FFCP PHASE1:Hg19::chr2:42396472..42396563,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27436 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1316 | |||
|TSSclassifier=strong | |||
|UniProt=Q9HC35,B5MCW9,A6H8Y6 | |||
|association_with_transcript=0bp_to_ENST00000318522,ENST00000402711,ENST00000409040,ENST00000482660,NM_001145076,NM_019063,uc002rsh.3,uc002rsi.2,uc010fap.2_5end | |||
|coexpression_cluster_id=C2290 | |||
|description=CAGE_peak_1_at_EML4_5end | |||
|id=chr2:42396472..42396563,+ | |||
|ontology_enrichment_celltype=CL:0000738!4.21e-35!140;CL:0002087!2.69e-31!119;CL:0002031!6.22e-28!124;CL:0000037!8.13e-25!172;CL:0000566!8.13e-25!172;CL:0002032!3.88e-23!165;CL:0000837!3.88e-23!165;CL:0000988!2.94e-21!182;CL:0002057!5.21e-19!42;CL:0000766!1.65e-18!76;CL:0000860!6.07e-18!45;CL:0000557!2.10e-15!71;CL:0002009!2.76e-15!65;CL:0000542!6.74e-15!53;CL:0000051!6.74e-15!53;CL:0002194!1.10e-14!63;CL:0000576!1.10e-14!63;CL:0000040!1.10e-14!63;CL:0000559!1.10e-14!63;CL:0000838!1.37e-14!52;CL:0000839!5.96e-13!70;CL:0000134!1.23e-11!358;CL:0000791!5.28e-11!18;CL:0000789!5.28e-11!18;CL:0002420!5.28e-11!18;CL:0002419!5.28e-11!18;CL:0000790!5.28e-11!18;CL:0002320!8.82e-11!365;CL:0000219!3.79e-10!390;CL:0000763!7.97e-10!112;CL:0000049!7.97e-10!112;CL:0000084!1.37e-07!25;CL:0000827!1.37e-07!25;CL:0000625!3.71e-07!11;CL:0000945!9.68e-07!24;CL:0000826!9.68e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.22e-14;33!CL:0002057;1.22e-14;33!CL:0000473;1.15e-11;39!CL:0000234;1.15e-11;39!CL:0000791;5.12e-11;18!CL:0000789;5.12e-11;18!CL:0002419;5.12e-11;18!CL:0000576;1.13e-10;48!CL:0002087;1.36e-10;104!CL:0000542;7.41e-09;53!CL:0000766;1.51e-08;69!CL:0000738;1.03e-07;136!CL:0000084;1.38e-07;25!CL:0000625;3.73e-07;11!CL:0000945;9.92e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,7.87e-36,136;CL:0002087,4.30e-32,115;CL:0002031,1.34e-28,120;CL:0000037,3.48e-25,168;CL:0002032,1.69e-23,161;CL:0000837,1.69e-23,161;CL:0000988,3.27e-22,177;CL:0000766,2.78e-19,72;CL:0000860,5.21e-19,42;CL:0002057,5.21e-19,42;CL:0000473,6.72e-18,48;CL:0000234,6.72e-18,48;CL:0000557,4.40e-16,67;CL:0002009,4.95e-16,61;CL:0002194,2.00e-15,59;CL:0000576,2.00e-15,59;CL:0000040,2.00e-15,59;CL:0000559,2.00e-15,59;CL:0000542,6.74e-15,53;CL:0000051,6.74e-15,53;CL:0000838,1.37e-14,52;CL:0000839,1.63e-13,66;CL:0000134,5.20e-12,354;CL:0002320,3.92e-11,361;CL:0000791,5.28e-11,18;CL:0000789,5.28e-11,18;CL:0002420,5.28e-11,18;CL:0002419,5.28e-11,18;CL:0000790,5.28e-11,18;CL:0000219,1.79e-10,386;CL:0000763,4.77e-10,108;CL:0000049,4.77e-10,108;CL:0000084,1.37e-07,25;CL:0000827,1.37e-07,25;CL:0000625,3.71e-07,11;CL:0000945,9.68e-07,24;CL:0000826,9.68e-07,24 | |||
|ontology_enrichment_development_v019=CL:0002057;4.69e-14;42!CL:0000790;5.12e-11;18!CL:0000051;7.41e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.91e-18!102;UBERON:0003061!2.91e-18!102;UBERON:0001474!4.13e-15!86;UBERON:0002193!1.73e-14!112;UBERON:0002405!2.96e-13!115;UBERON:0002371!3.72e-13!80;UBERON:0004765!2.01e-12!101;UBERON:0001434!2.01e-12!101;UBERON:0002384!2.72e-12!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.59e-19,98;UBERON:0003061,8.59e-19,98;UBERON:0001474,1.23e-15,82;UBERON:0002193,7.59e-15,108;UBERON:0002371,1.21e-13,76;UBERON:0004765,7.49e-13,90;UBERON:0002384,1.14e-12,371;UBERON:0001434,2.09e-12,100;UBERON:0002405,7.85e-12,93 | |||
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| |||
|short_description=p1@EML4 | |||
}} |
Revision as of 02:47, 21 January 2014
Short description: | p1@EML4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EML4_5end |
Coexpression cluster: | C2290_Neutrophils_CD8_Eosinophils_CD14_CD4_hepatocellular_Natural |
Association with transcript: | 0bp_to_ENST00000318522, ENST00000402711, ENST00000409040, ENST00000482660, NM_001145076, NM_019063, uc002rsh.3, uc002rsi.2, uc010fap.2_5end |
EntrezGene: | EML4 |
HGNC: | 1316 |
UniProt: | Q9HC35B5MCW9A6H8Y6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.59e-19 | 98 |
blood island | 8.59e-19 | 98 |
bone element | 1.23e-15 | 82 |
hemolymphoid system | 7.59e-15 | 108 |
bone marrow | 1.21e-13 | 76 |
skeletal element | 7.49e-13 | 90 |
connective tissue | 1.14e-12 | 371 |
skeletal system | 2.09e-12 | 100 |
immune system | 7.85e-12 | 93 |