FFCP PHASE1:Hg19::chr2:162281180..162281191,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57282 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13811 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=337bp_to_ENST00000482861_5end | |||
|coexpression_cluster_id=C1396 | |||
|description=CAGE_peak_8_at_SLC4A10_5end | |||
|id=chr2:162281180..162281191,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006238;2.42e-11;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002619!5.86e-94!22;UBERON:0001950!6.47e-93!20;UBERON:0000956!1.26e-82!25;UBERON:0000203!1.26e-82!25;UBERON:0001869!5.13e-78!32;UBERON:0001893!2.72e-73!34;UBERON:0002791!1.26e-68!33;UBERON:0002020!1.54e-66!34;UBERON:0003528!1.54e-66!34;UBERON:0002780!2.70e-60!41;UBERON:0001890!2.70e-60!41;UBERON:0006240!2.70e-60!41;UBERON:0003080!8.76e-59!42;UBERON:0005743!2.56e-48!86;UBERON:0001017!2.57e-47!82;UBERON:0000073!1.58e-46!94;UBERON:0001016!1.58e-46!94;UBERON:0000955!1.15e-44!69;UBERON:0006238!1.15e-44!69;UBERON:0003056!4.52e-43!61;UBERON:0001049!2.32e-42!57;UBERON:0005068!2.32e-42!57;UBERON:0006241!2.32e-42!57;UBERON:0007135!2.32e-42!57;UBERON:0002616!8.62e-41!59;UBERON:0000200!8.72e-34!6;UBERON:0003075!3.69e-32!86;UBERON:0007284!3.69e-32!86;UBERON:0002346!1.60e-30!90;UBERON:0001872!2.07e-28!5;UBERON:0002021!3.07e-28!5;UBERON:0000033!2.18e-27!123;UBERON:0000153!7.04e-26!129;UBERON:0007811!7.04e-26!129;UBERON:0007023!4.82e-25!115;UBERON:0001871!6.01e-25!7;UBERON:0004121!1.15e-23!169;UBERON:0000924!5.41e-23!173;UBERON:0006601!5.41e-23!173;UBERON:0002771!6.88e-18!3;UBERON:0001870!3.31e-12!2;UBERON:0000349!1.84e-10!5;UBERON:0000025!2.76e-09!194;UBERON:0000064!1.27e-08!219;UBERON:0002702!3.17e-07!1;UBERON:0002022!4.51e-07!1;UBERON:0007190!5.06e-07!1;UBERON:0002902!7.15e-07!1;UBERON:0009899!7.15e-07!1;UBERON:0002581!8.02e-07!1;UBERON:0003112!8.49e-07!1;UBERON:0000032!8.49e-07!1;UBERON:0005253!8.49e-07!1;UBERON:0003128!8.49e-07!1;UBERON:0002241!8.49e-07!1;UBERON:0001703!8.49e-07!1;UBERON:0004761!8.49e-07!1;UBERON:0009617!8.49e-07!1;UBERON:0001882!9.51e-07!1;UBERON:0005403!9.51e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001872;2.27e-23;5!UBERON:0001950;5.48e-22;20!UBERON:0002619;3.94e-20;22!UBERON:0000956;7.03e-18;25!UBERON:0000203;7.03e-18;25!UBERON:0002771;1.43e-15;2!UBERON:0001893;6.11e-15;34!UBERON:0001869;1.15e-13;32!UBERON:0003528;5.06e-13;34!UBERON:0002020;5.06e-13;34!UBERON:0002791;2.15e-12;32!UBERON:0001017;3.78e-10;75!UBERON:0000955;5.60e-10;68!UBERON:0001016;9.24e-10;83!UBERON:0002780;2.14e-07;41!UBERON:0001890;2.14e-07;41!UBERON:0002021;5.23e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001872,2.54e-23,5;UBERON:0001950,5.79e-22,20;UBERON:0002619,4.14e-20,22;UBERON:0000956,7.34e-18,25;UBERON:0000203,7.34e-18,25;UBERON:0001017,6.63e-17,81;UBERON:0002771,1.33e-15,2;UBERON:0001016,2.81e-15,89;UBERON:0000955,8.34e-15,68;UBERON:0006238,8.34e-15,68;UBERON:0002791,3.41e-14,32;UBERON:0001869,