FFCP PHASE1:Hg19::chr2:55201868..55201901,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=57142 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=14085 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=59bp_to_AK090714_5end | |||
|description=CAGE_peak_13_at_RTN4_5end | |||
|id=chr2:55201868..55201901,- | |||
|ontology_enrichment_celltype=CL:0000055!2.00e-10!180;CL:0000057!4.17e-10!75 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.53e-08,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!4.97e-09!659;UBERON:0002020!5.57e-09!34;UBERON:0003528!5.57e-09!34;UBERON:0001049!3.67e-08!57;UBERON:0005068!3.67e-08!57;UBERON:0006241!3.67e-08!57;UBERON:0007135!3.67e-08!57;UBERON:0002791!6.42e-08!33;UBERON:0000467!6.72e-08!625;UBERON:0001893!8.68e-08!34;UBERON:0002616!8.98e-08!59;UBERON:0001869!9.12e-08!32;UBERON:0000480!1.12e-07!626;UBERON:0003080!1.71e-07!42;UBERON:0002780!4.28e-07!41;UBERON:0001890!4.28e-07!41;UBERON:0006240!4.28e-07!41;UBERON:0000956!7.35e-07!25;UBERON:0000203!7.35e-07!25;UBERON:0001017!9.90e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0002791;2.77e-07;32!UBERON:0003528;3.16e-07;34!UBERON:0002020;3.16e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,8.37e-09,34;UBERON:0002020,8.37e-09,34;UBERON:0002791,8.31e-08,32;UBERON:0002780,1.57e-07,41;UBERON:0001890,1.57e-07,41;UBERON:0003080,1.57e-07,41;UBERON:0006240,1.57e-07,41;UBERON:0000073,2.78e-07,53;UBERON:0002616,2.78e-07,53;UBERON:0001049,4.30e-07,56;UBERON:0005068,4.30e-07,56;UBERON:0006241,4.30e-07,56;UBERON:0007135,4.30e-07,56;UBERON:0001893,5.68e-07,34;UBERON:0001869,5.90e-07,32 | |||
|phase1_expression=1.81678379270557,5.78071414505655,1.83240725324762,3.00219895059391,2.68176656656373,1.74467704820074,7.59899634504932,1.26343974685366,1.56711376919903,0.245733936501509,0,0.873765488520689,1.58260186937072,0.74259811776028,1.65698687863958,1.34465029290355,0.602694528023977,0.730310090387373,1.95173119516203,0.492484232307152,1.63200552995402,0.313454721478088,1.14494394852423,1.50561867580173,0.627713197974014,0.305653622991805,0.164201178899891,0.0787107813136792,0,0,0,0,0.30120591877825,0.739508020333575,0,0,0,0,0.401088894940283,0.217010870715852,0.223915474239924,0,0.257575567634187,1.01778767145695,1.88937971844405,0.970336244751265,0.697287110717054,2.05583944010913,0.929119112685311,2.01384674625505,2.30544635876191,0.945928919554341,1.37898272294647,1.93645405075148,1.35426486594342,1.31769637679823,0.272906150057846,0.449446968890169,1.22433556948361,0.641858054152187,0,1.31940520074686,1.79517291859469,0.852449501065388,1.16083695451434,0.56738522469114,1.24564449799115,1.7587406567972,4.17186334736161,1.3031330682307,1.81619850790011,0.368277635987565,1.26584954976354,0.211255286311942,0.212604299965044,0,0.22465726229299,0.901061357049038,0.16072558669708,0,0.39783335439818,0,0,0,0.889509253863555,0.426730222566507,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0.205601498999509,0,0,0.473447805734733,0,0,0,0,0.541607727530031,0.640456598628376,0.130059347559878,0.164437904603676,0.829050053357545,0,0.14828656316206,0,0,0.113309342697566,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0.201606743224732,0,0,12.1903433156981,0.670700859703636,0.511450247374121,2.53007406669196,0.50133791063589,1.01392563272577,0,0.973269740605272,0.472674085820339,1.33037638477538,0.263504357079378,0.327447688744282,0.728590576585084,0.370784442784429,0.324547393654683,0.522389211897802,1.32957960518865,0,0,0.371457501329565,0.39752481473341,0,1.04142150482278,1.13061588384802,0.838998872419812,1.6507082516404,0.626984899610432,1.03366703667732,0.71153252537342,1.00416183829401,0.402829317109147,0.760272105718513,1.46437234528902,0.367663080345869,0.81014194788176,0.357198913136319,0.673588117878509,0.337834441449967,0,0.949265659568129,0.366403487860815,0,0,0.436094052