FFCP PHASE1:Hg19::chr2:60780730..60780742,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=53335 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13221 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-28bp_to_ENST00000359629_5end | |||
|description=CAGE_peak_5_at_BCL11A_5end | |||
|id=chr2:60780730..60780742,- | |||
|ontology_enrichment_celltype=CL:0000037!2.53e-08!172;CL:0000566!2.53e-08!172;CL:0000236!2.74e-08!14;CL:0000988!3.02e-08!182;CL:0000945!2.37e-07!24;CL:0000826!2.37e-07!24;CL:0000763!7.28e-07!112;CL:0000049!7.28e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000945;8.49e-12;24!CL:0000236;1.62e-10;13!CL:0000540;5.21e-08;6!CL:0000404;5.21e-08;6!CL:0000784;5.04e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,5.73e-12,24;CL:0000826,5.73e-12,24;CL:0000236,1.03e-09,14;CL:0000540,3.77e-08,6;CL:0000031,3.77e-08,6;CL:0000404,3.77e-08,6;CL:0000784,5.26e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000031;5.21e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!1.46e-15!32;UBERON:0007023!2.16e-15!115;UBERON:0002020!5.90e-15!34;UBERON:0003528!5.90e-15!34;UBERON:0002619!1.14e-14!22;UBERON:0000956!1.30e-14!25;UBERON:0000203!1.30e-14!25;UBERON:0001893!1.47e-14!34;UBERON:0002791!4.68e-14!33;UBERON:0000073!6.91e-14!94;UBERON:0001016!6.91e-14!94;UBERON:0001017!2.11e-13!82;UBERON:0005743!2.65e-13!86;UBERON:0001950!2.84e-13!20;UBERON:0002780!4.98e-12!41;UBERON:0001890!4.98e-12!41;UBERON:0006240!4.98e-12!41;UBERON:0001049!7.00e-12!57;UBERON:0005068!7.00e-12!57;UBERON:0006241!7.00e-12!57;UBERON:0007135!7.00e-12!57;UBERON:0003080!2.05e-11!42;UBERON:0002616!2.69e-11!59;UBERON:0003075!1.21e-10!86;UBERON:0007284!1.21e-10!86;UBERON:0000955!1.52e-10!69;UBERON:0006238!1.52e-10!69;UBERON:0003056!1.85e-10!61;UBERON:0004121!3.82e-10!169;UBERON:0002346!4.60e-10!90;UBERON:0000924!7.97e-10!173;UBERON:0006601!7.97e-10!173;UBERON:0000153!2.62e-09!129;UBERON:0007811!2.62e-09!129;UBERON:0000033!1.39e-08!123;UBERON:0000178!5.57e-07!15;UBERON:0000179!5.57e-07!15;UBERON:0000463!5.57e-07!15;UBERON:0001871!8.70e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.23e-26;22!UBERON:0001950;1.68e-23;20!UBERON:0000956;1.34e-22;25!UBERON:0000203;1.34e-22;25!UBERON:0001869;1.47e-18;32!UBERON:0002791;4.68e-17;32!UBERON:0001893;1.67e-16;34!UBERON:0003528;5.10e-15;34!UBERON:0002020;5.10e-15;34!UBERON:0002780;4.21e-12;41!UBERON:0001890;4.21e-12;41!UBERON:0001871;2.27e-11;6!UBERON:0000200;6.85e-10;6!UBERON:0002021;2.03e-09;5!UBERON:0000073;9.26e-07;53!UBERON:0002616;9.26e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,5.79e-27,22;UBERON:0001950,6.77e-24,20;UBERON:0000956,4.16e-23,25;UBERON:0000203,4.16e-23,25;UBERON:0001869,9.14e-21,32;UBERON:0001893,3.48e-19,34;UBERON:0002791,6.40e-19,32;UBERON:0003528,1.82e-17,34;UBERON:0002020,1.82e-17,34;UBERON:0001016,1.19e-16,89;UBERON:0002780,2.92e-16,41;UBERON:0001890,2.92e-16,41;UBERON:0003080,2.92e-16,41;UBERON:0006240,2.92e-16,41;UBERON:0001017,6.36e-14,81;UBERON:0007023,5.43e-13,114;UBERON:0000073,3.18e-12,53;UBERON:0002616,3.18e-12,53;UBERON:0003056,5.87e-12,61;UBERON:0001871,1.46e-11,6;UBERON:0001049,3.17e-11,56;UBERON:0005068,3.17e-11,56;UBERON:0006241,3.17e-11,56;UBERON:0007135,3.17e-11,56;UBERON:0000955,9.36e-11,68;UBERON:0006238,9.36e-11,68;UBERON:0000200,2.70e-10,6;UBERON:0002021,1.17e-09,5;UBERON:0003075,7.10e-08,82;UBERON:0007284,7.10e-08,82;UBERON:0011216,2.70e-07,223;UBERON:0002346,3.31e-07,86 