FFCP PHASE1:Hg19::chr2:27545446..27545457,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4358 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7224 | |||
|TSSclassifier=strong | |||
|UniProt=P39210 | |||
|association_with_transcript=-15bp_to_ENST00000233545,uc002rjr.2_5end | |||
|description=CAGE_peak_5_at_MPV17_5end | |||
|id=chr2:27545446..27545457,- | |||
|ontology_enrichment_celltype=CL:0000066!6.17e-08!254 | |||
|ontology_enrichment_celltype_v019=CL:0000840;1.08e-17;5!CL:0002591;2.91e-12;1!CL:0000990;5.42e-12;8!CL:0000451;6.56e-10;10!CL:0000235;1.91e-08;6!CL:0002159;1.14e-07;14!CL:0000650;9.27e-07;2!CL:1000500;9.27e-07;2!CL:1000618;9.27e-07;2!CL:1001318;9.27e-07;2!CL:0000575;9.27e-07;2!CL:0002561;9.27e-07;2!CL:0002363;9.27e-07;2!CL:0002173;9.27e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000840,1.03e-17,5;CL:0001029,1.03e-17,5;CL:0002591,3.85e-12,1;CL:0000990,5.23e-12,8;CL:0000451,6.37e-10,10;CL:0000235,1.87e-08,6;CL:0002159,1.16e-07,14;CL:0000650,7.61e-07,2;CL:1000500,7.61e-07,2;CL:1000618,7.61e-07,2;CL:1001318,7.61e-07,2;CL:0002173,7.61e-07,2;CL:0000575,9.02e-07,2;CL:0002561,9.54e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000008;9.27e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003891;7.11e-12;4!UBERON:0000964;7.11e-12;4!UBERON:0010409;7.11e-12;4!UBERON:0010313;2.06e-10;10!UBERON:0003566;9.27e-07;2!UBERON:0000078;9.27e-07;2!UBERON:0003567;9.27e-07;2!UBERON:0003838;9.27e-07;2!UBERON:0003586;9.27e-07;2!UBERON:0005169;9.27e-07;2!UBERON:0005933;9.27e-07;2!UBERON:0002321;9.27e-07;2!UBERON:0001777;9.27e-07;2!UBERON:0002012;9.27e-07;2!UBERON:0005942;9.27e-07;2!UBERON:0005215;9.27e-07;2!UBERON:0002303;9.27e-07;2!UBERON:0008886;9.27e-07;2!UBERON:0002319;9.27e-07;2!UBERON:0005932;9.27e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003891,7.12e-12,4;UBERON:0000964,8.39e-12,4;UBERON:0010409,8.39e-12,4;UBERON:0004348,8.39e-12,4;UBERON:0005427,8.39e-12,4;UBERON:0010313,2.47e-10,10;UBERON:0002342,2.47e-10,10;UBERON:0005062,2.47e-10,10;UBERON:0003567,7.61e-07,2;UBERON:0003838,7.61e-07,2;UBERON:0003586,7.61e-07,2;UBERON:0005169,7.61e-07,2;UBERON:0002321,7.61e-07,2;UBERON:0005215,7.61e-07,2;UBERON:0002303,7.61e-07,2;UBERON:0002319,7.61e-07,2;UBERON:0005933,9.54e-07,2;UBERON:0005942,9.54e-07,2;UBERON:0005932,9.54e-07,2 | |||
|phase1_expression=0,0.642301571672949,0,0,0.893922188854576,0,0,0,0,0,0,0.436882744260345,0.263766978228454,0.618831764800233,0.331397375727916,0,0,0,0,0,0,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447830948479849,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.189069634328136,0,0.175669571386252,0.0654895377488563,1.45718115317017,0,4.21911611751088,3.83085422058388,5.45127638127347,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0.24666754841716,0.622422070799533,0,0,0,0,0.234321431833797,0.312160076830321,0.570471821544449,0,0.117434498643765,0,0,0.204154171254893,0.122834317311768,0.206651562351531,0,0,0,0.718618141816238,0,0,0,0,0,0.150238058906597,0.113432183160021,0,0.213557388818567,0.211931901159562,0,0.103052529238439,0,0,0,0.292311015483596,0,0,0,0,0.10075209822764,0,0.386521706326594,0,0.573609190778008,0,0,0,0,0,0,0,0,0,0.464367928031979,1.44375896333917,0.709840800239063,1.01150814046861,0.241011029883482,0.772057809126758,0.217879444092406,1.18635309555548,0.404493924480493,0,0,0,0,0,0,0,0,0,0,0,0,0.439001141634502,3.37205259772859,0,0.185176890317059,0,1.03993478527958,0,0,0,0,0,0,0,0,0,2.10603838625314,0.743155811443641,0,0.335964256397719,0.141775097242386,0,0.290633938513962,0.383382679165211,0.492663237895943,0,0,0,0,0.253991577168676,0.763976851116555,0,1.71072446022705,0.102827492703324,0,0,0.112131084345361,0,0,0.387815147273333,0,0,0.797814349754612,2.08014873822732,0,0,0,0.142977993658148,0,0.823240336780769,0,0.355391948742546,0,0,0,0,3.64871341923571,0.502257091432126,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,1.50051156317903,0.271265023699736,0.207970861530807,0.356857977594324,0.315404830067869,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,6.65741758041988,0.907170879989041,0.496215615637554,0,