FFCP PHASE1:Hg19::chr2:131129793..131129812,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26469 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9649 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=151bp_to_uc002tre.2_5end | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_1_at_PTPN18_5end | |||
|id=chr2:131129793..131129812,+ | |||
|ontology_enrichment_celltype=CL:0000037!4.08e-50!172;CL:0000566!4.08e-50!172;CL:0000988!9.56e-49!182;CL:0002032!2.66e-47!165;CL:0000837!2.66e-47!165;CL:0000738!8.68e-47!140;CL:0002087!9.93e-45!119;CL:0002031!4.17e-42!124;CL:0000763!3.32e-23!112;CL:0000049!3.32e-23!112;CL:0000542!3.98e-23!53;CL:0000051!3.98e-23!53;CL:0000838!6.56e-23!52;CL:0000766!7.76e-23!76;CL:0000557!3.57e-21!71;CL:0002320!5.22e-21!365;CL:0000134!1.81e-20!358;CL:0000839!3.32e-19!70;CL:0002194!4.39e-19!63;CL:0000576!4.39e-19!63;CL:0000040!4.39e-19!63;CL:0000559!4.39e-19!63;CL:0002009!1.11e-18!65;CL:0000048!8.06e-17!430;CL:0002057!1.08e-15!42;CL:0000219!2.84e-15!390;CL:0000723!3.01e-15!436;CL:0000034!9.88e-14!444;CL:0000860!4.35e-13!45;CL:0000945!1.12e-11!24;CL:0000826!1.12e-11!24;CL:0000084!8.57e-11!25;CL:0000827!8.57e-11!25;CL:0002371!5.93e-10!591;CL:0000791!1.49e-09!18;CL:0000789!1.49e-09!18;CL:0002420!1.49e-09!18;CL:0002419!1.49e-09!18;CL:0000790!1.49e-09!18;CL:0000236!3.96e-08!14;CL:0000625!5.89e-07!11;CL:0002393!9.47e-07!9;CL:0002397!9.47e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.15e-13;53!CL:0002087;7.31e-13;104!CL:0000576;2.62e-12;48!CL:0000766;5.84e-12;69!CL:0000945;1.12e-11;24!CL:0000738;4.12e-11;136!CL:0000084;8.30e-11;25!CL:0000473;9.59e-11;39!CL:0000234;9.59e-11;39!CL:0000860;7.19e-10;33!CL:0002057;7.19e-10;33!CL:0000791;1.47e-09;18!CL:0000789;1.47e-09;18!CL:0002419;1.47e-09;18!CL:0000763;1.92e-09;100!CL:0000988;5.72e-09;177!CL:0000236;8.65e-08;13!CL:0000625;5.84e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.92e-53,168;CL:0000988,1.60e-51,177;CL:0002032,1.35e-50,161;CL:0000837,1.35e-50,161;CL:0000738,1.92e-50,136;CL:0002087,1.06e-48,115;CL:0002031,8.24e-46,120;CL:0000766,2.84e-26,72;CL:0000763,7.15e-26,108;CL:0000049,7.15e-26,108;CL:0000557,1.35e-24,67;CL:0000542,3.98e-23,53;CL:0000051,3.98e-23,53;CL:0000838,6.56e-23,52;CL:0002194,1.50e-22,59;CL:0000576,1.50e-22,59;CL:0000040,1.50e-22,59;CL:0000559,1.50e-22,59;CL:0000839,1.95e-22,66;CL:0002009,5.10e-22,61;CL:0002320,9.18e-22,361;CL:0000134,3.21e-21,354;CL:0000473,2.17e-18,48;CL:0000234,2.17e-18,48;CL:0000048,3.33e-17,427;CL:0000219,7.05e-16,386;CL:0000860,1.08e-15,42;CL:0002057,1.08e-15,42;CL:0000723,1.31e-15,433;CL:0000034,4.54e-14,441;CL:0000945,1.12e-11,24;CL:0000826,1.12e-11,24;CL:0000084,8.57e-11,25;CL:0000827,8.57e-11,25;CL:0000791,1.49e-09,18;CL:0000789,1.49e-09,18;CL:0002420,1.49e-09,18;CL:0002419,1.49e-09,18;CL:0000790,1.49e-09,18;CL:0000236,3.96e-08,14;CL:0000625,5.89e-07,11;CL:0002393,9.47e-07,9;CL:0002397,9.47e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000051;1.15e-13;53!CL:0002057;1.04e-11;42!CL:0000790;1.47e-09;18!CL:0000049;1.80e-08;108 | |||
|ontology_enrichment_disease=DOID:2531!1.36e-09!51;DOID:0060083!1.36e-09!51;DOID:1240!1.45e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.36e-09,51;DOID:0060083,1.36e-09,51;DOID:1240,1.45e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002193!1.24e-31!112;UBERON:0002390!9.37e-30!102;UBERON:0003061!9.37e-30!102;UBERON:0003081!6.95e-23!216;UBERON:0002371!1.40e-21!80;UBERON:0002384!7.88e-19!375;UBERON:0001474!5.54e-18!86;UBERON:0002405!2.66e-16!115;UBERON:0004765!5.92e-15!101;UBERON:0001434!5.92e-15!101;UBERON:0002204!1.07e-09!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0002193;4.55e-08;42!UBERON:0002390;4.97e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,6.54e-35,108;UBERON:0002390,4.15e-33,98;UBERON:0003061,4.15e-33,98;UBERON:0002405,4.63e-29,93;UBERON:0002371,9.10e-25,76;UBERON:0003081,2.16e-24,203;UBERON:0001474,1.16e-20,82;UBERON:0002384,1.56e-19,371;UBERON:0004765,9.22e-19,90;UBERON:0001434,7.82e-17,100;UBERON:0002204,1.38e-10,167;UBERON:0000926,3.79e-10,315;UBERON:0004120,3.79e-10,315;UBERON:0006603,3.79e-10,315 | |||
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| |||
|short_description=p1@PTPN18 | |||
}} |
Revision as of 05:24, 21 January 2014
Short description: | p1@PTPN18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PTPN18_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | 151bp_to_uc002tre.2_5end |
EntrezGene: | PTPN18 |
HGNC: | 9649 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 6.54e-35 | 108 |
hematopoietic system | 4.15e-33 | 98 |
blood island | 4.15e-33 | 98 |
immune system | 4.63e-29 | 93 |
bone marrow | 9.10e-25 | 76 |
lateral plate mesoderm | 2.16e-24 | 203 |
bone element | 1.16e-20 | 82 |
connective tissue | 1.56e-19 | 371 |
skeletal element | 9.22e-19 | 90 |
skeletal system | 7.82e-17 | 100 |
musculoskeletal system | 1.38e-10 | 167 |
mesoderm | 3.79e-10 | 315 |
mesoderm-derived structure | 3.79e-10 | 315 |
presumptive mesoderm | 3.79e-10 | 315 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.36e-09 | 51 |
immune system cancer | 1.36e-09 | 51 |
leukemia | 1.45e-07 | 39 |