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0.245733936501509,0,0.218441372130172,0.263766978228454,0,0.331397375727916,0,0,0,0,0.492484232307152,0,0.313454721478088,0.572471974262113,0.273748850145768,0.125542639594803,0,0,0,0,0.383829398097213,1.39334510984468,0,0.30120591877825,0.369754010166788,1.78174561334694,2.13253848731132,0.880801318004542,2.21598163412751,1.00272223735071,1.95309783644267,0,0.32389366601898,0.257575567634187,0.290796477559129,0,0.242584061187816,0,0.822335776043652,0.309706370895104,0.28769239232215,0.512321413058201,0,0,1.93645405075148,0,0.188242339542605,0.272906150057846,0.449446968890169,0.612167784741805,0.320929027076094,0,1.31940520074686,0.199463657621632,0.852449501065388,0.580418477257168,0,0.622822248995575,0,1.0429658368404,1.95469960234605,0.605399502633369,0,0.316462387440884,0,0.425208599930087,1.67726916406701,0.561643155732475,0.150176892841506,1.6072558669708,0,0.59675003159727,0.91332076882317,1.75996244461323,2.18455444504853,0.889509253863555,0.853460445133014,2.00197993518006,0.574752439954483,0.661044872784862,2.86216126360609,11.384259382189,7.6340834618222,10.7036503875064,1.32171328579026,0,3.16060901730092,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0.472674085820339,0.443458794925128,0.351339142772504,0.0654895377488563,0.364295288292542,0,0,0.174129737299267,0,16.6943437013739,7.43593384014166,4.45749001595478,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0.23486899728753,0.161872944368132,0.98315564691574,0,0,0,0,0,0,0,0.168336113954066,0,0,0.438977620880838,0,0,0.113432183160021,0.179389635688862,0.213557388818567,0,0.300091096084402,0.103052529238439,0,0,0.506328996723799,0.292311015483596,0.252433774244115,0.184099797284599,0.161646056818812,0.355009592516614,0.10075209822764,0.339121184620975,0,0.272746120590835,0.573609190778008,0.121973706129595,0.265059536642971,0.232387885739037,0.207322110030741,0.252320850875628,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0.441463099414651,0.245976877086227,0.343135620597051,0.219500570817251,0,0,0.370353780634118,0,0,1.44331342025273,0.115930404975077,0.70445216541493,0,0,0.190254152234598,0,0,0.492434012174795,0.234004265139238,0,0,0.16798212819886,0,0.179117045405697,0,0,0,0,0.207328115540772,2.45003920808834,0.75745460055828,0.380987365753014,0,0,0,0,0,0,0.560655421726804,0,0.2933531432838,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.18631050222156,2.17771144934653,8.29320377149112,0,0,0,0.12269149171914,0,0.271265023699736,0.207970861530807,0,0,0,0.300946099727719,0,1.03473071292505,0,0.184369168541703,0,0.587403472388222,0.343143423810856,0.206768026122887,0.862856803274467,0.853820462427555,0.303127571446259,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0.601519410909855,0.276242966807689,0,0,0,0,0.0770153371044148,0,0,0.211103257785751,0,0,0.647747748306418,0,0,0,0,0,0.447749509444357,1.53481913652154,1.5686127061494,0,0.328014645699706,0.325378394664303,0,0.183138929636687,0,0,0.650060246036521,0,0,0,0,0.137836572484531,0.214840489736547,0,0,0.0890320356467374,0,0.576570202095319,0.127612712494584,0,0,0,0,0,0.532306030317022,0,0.18532421910392,0,0.372158369359667,0.949138274156178,