FFCP PHASE1:Hg19::chr2:145277589..145277612,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9839 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14881 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-20bp_to_ENST00000558170_5end | |||
|coexpression_cluster_id=C2325 | |||
|description=CAGE_peak_12_at_ZEB2_5end | |||
|id=chr2:145277589..145277612,- | |||
|ontology_enrichment_celltype=CL:0000763!1.14e-43!112;CL:0000049!1.14e-43!112;CL:0000766!2.35e-38!76;CL:0000839!1.61e-36!70;CL:0000557!3.75e-35!71;CL:0002194!3.24e-33!63;CL:0000576!3.24e-33!63;CL:0000040!3.24e-33!63;CL:0000559!3.24e-33!63;CL:0000037!1.05e-31!172;CL:0000566!1.05e-31!172;CL:0002009!3.35e-31!65;CL:0002057!8.44e-31!42;CL:0002032!2.20e-29!165;CL:0000837!2.20e-29!165;CL:0000988!3.91e-28!182;CL:0000860!4.67e-27!45;CL:0000738!4.38e-23!140;CL:0002031!8.38e-20!124;CL:0002087!5.61e-19!119;CL:0002393!1.84e-07!9;CL:0002397!1.84e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.08e-36;33!CL:0002057;1.08e-36;33!CL:0000576;6.55e-36;48!CL:0000473;3.53e-35;39!CL:0000234;3.53e-35;39!CL:0000766;9.53e-32;69!CL:0000763;1.95e-20;100!CL:0000738;1.17e-09;136!CL:0002393;6.25e-09;6!CL:0002397;6.25e-09;6!CL:0002087;6.76e-09;104!CL:0000988;1.36e-07;177!CL:0000097;5.34e-07;5!CL:0000235;5.43e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,5.39e-73,72;CL:0000557,1.70e-67,67;CL:0000763,3.03e-67,108;CL:0000049,3.03e-67,108;CL:0000839,1.62e-66,66;CL:0002194,1.84e-63,59;CL:0000576,1.84e-63,59;CL:0000040,1.84e-63,59;CL:0000559,1.84e-63,59;CL:0002009,1.14e-60,61;CL:0000473,2.92e-56,48;CL:0000234,2.92e-56,48;CL:0000860,1.29e-50,42;CL:0002057,1.29e-50,42;CL:0000037,1.13e-43,168;CL:0002032,1.56e-40,161;CL:0000837,1.56e-40,161;CL:0000988,7.61e-40,177;CL:0000738,9.95e-37,136;CL:0002031,2.14e-31,120;CL:0002087,5.90e-31,115;CL:0002393,1.95e-11,9;CL:0002397,1.95e-11,9;CL:0000134,1.22e-09,354;CL:0002320,5.80e-09,361;CL:0000219,2.27e-07,386;CL:0000097,6.14e-07,5;CL:0002028,6.14e-07,5;CL:0000235,6.17e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;1.64e-36;42!CL:0000049;7.29e-18;108 | |||
|ontology_enrichment_disease=DOID:8692!6.20e-09!31;DOID:1240!5.73e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.33e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,5.24e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.66e-33!102;UBERON:0003061!1.66e-33!102;UBERON:0002371!1.27e-31!80;UBERON:0001474!9.87e-30!86;UBERON:0002193!4.35e-29!112;UBERON:0004765!5.75e-26!101;UBERON:0001434!5.75e-26!101;UBERON:0007023!3.69e-22!115;UBERON:0002405!1.11e-21!115;UBERON:0002204!4.09e-13!167;UBERON:0001049!8.95e-12!57;UBERON:0005068!8.95e-12!57;UBERON:0006241!8.95e-12!57;UBERON:0007135!8.95e-12!57;UBERON:0002020!2.80e-11!34;UBERON:0003528!2.80e-11!34;UBERON:0001893!3.13e-11!34;UBERON:0002791!5.38e-11!33;UBERON:0003080!5.87e-11!42;UBERON:0002780!9.42e-11!41;UBERON:0001890!9.42e-11!41;UBERON:0006240!9.42e-11!41;UBERON:0001869!2.41e-10!32;UBERON:0002619!5.79e-10!22;UBERON:0002616!7.21e-10!59;UBERON:0001950!3.09e-09!20;UBERON:0001017!3.88e-09!82;UBERON:0005743!8.95e-09!86;UBERON:0003081!1.27e-08!216;UBERON:0000955!1.40e-08!69;UBERON:0006238!1.40e-08!69;UBERON:0000073!1.53e-08!94;UBERON:0001016!1.53e-08!94;UBERON:0002346!1.59e-08!90;UBERON:0000956!2.82e-08!25;UBERON:0000203!2.82e-08!25;UBERON:0000479!3.09e-08!787;UBERON:0003075!6.97e-08!86;UBERON:0007284!6.97e-08!