FFCP PHASE1:Hg19::chr2:29353400..29353413,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79745 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26108 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-66bp_to_ENST00000471165_5end | |||
|coexpression_cluster_id=C125 | |||
|description=CAGE_peak_28_at_CLIP4_5end | |||
|id=chr2:29353400..29353413,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.75e-10!254 | |||
|ontology_enrichment_celltype_v019=CL:0000319;1.46e-50;1!CL:0000159;4.32e-26;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,1.46e-50,1;CL:0000159,4.32e-26,2 | |||
|ontology_enrichment_development_v019=UBERON:0009497;3.19e-16;13!UBERON:0001041;1.06e-15;30 | |||
|ontology_enrichment_disease=DOID:305!4.90e-19!106;DOID:0050687!5.60e-15!143;DOID:162!1.28e-08!235;DOID:1749!2.66e-08!14;DOID:14566!3.06e-08!239;DOID:0050615!4.73e-08!16 | |||
|ontology_enrichment_disease_v019=DOID:3030;1.46e-50;1!DOID:5662;6.58e-50;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,1.46e-50,1;DOID:5662,6.58e-50,1;DOID:305,2.62e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0002394!7.13e-11!4;UBERON:0003928!7.13e-11!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002394;1.06e-13;4!UBERON:0003928;1.06e-13;4!UBERON:0002423;5.83e-09;25!UBERON:0002294;2.11e-08;7!UBERON:0001173;2.11e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0008835,4.96e-10,22;UBERON:0003894,4.96e-10,22;UBERON:0009854,1.22e-09,23;UBERON:0002394,1.44e-09,6;UBERON:0003928,1.44e-09,6;UBERON:0007499,5.95e-09,25;UBERON:0009497,5.95e-09,25;UBERON:0000015,5.95e-09,25;UBERON:0002423,5.95e-09,25;UBERON:0006235,5.95e-09,25;UBERON:0004161,5.95e-09,25;UBERON:0009856,1.20e-08,26;UBERON:0002294,8.37e-07,9;UBERON:0001173,8.37e-07,9;UBERON:0004912,8.37e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0.256160706529101,0.236482229888585,0.344745680736619,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0.502497330513487,0,0.217188844705117,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.710019185033229,0,0,0.193260853163297,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0.482022059766964,0,0,0,0,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0.179736702294654,2.14825409610731,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0.284609546029793,0,0.173559738335131,0.195984794828755,0.0870592065804026,0,0.171986032471617,0.387025325156341,0.219267951258557,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492137407573744,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0.896436696664224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342173675768659,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0.231522474323834,0.244736704506468,0,0,0,0,0,0,0.512483037175893,0,0,0,0,0,0,0,5.40700399258183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0.196295437002051,0.235939446695481,0,0.115525666150338,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,1.20041606606193,0,0,0.472775363535873,0,0,0,0,0,0,0,0.0714765441766563,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0.45178432815584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,2.88868920081006,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p28@CLIP4 | |||
}} |
Revision as of 02:24, 21 January 2014
Short description: | p28@CLIP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_28_at_CLIP4_5end |
Coexpression cluster: | C125_mucinous_alveolar_mesothelioma_Smooth_lung_CD14_Nucleus |
Association with transcript: | -66bp_to_ENST00000471165_5end |
EntrezGene: | CLIP4 |
HGNC: | 26108 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 1.46e-50 | 1 |
seromucus secreting cell | 4.32e-26 | 2 |
Ontology term | p-value | n |
---|---|---|
hepatic diverticulum | 4.96e-10 | 22 |
liver primordium | 4.96e-10 | 22 |
digestive tract diverticulum | 1.22e-09 | 23 |
bile duct | 1.44e-09 | 6 |
digestive system duct | 1.44e-09 | 6 |
epithelial sac | 5.95e-09 | 25 |
epithelium of foregut-midgut junction | 5.95e-09 | 25 |
anatomical boundary | 5.95e-09 | 25 |
hepatobiliary system | 5.95e-09 | 25 |
foregut-midgut junction | 5.95e-09 | 25 |
septum transversum | 5.95e-09 | 25 |
sac | 1.20e-08 | 26 |
biliary system | 8.37e-07 | 9 |
biliary tree | 8.37e-07 | 9 |
biliary bud | 8.37e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 1.46e-50 | 1 |
pleomorphic carcinoma | 6.58e-50 | 1 |
carcinoma | 2.62e-08 | 106 |