FFCP PHASE1:Hg19::chr2:113875434..113875448,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3557 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6000 | |||
|TSSclassifier=strong | |||
|UniProt=P18510,Q53SC2 | |||
|association_with_transcript=-21bp_to_ENST00000361779,NM_000577,NM_173841,NM_173843,uc002tiy.2,uc002tiz.2,uc002tja.2_5end | |||
|description=CAGE_peak_4_at_IL1RN_5end | |||
|id=chr2:113875434..113875448,+ | |||
|ontology_enrichment_celltype=CL:0002076!2.31e-09!43;CL:0002368!1.25e-08!13;CL:0002159!8.81e-08!13;CL:0002274!4.20e-07!5;CL:0000457!4.20e-07!5;CL:0002191!4.20e-07!5;CL:0000097!4.20e-07!5;CL:0000831!4.20e-07!5;CL:0002028!4.20e-07!5;CL:0000990!7.98e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000097;7.08e-13;5!CL:0002368;3.87e-12;13!CL:0002159;6.16e-12;14!CL:0002076;4.47e-10;42!CL:0000244;2.39e-09;4!CL:0000731;2.39e-09;4!CL:0002202;1.43e-08;9!CL:0002632;1.43e-08;9!CL:0002621;5.28e-08;3!CL:0000307;7.60e-08;3!CL:0000622;3.85e-07;5!CL:0002328;4.03e-07;3!CL:0000163;7.06e-07;9!CL:0000840;8.77e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,7.11e-13,5;CL:0002028,7.11e-13,5;CL:0002076,2.51e-12,42;CL:0002368,2.89e-12,13;CL:0002159,5.59e-12,14;CL:0000244,2.45e-09,4;CL:0000731,2.45e-09,4;CL:0000557,6.89e-09,67;CL:0000223,1.12e-08,58;CL:0002202,1.16e-08,9;CL:0002632,1.16e-08,9;CL:0000839,5.27e-08,66;CL:0002621,5.54e-08,3;CL:0000068,6.80e-08,3;CL:0000069,6.80e-08,3;CL:0000307,6.80e-08,3;CL:0000377,6.80e-08,3;CL:0000622,3.08e-07,5;CL:0002328,3.26e-07,3;CL:0000066,5.09e-07,253;CL:0000766,5.97e-07,72;CL:0000163,7.08e-07,9;CL:0000840,8.66e-07,5;CL:0001029,8.66e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000377;7.60e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007196!5.36e-07!14;UBERON:0001558!5.36e-07!14;UBERON:0003126!9.06e-07!7;UBERON:0001005!9.06e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000486;1.34e-08;12!UBERON:0001949;5.28e-08;3!UBERON:0000365;1.86e-07;5!UBERON:0004815;4.03e-07;3!UBERON:0002031;4.03e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,5.54e-08,3;UBERON:0000365,1.89e-07,5;UBERON:0002371,3.03e-07,76;UBERON:0004815,3.26e-07,3;UBERON:0002031,3.26e-07,3;UBERON:0004765,5.77e-07,90 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0.245733936501509,0.697801167972428,1.09220686065086,0.263766978228454,0,0,0,0,0,0,1.23121058076788,0.816002764977012,0.313454721478088,0,0.136874425072884,0,0,0,0,0,0,0,2.75826367343678,4.819294700452,2.58827807116751,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0.47296445977717,4.82643953031266,1.93645405075148,2.70852973188684,0,0,0,1.22433556948361,1.28371610830437,1.91801137739712,0,0,0,0.290209238628584,1.13477044938228,0.622822248995575,0,0,0,0,1.10483290796269,2.21523671208619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.665188192387692,0.087834785693126,0.130979075497713,5.82872461268068,7.04490441290416,4.21911611751088,7.48757870386849,11.5673425651413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.48875241714027,0,0.12663051166458,0.132409180813219,0,0.354668382198357,0,0,0,0,0,0,0.302714855289863,0,0,0,0,0,0.117434498643765,0,0,0,0,0.103325781175765,0,0,0,0,1.68336113954066,0.875829639103749,0,0,0,0,0,0,0.427114777637135,0.211931901159562,0,0.206105058476878,0,0,0,0,0,0.0920498986422993,0,0,0,0,5.41130388857231,8.45512973831587,5.44928731239107,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,2.96325770603289,2.24803506515239,5.02644862058154,2.87024179991442,0.651616610620649,0,0,0,0,0,0,0,0,0,0.738651018262192,13.5722473780758,7.28292695214768,0.93733833986777,9.40699917913613,11.4837828766333,0,0.290633938513962,2.30029607499127,13.3019074231905,11.2701995536929,18.4522022831287,7.92659743793288,11.4880614418006,0.063497894292169,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0.099972991182057,0,0.502257091432126,2.10833939483032,0,0,0,0,0.205476322550383,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781952530212746,0,0,0,0,0.106727557803444,0.606255142892519,0,0.30239029332968,0,0,0,0.256278298511402,0,0,1.48418066444991,0.154209693802656,1.77561725313127,1.23190734020714,1.55776328755086,0.116210378459959,0,1.20303882181971,4.14364450211533,0.114814448164607,0,0,4.06079651616671,0.616122696835318,0,0,0,0,0,0,0,0,0,0.254876273045038,0.831076008928724,0,0.438519753291869,0,0,0,0,0,0,0,4.01985876597321,3.90036147621913,0,0.096670718292122,0,0,0.137836572484531,0,0,0.0852266274161009,0,3.63626813794152,1.92190067365106,0.893288987462089,2.12431339796655,0.929691098594572,0,0.6970372701606,0,0.532306030317022,1.73986598415015,0,0,0,0,