FFCP PHASE1:Hg19::chr2:166651029..166651044,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2591 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4125 | |||
|TSSclassifier=strong | |||
|UniProt=C9J388 | |||
|association_with_transcript=115bp_to_ENST00000431484_5end | |||
|coexpression_cluster_id=C260 | |||
|description=CAGE_peak_11_at_GALNT3_5end | |||
|id=chr2:166651029..166651044,- | |||
|ontology_enrichment_celltype=CL:0000738!4.35e-35!140;CL:0000037!6.40e-35!172;CL:0000566!6.40e-35!172;CL:0002057!1.59e-34!42;CL:0000988!1.16e-31!182;CL:0000766!1.82e-31!76;CL:0000860!2.01e-31!45;CL:0002032!6.96e-31!165;CL:0000837!6.96e-31!165;CL:0002031!1.11e-27!124;CL:0000763!5.83e-27!112;CL:0000049!5.83e-27!112;CL:0002087!3.21e-26!119;CL:0000557!8.10e-26!71;CL:0000839!5.89e-25!70;CL:0002009!1.24e-21!65;CL:0002194!2.59e-21!63;CL:0000576!2.59e-21!63;CL:0000040!2.59e-21!63;CL:0000559!2.59e-21!63;CL:0002393!2.11e-10!9;CL:0002397!2.11e-10!9;CL:0000134!4.30e-08!358;CL:0002320!1.47e-07!365;CL:0002274!2.28e-07!5;CL:0000457!2.28e-07!5;CL:0002191!2.28e-07!5;CL:0000097!2.28e-07!5;CL:0000831!2.28e-07!5;CL:0002028!2.28e-07!5;CL:0000094!6.45e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.23e-13;33!CL:0002057;3.23e-13;33!CL:0000473;4.60e-10;39!CL:0000234;4.60e-10;39!CL:0000236;1.12e-09;13!CL:0000766;7.06e-09;69!CL:0000576;2.00e-08;48!CL:0002087;1.81e-07;104!CL:0000763;3.85e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.94e-20,42;CL:0002057,2.94e-20,42;CL:0002032,2.89e-19,161;CL:0000837,2.89e-19,161;CL:0000037,2.61e-18,168;CL:0000473,1.70e-17,48;CL:0000234,1.70e-17,48;CL:0000988,3.43e-17,177;CL:0000738,8.96e-17,136;CL:0002087,6.31e-16,115;CL:0000766,1.72e-15,72;CL:0000763,3.08e-15,108;CL:0000049,3.08e-15,108;CL:0002031,3.87e-15,120;CL:0002194,1.26e-13,59;CL:0000576,1.26e-13,59;CL:0000040,1.26e-13,59;CL:0000559,1.26e-13,59;CL:0002009,3.98e-13,61;CL:0000839,5.23e-12,66;CL:0000557,8.36e-12,67;CL:0000236,4.58e-09,14;CL:0002393,1.63e-08,9;CL:0002397,1.63e-08,9;CL:0000134,1.40e-07,354;CL:0002320,2.36e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;3.64e-15;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.26e-28!102;UBERON:0003061!5.26e-28!102;UBERON:0002193!4.57e-25!112;UBERON:0001474!7.80e-23!86;UBERON:0002371!8.09e-23!80;UBERON:0004765!2.09e-17!101;UBERON:0001434!2.09e-17!101;UBERON:0002405!8.47e-17!115;UBERON:0002384!1.39e-07!375;UBERON:0002204!3.05e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,2.85e-11,82;UBERON:0002390,9.24e-11,98;UBERON:0003061,9.24e-11,98;UBERON:0002371,3.30e-10,76;UBERON:0004765,4.27e-10,90;UBERON:0002193,1.46e-09,108;UBERON:0001434,6.88e-09,100;UBERON:0002405,5.00e-08,93;UBERON:0002384,4.82e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,1.57345710739562,0.383829398097213,0.464448369948228,0,0,0,0,0,0.587200878669695,2.76997704265939,1.80490002723128,0,0.223915474239924,0,0,0.145398238779565,1.13362783106643,0.242584061187816,0.697287110717054,0,0,0.28769239232215,1.2808035326455,0.236482229888585,1.72372840368309,0.645484683583826,0,0.564727018627814,0.272906150057846,1.12361742222542,0.918251677112708,0.641858054152187,1.91801137739712,0.659702600373432,0.398927315243264,2.13112375266347,0.580418477257168,0,0,0.251248665256743,1.0429658368404,0.434377689410233,1.21079900526674,0.736555271975129,0,0.211255286311942,0.850417199860174,0.209658645508376,0.336985893439485,0,0.48217676009124,2.28010194992999,0.39783335439818,0.547992461293902,0,0,0,0,0,0,1.32208974556972,0.954053754535364,2.27685187643779,1.76171156811282,1.52909291250092,0,1.12101712596307,0.263384084775077,0,0.786021525498329,0,0,0,0,0,0,0.294605907474837,0.221533894583621,0.812411591295047,0,0.130059347559878,0.328875809207352,0,0,0,0,0,0,0,0,0,0,0,0.950452044448374,0.451725357233318,0,0,0.236777252044017,0,1.00803371612