FFCP PHASE1:Hg19::chr2:31607681..31607710,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7498 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12805 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-420bp_to_ENST00000476043_5end | |||
|description=CAGE_peak_3_at_XDH_5end | |||
|id=chr2:31607681..31607710,- | |||
|ontology_enrichment_celltype=CL:0000066!2.32e-28!254;CL:0002076!1.62e-16!43;CL:0000223!1.02e-12!59;CL:0000063!2.17e-09!578;CL:0000220!2.92e-09!246;CL:0002321!4.95e-09!248;CL:0000548!8.32e-09!679;CL:0000004!8.32e-09!679;CL:0000255!8.32e-09!679;CL:0000076!1.26e-08!62;CL:0000012!1.41e-08!682;CL:0002159!2.36e-08!13;CL:0002077!5.19e-08!33;CL:0000197!5.42e-08!6;CL:0000098!5.42e-08!6;CL:0002167!5.42e-08!6;CL:0002368!2.22e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002076;5.77e-13;42!CL:0002368;8.46e-11;13!CL:0000307;1.79e-08;3!CL:0000313;2.73e-07;1!CL:0002336;8.72e-07;1!CL:0002261;8.72e-07;1!CL:0002170;8.72e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,5.11e-17,42;CL:0000223,3.71e-16,58;CL:0000066,3.40e-14,253;CL:0002368,9.03e-11,13;CL:0000076,8.11e-09,63;CL:0000068,1.79e-08,3;CL:0000069,1.79e-08,3;CL:0000307,1.79e-08,3;CL:0000377,1.79e-08,3;CL:0000313,2.82e-07,1;CL:0002336,6.02e-07,1;CL:0002261,6.02e-07,1;CL:0002170,6.02e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000223;1.82e-10;58!CL:0000377;1.79e-08;3 | |||
|ontology_enrichment_disease=DOID:305!8.83e-18!106;DOID:0050687!1.77e-15!143;DOID:1749!1.93e-14!14;DOID:14566!3.56e-10!239;DOID:162!8.84e-10!235;DOID:193!2.75e-08!29;DOID:120!3.56e-08!27 | |||
|ontology_enrichment_disease_v019=DOID:1749;3.16e-19;14!DOID:2152;2.73e-07;1!DOID:6193;8.72e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.92e-19,14;DOID:0050687,5.37e-09,143;DOID:305,6.34e-09,106;DOID:2152,2.82e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0004119!6.72e-08!169;UBERON:0000925!6.72e-08!169;UBERON:0006595!6.72e-08!169;UBERON:0003102!9.42e-08!95;UBERON:0003729!5.31e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;2.73e-07;1!UBERON:0007195;8.72e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,2.82e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,2.58827807116751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.397227542439656,0.286836620748814,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0.448346041655403,0,0,0,0,0,0.103325781175765,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0.150238058906597,0,0.179389635688862,0,0.423863802319124,0.600182192168805,0.103052529238439,1.03056216018252,0,0.506328996723799,0.194874010322397,0,0,0,0,0.201504196455281,0,0.966304265816484,0.272746120590835,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0.237270619111097,0.134831308160164,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0.439001141634502,1.1240175325762,0.804231779293047,1.574003567695,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81201501960331,0.671928512795438,0.567100388969546,2.05984602216551,1.16253575405585,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0.831883446123229,0.535286966391485,0.630809660135739,0.585707074963566,0,0,0,0,1.10621501125022,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0,0,0,0.177561725313127,0.246381468041427,0,0,0,1.00253235151642,0.184161977871793,0,0,0,0,0.462092022626489,0,0,0.316654886678627,0,0,0,0,0,0,0.509752546090077,0.831076008928724,0.223874754722178,0,0,0,0,0,0,0,0,0.574265537996172,0.650060246036521,0,0.096670718292122,0,0,0,0,0,0,0,0.495854746082934,1.15314040419064,4.08360679982669,0.708104465988849,0,0.62962469366128,0,0,0,0,0,0.429374660225974,0,0,0,0.255897791311334,0,0,0.78494864019923,0,0,0.117812