3.41e-14,32;UBERON:0003528,2.05e-13,34;UBERON:0002020,2.05e-13,34;UBERON:0001893,2.05e-13,34;UBERON:0002780,2.90e-11,41;UBERON:0001890,2.90e-11,41;UBERON:0003080,2.90e-11,41;UBERON:0006240,2.90e-11,41;UBERON:0000073,7.27e-09,53;UBERON:0002616,7.27e-09,53;UBERON:0001049,2.02e-08,56;UBERON:0005068,2.02e-08,56;UBERON:0006241,2.02e-08,56;UBERON:0007135,2.02e-08,56;UBERON:0004121,3.72e-08,171;UBERON:0000924,3.72e-08,171;UBERON:0006601,3.72e-08,171;UBERON:0003056,8.93e-08,61;UBERON:0002021,5.38e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335032530668698,2.55175500661265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371072392647405,7.98455192004777,0,0,0,0,0,0,0,0,0.520874984799877,0,0,0,0,0,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61214552326098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0.544813624446302,0,0,0,0,0,0.485996453264197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,4.51497180137264,0.250381861413,0,0,0,2.90532133366085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0.256916900385838,4.25089728976755,0.478901577171454,0.205116364240755,0.504143392443436,0.345786262321089,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472763092328763,2.34323429584154,0.413373593002368,0.380494861163441,1.64092442705466,0,0,0,0,0,0,0,0,0,0,0,0,0.328863867814245,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407948941145488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p8@SLC4A10 | |||
}} |
Revision as of 06:17, 21 January 2014
Short description: | p8@SLC4A10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SLC4A10_5end |
Coexpression cluster: | C1396_brain_medial_parietal_occipital_Neurons_medulloblastoma_olfactory |
Association with transcript: | 337bp_to_ENST00000482861_5end |
EntrezGene: | SLC4A10 |
HGNC: | 13811 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
parietal lobe | 2.54e-23 | 5 |
neocortex | 5.79e-22 | 20 |
regional part of cerebral cortex | 4.14e-20 | 22 |
cerebral cortex | 7.34e-18 | 25 |
pallium | 7.34e-18 | 25 |
central nervous system | 6.63e-17 | 81 |
middle temporal gyrus | 1.33e-15 | 2 |
nervous system | 2.81e-15 | 89 |
brain | 8.34e-15 | 68 |
future brain | 8.34e-15 | 68 |
regional part of telencephalon | 3.41e-14 | 32 |
cerebral hemisphere | 3.41e-14 | 32 |
brain grey matter | 2.05e-13 | 34 |
gray matter | 2.05e-13 | 34 |
telencephalon | 2.05e-13 | 34 |
regional part of forebrain | 2.90e-11 | 41 |
forebrain | 2.90e-11 | 41 |
anterior neural tube | 2.90e-11 | 41 |
future forebrain | 2.90e-11 | 41 |
regional part of nervous system | 7.27e-09 | 53 |
regional part of brain | 7.27e-09 | 53 |
neural tube | 2.02e-08 | 56 |
neural rod | 2.02e-08 | 56 |
future spinal cord | 2.02e-08 | 56 |
neural keel | 2.02e-08 | 56 |
ectoderm-derived structure | 3.72e-08 | 171 |
ectoderm | 3.72e-08 | 171 |
presumptive ectoderm | 3.72e-08 | 171 |
pre-chordal neural plate | 8.93e-08 | 61 |
occipital lobe | 5.38e-07 | 5 |