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;5.07e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.28e-60,76;UBERON:0002390,1.00e-59,98;UBERON:0003061,1.00e-59,98;UBERON:0001474,9.09e-56,82;UBERON:0002193,1.19e-51,108;UBERON:0004765,1.21e-48,90;UBERON:0002405,7.18e-48,93;UBERON:0001434,1.35e-42,100;UBERON:0003081,1.08e-20,203;UBERON:0002204,6.80e-18,167;UBERON:0002384,1.93e-09,371;UBERON:0000926,3.22e-08,315;UBERON:0004120,3.22e-08,315;UBERON:0006603,3.22e-08,315;UBERON:0007023,6.26e-08,114;UBERON:0003528,8.46e-08,34;UBERON:0002020,8.46e-08,34;UBERON:0002619,4.49e-07,22;UBERON:0001893,4.81e-07,34;UBERON:0000923,6.62e-07,560;UBERON:0010316,6.62e-07,560;UBERON:0005291,6.62e-07,560;UBERON:0006598,6.62e-07,560;UBERON:0010317,6.62e-07,560;UBERON:0002532,6.62e-07,560;UBERON:0002791,7.39e-07,32;UBERON:0001049,8.00e-07,56;UBERON:0005068,8.00e-07,56;UBERON:0006241,8.00e-07,56;UBERON:0007135,8.00e-07,56 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,2.53299878168311,0,0.261185628199839,0,0,0,0,0.247532705920093,0,0,0,0,0,0.123121058076788,0,0,0,0,0.125542639594803,0,0,0,1.57345710739562,3.0706351847777,2.78669021968937,0,0,0,0,0.284338464974843,2.34880351467878,12.1878989877013,16.2441002450815,13.6716848550987,4.47830948479849,3.56283032620878,4.63636021741536,7.4153101777578,8.69114670484262,4.36651310138069,18.5943229524548,9.45686142450199,6.50383378879718,10.9323109082417,5.89169625016932,5.20260905754887,13.7898272294647,5.16387746867061,1.35426486594342,10.1650863353007,4.91231070104122,6.51698104890745,14.0798590490615,9.30694178520671,9.59005688698562,7.58657990429447,5.58498241340569,2.55734850319616,14.8006711700578,5.10646702222026,4.9825779919646,10.0499466102697,6.25779502104242,5.2125322729228,10.2917915447673,8.83866326370155,12.3420331101945,4.01385043992689,8.71677629856678,3.14487968262564,2.2465726229299,3.90459921387916,3.05378614724452,2.28010194992999,3.9783335439818,2.19196984517561,0,1.09227722252426,0,0.426730222566507,0.800791974072025,0,0.661044872784862,0,0.569212969109448,0,0,0,3.92355994087075,2.10707267820062,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0.383220493601921,0,0,0.318565414324097,0,0,0.150575119077773,0.127986611154418,1.24930726552346,0.947109008176067,0,0.403213486449465,1.60464117470104,0.434473211648397,0,0.670700859703636,0.383587685530591,0,0,0,0,0,0.283604451492204,0,0.175669571386252,0.523916301990851,0,0,2.92092654289215,2.61194605948901,2.39324328933957,1.90792499444274,1.14398982156026,0.74291500265913,0.198762407366705,0.860234595106124,0,0.56530794192401,0.419499436209906,0,0.417989933073621,