0,0.128139149255701,0,0.160853921143607,0,0.154209693802656,0,0,0,0.116210378459959,0,0.200506470303285,0.0920809889358963,0,0,0,0.451199612907412,0,0.784349769176855,1.46139224653261,0,0,0,0,0,0.812839312631559,1.50506932156456,0.764628819135115,0,0.447749509444357,0,0,0,0,0,0,0,0,0.574265537996172,0.650060246036521,0,0.096670718292122,0,0.15350367472613,0,0.322260734604821,0,0.0852266274161009,0,0,0,0,0.10115778085555,0.464845549297286,0,0,0,0,0,0,0.143124886741991,0.372158369359667,0.316379424718726,0,0,0,0,0,0,0,0.589062011728432,0.202182481573316,0,0,0,0,0,0,0.141405431953713,1.13008116620243,0.551365343546124,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0.422215270595328,0,0,0,0.384888450902048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20453736500431,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569710279235006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0.171986032471617,0.0967563312890851,0.0730893170861856,0.0821154570532092,0,0,0,0.137041924646751,0.596143835108969,0,0.195551382734803,0,0,0.19980960958213,0,0.114536596165916,0,0,0.124252535565433,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0.202210631562555,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0.394028536495991,0,0.211200673038813,0,0.383830394638891,0,0,0,0.542999601753713,0,0.653174720218818,0,0,0.340776043570843,0,0.146552233678082,0,0,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0.122026264901963,0,0,0,0.124192805882767,0,0,0.454947352624943,0,0,0,0,0,0.233713309847224,0,0.378806010550178,0.251567901752575,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0.380805212168795,0,0.181848659202559,0.107410557042488,0.464033759878494,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0.179088841081487,0,0,0.176689145945881,0.192914038270915,0.168942440653073,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0.0887023701626388,0,0,0,0,0.945550727071746,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0.207216164163037,0.3414369541879,0,0,0.118332000730565,0.170426809518315,0,0.22910686854405,0,0,0,0.294450700845729,0,0,0,0,0,0,0.198950775161368,0,0,0,0.150962843566674,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0.203974470572744,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0.0636471582781649,0,0,0,0,0.0717222053926763,0,0,0.106727345877715,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p5@MPV17 | |||
}} |
Revision as of 02:15, 21 January 2014
Short description: | p5@MPV17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_MPV17_5end |
Coexpression cluster: | NA |
Association with transcript: | -15bp_to_ENST00000233545, uc002rjr.2_5end |
EntrezGene: | MPV17 |
HGNC: | 7224 |
UniProt: | P39210 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immature conventional dendritic cell | 1.03e-17 | 5 |
common dendritic progenitor | 1.03e-17 | 5 |
smooth muscle cell of the pulmonary artery | 3.85e-12 | 1 |
conventional dendritic cell | 5.23e-12 | 8 |
dendritic cell | 6.37e-10 | 10 |
macrophage | 1.87e-08 | 6 |
general ecto-epithelial cell | 1.16e-07 | 14 |
mesangial cell | 7.61e-07 | 2 |
kidney interstitial cell | 7.61e-07 | 2 |
juxtaglomerular complex cell | 7.61e-07 | 2 |
renal interstitial pericyte | 7.61e-07 | 2 |
extraglomerular mesangial cell | 7.61e-07 | 2 |
corneal epithelial cell | 9.02e-07 | 2 |
outer root sheath cell | 9.54e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
stroma | 7.12e-12 | 4 |
cornea | 8.39e-12 | 4 |
eye surface | 8.39e-12 | 4 |
optic eminence | 8.39e-12 | 4 |
corneal primordium | 8.39e-12 | 4 |
neural crest-derived structure | 2.47e-10 | 10 |
neural crest | 2.47e-10 | 10 |
neural fold | 2.47e-10 | 10 |
abdomen connective tissue | 7.61e-07 | 2 |
abdominal segment connective tissue | 7.61e-07 | 2 |
trunk connective tissue | 7.61e-07 | 2 |
interstitial tissue | 7.61e-07 | 2 |
extraglomerular mesangium | 7.61e-07 | 2 |
kidney interstitium | 7.61e-07 | 2 |
juxtaglomerular apparatus | 7.61e-07 | 2 |
mesangium | 7.61e-07 | 2 |
hair root sheath | 9.54e-07 | 2 |
hair outer root sheath | 9.54e-07 | 2 |
bulb of hair follicle | 9.54e-07 | 2 |