402345686,0.202182481573316,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0.202910376962704,0,0,0,0,0.35667105148125,0,0,0,0.379473173765715,0,0.769776901804097,1.34060455107157,2.17781969722645,0.0941438007767792,0.43050537267123,0,0.443430153536676,0.689170200620878,0,0,0,0,0,0,0,0,0,0,1.22520107990516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.667852230137435,0,0,0,0,0,0,0,0,0.539210106883961,0.716084698702437,0,0.0986434056369336,0,1.11136990144637,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0,0.697118721393016,0,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.28525931422807,0,0,0,0,0,0,0,0,0,0,0,0,1.9566461893209,0,0,0,0,0,0,0,0,0,0,0,5.12297182853627,0.554698692052555,0.520679215005393,0.489961987071888,10.4471047896483,0,1.20390222730132,0.290268993867255,0.0730893170861856,0.164230914106418,0,0,0,0.137041924646751,0,0,0.195551382734803,1.52301758477914,0,0.19980960958213,0,0,0,1.1524383839052,0.248505071130865,0.942776138467182,0.271808412147228,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0.950403028674658,0,1.53532157855556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.855434189421647,0.704815022316672,0,0,0,0,0,0,5.74507131993164,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0.470531639396343,0,0,0.149254802886874,0,0,0.189403005275089,0.251567901752575,0,0.228840068396924,0,0.15543720058278,0.443565449968902,0.159296767163702,0.449803112163605,0.155262956876259,0,0.797525143673985,0,0,0.380805212168795,0,0.181848659202559,0.107410557042488,0,0,0,0,0,0,0.385239660814607,1.71553273099941,0,0.226705925512272,0,0,0.358177682162975,0,0.438568099157414,2.8270263351341,0.192914038270915,0,0,0,0,0,0,0,0,0,0.737318726261158,0,0,0,0,0.567515953566836,0,0.839277046316667,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92590874004102,0.353909170043221,0.366857197043358,1.27078232765372,0,0.690359926060101,0,0,0.20170506870352,0,0,0.982631505060581,0.887136517302272,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.177404740325278,0,0,0,0,0.590969204419841,0.111231401892069,0,0,0,0,0.431855182437243,0,0,0,0,0,0,2.48659396995644,0.6828739083758,0,0,0.354996002191696,0.596493833314104,0,1.8328549483524,0,0.955538938977433,3.80308468112494,0.294450700845729,0.243835849964539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0.892769693028288,2.11736923029415,0.641930933513346,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0.33639558774184,0,0,0,0,0,0.0717222053926763,0,0.569822880276821,0.213454691755431,1.9307228228694,0,0,0,0,0,0,0 | |||
|short_description=p3@XDH | |||
}} |
Revision as of 02:29, 21 January 2014
Short description: | p3@XDH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_XDH_5end |
Coexpression cluster: | NA |
Association with transcript: | -420bp_to_ENST00000476043_5end |
EntrezGene: | XDH |
HGNC: | 12805 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 5.11e-17 | 42 |
endodermal cell | 3.71e-16 | 58 |
epithelial cell | 3.40e-14 | 253 |
respiratory epithelial cell | 9.03e-11 | 13 |
squamous epithelial cell | 8.11e-09 | 63 |
duct epithelial cell | 1.79e-08 | 3 |
branched duct epithelial cell | 1.79e-08 | 3 |
tracheal epithelial cell | 1.79e-08 | 3 |
tracheoblast | 1.79e-08 | 3 |
serous secreting cell | 2.82e-07 | 1 |
buccal mucosa cell | 6.02e-07 | 1 |
endothelial cell of viscerocranial mucosa | 6.02e-07 | 1 |
keratinized cell of the oral mucosa | 6.02e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 2.82e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.92e-19 | 14 |
cell type cancer | 5.37e-09 | 143 |
carcinoma | 6.34e-09 | 106 |
ovary epithelial cancer | 2.82e-07 | 1 |