142534,1.49091585508596,0.379891534993739,0.794455084879313,2.0078563452417,1.41867352879343,1.12135520028461,3.20246987189115,2.22000793575444,0.622422070799533,1.75123873690594,0.817309515567294,1.05950199351452,1.15235184896,0.937285727335186,2.18512053781224,1.1409436430889,1.49448680551801,0.587172493218824,1.29498355494505,1.68540968042698,0.61246251376468,1.10550885580591,1.23990937410919,1.18800285728205,3.70900393917835,0.910161361938026,3.59309070908119,0.168336113954066,1.37630371859161,0.554128230968366,0.877955241761676,1.5324389789951,0.751190294532984,0.226864366320042,2.69084453533293,0.85422955527427,1.48352330811693,1.80054657650641,0.618315175430633,0.772921620136887,0.930584281657949,1.18143432568886,0.68205903612839,3.5340728394176,0.460249493211497,0.484938170456436,1.77504796258307,0.403008392910561,0.339121184620975,1.93260853163297,1.63647672354501,1.14721838155602,0.121973706129595,0.795178609928912,0.348581828608555,0.414644220061482,0.504641701751257,0.36497735907583,0,0,1.38134921352481,0.928735856063958,0.721879481669586,0.591534000199219,0.168584690078102,0.723033089650446,0.55146986366197,0,0.237270619111097,0.943819157121151,0.588664395376038,0.769494313892781,0.738155454624648,0,0,0,1.26755034821831,0.982827216677626,0.590789906681404,0.441463099414651,0.245976877086227,0.857839051492628,0.548751427043128,0,1.10581869652794,0.0925884451585296,1.62904152655162,2.07986957055916,0,0.463721619900307,0.821860859650752,1.15493158208859,1.38895653772983,1.33177906564219,0,0,0.492434012174795,0.468008530278475,0.743155811443641,1.87467667973554,0.16798212819886,0.141775097242386,0.358234090811393,0.581267877027924,0.766765358330422,0,0.264145302039678,0,0,0.50496973370552,0.317489471460845,0.763976851116555,0,0,1.23392991243988,1.20137223137567,0.285826432630578,0.672786506072164,0,0.5867062865676,1.80980402060889,0,1.690605505112,1.06375246633948,1.04007436911366,0.257207374262142,1.41849132023278,1.0656887160644,2.57360388584666,1.08524321078289,0.823240336780769,0.977208552881205,0,0,1.50719688529793,0.871533458600294,2.39935178836937,1.2162378064119,1.50677127429638,0,1.91699884393266,2.29723871668228,0,3.76431397335706,2.05476322550383,1.25342674267927,0.224170287987055,0.197030760201927,0,0.256686072559497,1.01637849688985,1.30139853857622,1.54657762555539,0.167516265334349,0.637938751653163,0.749007023947182,0,0.828831026872071,0.858840442033979,2.00068208423871,1.89885516589815,1.66376689224646,4.81758269752337,2.68094105557689,1.63997980989798,0.902838299183157,0,1.03473071292505,1.99267679560631,0.921845842708516,0.521301686808497,0.587403472388222,1.02943027143257,0,0.215714200818617,0.106727557803444,0.303127571446259,0,0.30239029332968,0.744323423456331,0.460385919864187,3.08726103876381,3.07533958213682,2.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| |||
|short_description=p13@RTN4 | |||
}} |
Revision as of 03:12, 21 January 2014
Short description: | p13@RTN4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | No |
Description: | CAGE_peak_13_at_RTN4_5end |
Coexpression cluster: | NA |
Association with transcript: | 59bp_to_AK090714_5end |
EntrezGene: | RTN4 |
HGNC: | 14085 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.53e-08 | 76 |
Ontology term | p-value | n |
---|---|---|
brain grey matter | 8.37e-09 | 34 |
gray matter | 8.37e-09 | 34 |
regional part of telencephalon | 8.31e-08 | 32 |
regional part of forebrain | 1.57e-07 | 41 |
forebrain | 1.57e-07 | 41 |
anterior neural tube | 1.57e-07 | 41 |
future forebrain | 1.57e-07 | 41 |
regional part of nervous system | 2.78e-07 | 53 |
regional part of brain | 2.78e-07 | 53 |
neural tube | 4.30e-07 | 56 |
neural rod | 4.30e-07 | 56 |
future spinal cord | 4.30e-07 | 56 |
neural keel | 4.30e-07 | 56 |
telencephalon | 5.68e-07 | 34 |
cerebral hemisphere | 5.90e-07 | 32 |