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,1.49091585508596,0,0.132409180813219,0,0,0,0,0,0.622422070799533,0.269421344139376,0.163461903113459,0,0,0,0,0,0.298897361103602,0,0.323745888736263,0.140450806702248,0,0,0.103325781175765,0,0.989067717114227,0,0,0,0.375355559615893,0,0.438977620880838,0.30648779579902,0.751190294532984,0,0.717558542755448,0,0,0,0,0,0.18611685633159,0,0,0,0.184099797284599,0,0,0.10075209822764,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0.463721619900307,0.117408694235822,0,0,0.380508304469197,0,0,3.69325509131096,2.10603838625314,2.37809859661965,0,0,0,0,0,0,15.7652236126702,1.23267807618516,6.84182781284548,5.33243827642757,6.05963680446624,0.380987365753014,0.763976851116555,4.68869788840188,0,0.308482478109971,0.300343057843917,0.857479297891735,0.112131084345361,0,0.1466765716419,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0.099972991182057,3.64871341923571,1.50677127429638,4.21667878966063,0.479249710983165,0,0,0.144781306667579,0.205476322550383,0,0.112085143993527,0.788123040807709,1.50939302401662,1.41177339907723,0,0,0.773288812777695,0.502548796003046,0.637938751653163,5.24304916763028,8.97484377612075,2.48649308061621,0,0,0.271265023699736,0.207970861530807,0,0,0,0.601892199455438,2.27407504055985,1.03473071292505,0,0.184369168541703,0.260650843404249,0,0,2.68798433959754,5.1771408196468,3.30855429190677,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0.219259876645935,0.522870902049801,0.256450125116389,0,0,0.824328093181778,0.457847324091717,0.41254749960294,0,0,0,0,0.462145851343933,0.307007349452259,0.137836572484531,0.322260734604821,0.290033387828457,0.0852266274161009,0.178064071293475,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0.286249773483982,0.372158369359667,0.632758849437452,0.38126038784765,0,0,0.636406495851874,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0.438450885253763,0,0,0,0.30982349809975,0,0,0,0,0,1.05553817648832,0,0,0,0,0,0,1.60044461320525,0,0,0,0,2.53723804616085,3.0585488285695,1.13929437434833,0.714695326373367,1.23408681925858,0,2.70015718619057,0,0,0,0,0,0.721346064882224,0,0,0.798317485731266,0.383010740264733,0.211673582723883,2.59697552219644,0.842391534340376,1.36940807419915,0.783399478865116,0,0.169291777801603,1.605880751037,3.02699560786571,2.98092366383228,2.74804275804612,2.15068535015921,3.57881772627865,3.50383197595008,1.9538809540204,0,1.23087398947712,0.811367035427949,1.99843180798692,0,0,1.02555725490326,0.728163130497081,0.111443384277478,0,0,0,0,0.994147647766298,1.40669416410513,0,0,0,0.19924798825107,0.828851746593443,0,0.306806047506464,0,0.311039587661807,0,0,2.04628948090749,0.591860433821602,4.7896618469388,1.11136990144637,0.969332746095218,1.48428957058962,7.98455192004777,0,0,0.724999575434793,0,0,0,0,0.874813840149763,0.868124974666461,0.885741385813839,0.60298219312704,0,0.221158519862449,0,1.75508317723178,0,0,1.00035336054936,0,0,0,0,0.31900115973192,0.0915975934018623,0,0,0.470940769185074,1.49590513710141,1.80476528493745,1.37243774022418,1.67821586975843,2.84630599086278,2.54298526368606,0,0,0,0.216388639742091,0,1.1499483385434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| |||
