FFCP PHASE1:Hg19::chr2:34022913..34022919,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C52 | |||
|description=CAGE_peak_at_chr2:34022913..34022919,+ | |||
|id=chr2:34022913..34022919,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000322;7.42e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,7.42e-11,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.37e-12;10!UBERON:0005564;2.37e-12;10 | |||
|ontology_enrichment_disease=DOID:1036!5.01e-14!8;DOID:2355!1.63e-08!1;DOID:0060085!2.69e-08!1;DOID:3165!2.69e-08!1;DOID:0060121!2.69e-08!1;DOID:2438!2.69e-08!1;DOID:4418!2.69e-08!1;DOID:0050619!3.83e-08!1;DOID:1357!3.83e-08!1;DOID:162!8.17e-08!235;DOID:2531!1.31e-07!51;DOID:0060083!1.31e-07!51;DOID:14566!1.43e-07!239;DOID:0060058!6.99e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:3910;1.33e-15;2!DOID:3908;5.08e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,1.33e-15,2;DOID:3908,5.08e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0001764!3.83e-08!1;UBERON:0001825!3.83e-08!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;1.33e-15;2!UBERON:0002173;1.33e-15;2!UBERON:0002186;1.33e-15;2!UBERON:0000473;3.53e-15;8!UBERON:0003135;2.55e-11;11!UBERON:0004821;7.42e-11;3!UBERON:0007499;7.42e-11;3!UBERON:0003215;7.42e-11;3!UBERON:0010368;7.42e-11;3!UBERON:0009911;7.42e-11;3!UBERON:0002299;7.42e-11;3!UBERON:0006524;7.42e-11;3!UBERON:0008874;7.42e-11;3!UBERON:0002169;7.42e-11;3!UBERON:0004894;7.42e-11;3!UBERON:0009856;1.82e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,1.33e-15,2;UBERON:0002173,1.33e-15,2;UBERON:0002186,1.33e-15,2;UBERON:0000473,3.53e-15,8;UBERON:0003135,2.55e-11,11;UBERON:0004821,7.42e-11,3;UBERON:0003215,7.42e-11,3;UBERON:0010368,7.42e-11,3;UBERON:0009911,7.42e-11,3;UBERON:0002299,7.42e-11,3;UBERON:0006524,7.42e-11,3;UBERON:0008874,7.42e-11,3;UBERON:0002169,7.42e-11,3;UBERON:0004894,7.42e-11,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44076983047484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,13.8189796504073,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,9.40738506083235,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0.19606253431774,0.167821586975843,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.00646838828985,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0,0,0,0,0.19871461170299,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196300467230486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,1.05868461514708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.39516449665789,4.82335434281121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:34022913..34022919,+ | |||
}} |
Revision as of 02:32, 21 January 2014
Short description: | p@chr2:34022913..34022919, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:34022913..34022919, + |
Coexpression cluster: | C52_adult_NK_chronic_cord_testis_embryonic_myeloma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 7.42e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 1.33e-15 | 2 |
alveolar duct | 1.33e-15 | 2 |
bronchiole | 1.33e-15 | 2 |
testis | 3.53e-15 | 8 |
male reproductive organ | 2.55e-11 | 11 |
pulmonary alveolus epithelium | 7.42e-11 | 3 |
alveolus | 7.42e-11 | 3 |
pulmonary lobule | 7.42e-11 | 3 |
lobule | 7.42e-11 | 3 |
alveolus of lung | 7.42e-11 | 3 |
alveolar system | 7.42e-11 | 3 |
pulmonary acinus | 7.42e-11 | 3 |
alveolar sac | 7.42e-11 | 3 |
alveolar wall | 7.42e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 1.33e-15 | 2 |
non-small cell lung carcinoma | 5.08e-07 | 5 |