_ENST00000543391_5end |
EntrezGene: | NA |
HGNC: | 37626 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.99e-40 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.99e-40 | 42 |
defensive cell | 5.04e-36 | 48 |
phagocyte | 5.04e-36 | 48 |
macrophage dendritic cell progenitor | 2.79e-27 | 61 |
monopoietic cell | 1.20e-26 | 59 |
monocyte | 1.20e-26 | 59 |
monoblast | 1.20e-26 | 59 |
promonocyte | 1.20e-26 | 59 |
myeloid lineage restricted progenitor cell | 1.90e-26 | 66 |
granulocyte monocyte progenitor cell | 6.53e-24 | 67 |
myeloid leukocyte | 4.87e-20 | 72 |
myeloid cell | 1.70e-19 | 108 |
common myeloid progenitor | 1.70e-19 | 108 |
hematopoietic lineage restricted progenitor cell | 1.39e-11 | 120 |
receptor cell | 2.56e-11 | 6 |
sensory epithelial cell | 2.56e-11 | 6 |
olfactory epithelial cell | 2.56e-11 | 6 |
hematopoietic oligopotent progenitor cell | 6.77e-10 | 161 |
hematopoietic multipotent progenitor cell | 6.77e-10 | 161 |
nongranular leukocyte | 8.66e-10 | 115 |
hematopoietic stem cell | 4.97e-09 | 168 |
leukocyte | 8.28e-09 | 136 |
hematopoietic cell | 4.93e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.23e-21 | 76 |
bone element | 6.64e-19 | 82 |
skeletal element | 8.84e-19 | 90 |
immune system | 1.35e-16 | 93 |
skeletal system | 7.90e-16 | 100 |
larynx | 8.49e-15 | 9 |
hematopoietic system | 3.62e-14 | 98 |
blood island | 3.62e-14 | 98 |
hemolymphoid system | 7.05e-13 | 108 |
musculoskeletal system | 1.34e-10 | 167 |
upper respiratory tract | 2.60e-07 | 19 |