366,0.534880391567015,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0.238490624305342,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0.121973706129595,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0.0895585227028483,0,0,0.492663237895943,0.264145302039678,0.829312462163088,0.576479813667846,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0.985153801009636,0.646882724578552,1.02674429023799,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,0.862856803274467,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0.507447609232169,0,0,0.476463550915578,0,1.29694662238543,0,1.58625035258854,0,0,0,0,0,0,0,17.1638259432222,1.53204296105893,0,0.324621940274555,0,0,0.47003968731907,0,0,0,0,0,0.343505344755765,0,0,0,0.19538809540204,0,0,0,0,0,0.37428108081644,0.146508179271894,0,0.445773537109913,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0.359473404589307,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0.0769502585037971,0.113942055847001,0,0,0.108647371922008,0,0,0,0,4.70940769185074,0.166211681900156,0,0,0,0,0,0,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207376382794494,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0.193978032976839,0,0.225980740780532,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0.335434687599266,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0.106787412567695,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157723490002507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.76857044137197,0,0.20170506870352,0,0,0.163771917510097,0,0.0675375846183947,0.781078098613847,0,0,0,0.548257766857182,0,0.351742488719241,0.383287282918786,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0.281951753939561,0.257831551894309,0,0,0,0,0,0,0.286679166302903,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0,0.0645889098360061,0,0,0.0636471582781649,0,0.217716747896961,0,0.134704106029175,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p11@GALNT3 | |||
}} |
Revision as of 06:25, 21 January 2014
Short description: | p11@GALNT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_GALNT3_5end |
Coexpression cluster: | C260_acute_chronic_Natural_NK_Basophils_biphenotypic_blood |
Association with transcript: | 115bp_to_ENST00000431484_5end |
EntrezGene: | GALNT3 |
HGNC: | 4125 |
UniProt: | C9J388 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.94e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.94e-20 | 42 |
hematopoietic oligopotent progenitor cell | 2.89e-19 | 161 |
hematopoietic multipotent progenitor cell | 2.89e-19 | 161 |
hematopoietic stem cell | 2.61e-18 | 168 |
defensive cell | 1.70e-17 | 48 |
phagocyte | 1.70e-17 | 48 |
hematopoietic cell | 3.43e-17 | 177 |
leukocyte | 8.96e-17 | 136 |
nongranular leukocyte | 6.31e-16 | 115 |
myeloid leukocyte | 1.72e-15 | 72 |
myeloid cell | 3.08e-15 | 108 |
common myeloid progenitor | 3.08e-15 | 108 |
hematopoietic lineage restricted progenitor cell | 3.87e-15 | 120 |
monopoietic cell | 1.26e-13 | 59 |
monocyte | 1.26e-13 | 59 |
monoblast | 1.26e-13 | 59 |
promonocyte | 1.26e-13 | 59 |
macrophage dendritic cell progenitor | 3.98e-13 | 61 |
myeloid lineage restricted progenitor cell | 5.23e-12 | 66 |
granulocyte monocyte progenitor cell | 8.36e-12 | 67 |
B cell | 4.58e-09 | 14 |
intermediate monocyte | 1.63e-08 | 9 |
CD14-positive, CD16-positive monocyte | 1.63e-08 | 9 |
mesenchymal cell | 1.40e-07 | 354 |
connective tissue cell | 2.36e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone element | 2.85e-11 | 82 |
hematopoietic system | 9.24e-11 | 98 |
blood island | 9.24e-11 | 98 |
bone marrow | 3.30e-10 | 76 |
skeletal element | 4.27e-10 | 90 |
hemolymphoid system | 1.46e-09 | 108 |
skeletal system | 6.88e-09 | 100 |
immune system | 5.00e-08 | 93 |
connective tissue | 4.82e-07 | 371 |