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.563391205064483,0,0,0,0,0.211107635297664,0,0,0,0.288666338176536,0,1.08890984861323,0.0941438007767792,0,1.68471475667626,0.443430153536676,0.229723400206959,0.507447609232169,2.29391162142713,0.569647187174163,0.238231775457789,1.64544909234478,0.648473311192717,2.16012574895246,1.58625035258854,0,0,0.245040215981032,4.64507937814297,2.8853842595289,0.640276590135727,0,0.997896857164083,0.383010740264733,0.635020748171649,1.29848776109822,1.68478306868075,0.912938716132769,0.313359791546046,20.0507581672054,1.18504244461122,1.2847046008296,1.21079824314629,1.27753871307098,0.343505344755765,0.614481528616916,0.447352215784832,1.16794399198336,2.9308214310306,0,0,0.540911356951966,0.33307196799782,2.81974010175699,0,0,0.36408156524854,0,0.284136146806413,0,0.593929361665277,0.307160702099232,2.98244294329889,1.40669416410513,0,0,0,0,4.69682656402951,0,0.20453736500431,1.6001024709939,0,0,0,0.511572370226872,0.394573622547734,2.3948309234694,0,0.969332746095218,1.57705766875147,1.99613798001194,0,0,0,1.137934482855,0,0,0.689486746482929,0,1.04174996959975,2.65722415744152,0.361789315876224,0,0.110579259931225,0.295547618953547,1.53569778007781,0,0.139423744278603,0.307801034015188,0,0,0,0,0,0,0,0,1.8837630767403,0,0,0,0,0,0.635746315921515,0,0,0,0.865554558968364,0.995261931078505,0.884575645033392,6.72133159426988,0.593042257361244,0.86494757262552,0.313265848516366,0,0,0.234264445725339,2.37191225980366,0,0,0,1.20990716048664,3.97894590119637,0.126373159256976,0.1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| |||
|short_description=p5@BCL11A | |||
}} |
Revision as of 03:22, 21 January 2014
Short description: | p5@BCL11A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_BCL11A_5end |
Coexpression cluster: | NA |
Association with transcript: | -28bp_to_ENST00000359629_5end |
EntrezGene: | BCL11A |
HGNC: | 13221 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 5.73e-12 | 24 |
pro-B cell | 5.73e-12 | 24 |
B cell | 1.03e-09 | 14 |
neuron | 3.77e-08 | 6 |
neuroblast | 3.77e-08 | 6 |
electrically signaling cell | 3.77e-08 | 6 |
plasmacytoid dendritic cell | 5.26e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 5.79e-27 | 22 |
neocortex | 6.77e-24 | 20 |
cerebral cortex | 4.16e-23 | 25 |
pallium | 4.16e-23 | 25 |
cerebral hemisphere | 9.14e-21 | 32 |
telencephalon | 3.48e-19 | 34 |
regional part of telencephalon | 6.40e-19 | 32 |
brain grey matter | 1.82e-17 | 34 |
gray matter | 1.82e-17 | 34 |
nervous system | 1.19e-16 | 89 |
regional part of forebrain | 2.92e-16 | 41 |
forebrain | 2.92e-16 | 41 |
anterior neural tube | 2.92e-16 | 41 |
future forebrain | 2.92e-16 | 41 |
central nervous system | 6.36e-14 | 81 |
adult organism | 5.43e-13 | 114 |
regional part of nervous system | 3.18e-12 | 53 |
regional part of brain | 3.18e-12 | 53 |
pre-chordal neural plate | 5.87e-12 | 61 |
temporal lobe | 1.46e-11 | 6 |
neural tube | 3.17e-11 | 56 |
neural rod | 3.17e-11 | 56 |
future spinal cord | 3.17e-11 | 56 |
neural keel | 3.17e-11 | 56 |
brain | 9.36e-11 | 68 |
future brain | 9.36e-11 | 68 |
gyrus | 2.70e-10 | 6 |
occipital lobe | 1.17e-09 | 5 |
neural plate | 7.10e-08 | 82 |
presumptive neural plate | 7.10e-08 | 82 |
organ system subdivision | 2.70e-07 | 223 |
neurectoderm | 3.31e-07 | 86 |