|short_description=p12@ZEB2 | |||
}} |
Revision as of 05:47, 21 January 2014
Short description: | p12@ZEB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_ZEB2_5end |
Coexpression cluster: | C2325_CD14_Mast_Basophils_CD14CD16_Peripheral_occipital_Natural |
Association with transcript: | -20bp_to_ENST00000558170_5end |
EntrezGene: | ZEB2 |
HGNC: | 14881 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 5.39e-73 | 72 |
granulocyte monocyte progenitor cell | 1.70e-67 | 67 |
myeloid cell | 3.03e-67 | 108 |
common myeloid progenitor | 3.03e-67 | 108 |
myeloid lineage restricted progenitor cell | 1.62e-66 | 66 |
monopoietic cell | 1.84e-63 | 59 |
monocyte | 1.84e-63 | 59 |
monoblast | 1.84e-63 | 59 |
promonocyte | 1.84e-63 | 59 |
macrophage dendritic cell progenitor | 1.14e-60 | 61 |
defensive cell | 2.92e-56 | 48 |
phagocyte | 2.92e-56 | 48 |
classical monocyte | 1.29e-50 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.29e-50 | 42 |
hematopoietic stem cell | 1.13e-43 | 168 |
hematopoietic oligopotent progenitor cell | 1.56e-40 | 161 |
hematopoietic multipotent progenitor cell | 1.56e-40 | 161 |
hematopoietic cell | 7.61e-40 | 177 |
leukocyte | 9.95e-37 | 136 |
hematopoietic lineage restricted progenitor cell | 2.14e-31 | 120 |
nongranular leukocyte | 5.90e-31 | 115 |
intermediate monocyte | 1.95e-11 | 9 |
CD14-positive, CD16-positive monocyte | 1.95e-11 | 9 |
mesenchymal cell | 1.22e-09 | 354 |
connective tissue cell | 5.80e-09 | 361 |
motile cell | 2.27e-07 | 386 |
mast cell | 6.14e-07 | 5 |
basophil mast progenitor cell | 6.14e-07 | 5 |
macrophage | 6.17e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.28e-60 | 76 |
hematopoietic system | 1.00e-59 | 98 |
blood island | 1.00e-59 | 98 |
bone element | 9.09e-56 | 82 |
hemolymphoid system | 1.19e-51 | 108 |
skeletal element | 1.21e-48 | 90 |
immune system | 7.18e-48 | 93 |
skeletal system | 1.35e-42 | 100 |
lateral plate mesoderm | 1.08e-20 | 203 |
musculoskeletal system | 6.80e-18 | 167 |
connective tissue | 1.93e-09 | 371 |
mesoderm | 3.22e-08 | 315 |
mesoderm-derived structure | 3.22e-08 | 315 |
presumptive mesoderm | 3.22e-08 | 315 |
adult organism | 6.26e-08 | 114 |
brain grey matter | 8.46e-08 | 34 |
gray matter | 8.46e-08 | 34 |
regional part of cerebral cortex | 4.49e-07 | 22 |
telencephalon | 4.81e-07 | 34 |
germ layer | 6.62e-07 | 560 |
germ layer / neural crest | 6.62e-07 | 560 |
embryonic tissue | 6.62e-07 | 560 |
presumptive structure | 6.62e-07 | 560 |
germ layer / neural crest derived structure | 6.62e-07 | 560 |
epiblast (generic) | 6.62e-07 | 560 |
regional part of telencephalon | 7.39e-07 | 32 |
neural tube | 8.00e-07 | 56 |
neural rod | 8.00e-07 | 56 |
future spinal cord | 8.00e-07 | 56 |
neural keel | 8.00e-07 | 56 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 5.24e-08 | 31 |