0,0,0,2.22742273548156,0,0,0,0,0.404364963146632,0,0,0,1.21856744815642,0,0,0,0,1.10273068709225,0,0,0.578775534266688,0.655894752046633,0,0.6196469961995,0.281695602532241,0,0.0982490410131212,0,0,0,0,3.03578539012572,0.699869440489966,3.84888450902048,6.03272047982209,8.71127878890581,0,2.58303223602738,3.36942951335251,8.42517291719684,3.67557440331135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399158742865633,0,2.96343015813436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,1.12284324244932,0.146508179271894,0,0,0,0.95497793895076,0.296964680832639,3.68592842519078,0,0,1.00177834520615,0,0,0.19924798825107,0,0,0,0,0,2.78591888556713,0.716084698702437,0,0.0986434056369336,0,0,0,0,0,0.520855522170466,0.0874599999961957,0,0.568967241427498,0,0,0,0,0,0,0,0,0,0,0,0,4.1827123283581,0.923403102045565,2.16489906109302,0,0,0,0,0,0,0,2.82564461511045,0.166211681900156,0,0,0,0.189753732724185,0.476809736941136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,4.01768829398948,1.39294730528644,0.17472666824203,0,0,0.0730893170861856,0,5.62536295632833,0,0.677942222341597,0,0.19871461170299,0,0.195551382734803,1.52301758477914,0.85381197895741,0,0.144090417154106,0,0,0,0,3.29971648463514,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.22392955361152,0.77380195455795,0.182248669974074,1.0063040627978,0.0788057072991982,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0.574647645245373,0,0.113312091520126,0,0,0,0,0,0.704815022316672,0.106787412567695,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,3.58211526928498,2.80455971816669,0.554805861502613,0.189403005275089,0,0,0.228840068396924,0.604923695052956,2.33155800874171,6.35777144955426,0.159296767163702,0.899606224327209,0.310525913752519,0,0,0,0.300515217994437,0,0,2.18218391043071,0.214821114084977,4.64033759878494,0,0,0.343395705182793,0.673498977531838,0,0,0,0,0.226705925512272,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0.194860308839388,1.32864840313363,0.654261577023377,0,0,0.422624246717254,0,0,0,0,9.38940346284388,5.59518030877778,4.35454082023081,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0.0691572524642179,0,0,0.687034029507179,0.471878893390961,0.550285795565037,0.115525666150338,0,0,0,0.0752103283492573,0.40341013740704,0,0,0,1.18284868973636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,3.72989095493466,1.7071847709395,0,0,0,0,0.846774100381858,0,0,0,0,0,0.853425474875886,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0.490296643507811,0,0,0,0,0,0,0,0,1.07132363163395,2.11736923029415,0,0.730336388246517,0,0,0,0,0,0,1.48798007266701,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,0,0,0.0620747142958579,0,0.190941474834495,0.202117188958219,3.04803447055746,2.05339980651169,4.57993960499195,0.932388670104793,0.332660356546013,0.407016343054873,0,0,0,0,0,0.813792356631477,0,0,0 | |||
|short_description=p4@IL1RN | |||
}} |
Revision as of 05:03, 21 January 2014
Short description: | p4@IL1RN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_IL1RN_5end |
Coexpression cluster: | NA |
Association with transcript: | -21bp_to_ENST00000361779, NM_000577, NM_173841, NM_173843, uc002tiy.2, uc002tiz.2, uc002tja.2_5end |
EntrezGene: | IL1RN |
HGNC: | 6000 |
UniProt: | P18510Q53SC2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 7.11e-13 | 5 |
basophil mast progenitor cell | 7.11e-13 | 5 |
endo-epithelial cell | 2.51e-12 | 42 |
respiratory epithelial cell | 2.89e-12 | 13 |
general ecto-epithelial cell | 5.59e-12 | 14 |
transitional epithelial cell | 2.45e-09 | 4 |
urothelial cell | 2.45e-09 | 4 |
granulocyte monocyte progenitor cell | 6.89e-09 | 67 |
endodermal cell | 1.12e-08 | 58 |
epithelial cell of tracheobronchial tree | 1.16e-08 | 9 |
epithelial cell of lower respiratory tract | 1.16e-08 | 9 |
myeloid lineage restricted progenitor cell | 5.27e-08 | 66 |
gingival epithelial cell | 5.54e-08 | 3 |
duct epithelial cell | 6.80e-08 | 3 |
branched duct epithelial cell | 6.80e-08 | 3 |
tracheal epithelial cell | 6.80e-08 | 3 |
tracheoblast | 6.80e-08 | 3 |
acinar cell | 3.08e-07 | 5 |
bronchial epithelial cell | 3.26e-07 | 3 |
epithelial cell | 5.09e-07 | 253 |
myeloid leukocyte | 5.97e-07 | 72 |
endocrine cell | 7.08e-07 | 9 |
immature conventional dendritic cell | 8.66e-07 | 5 |
common dendritic progenitor | 8.66e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 5.54e-08 | 3 |
urothelium | 1.89e-07 | 5 |
bone marrow | 3.03e-07 | 76 |
lower respiratory tract epithelium | 3.26e-07 | 3 |
epithelium of bronchus | 3.26e-07 | 3 |
skeletal element | 5.77e-07 | 90 |