FFCP PHASE1:Hg19::chr2:26257526..26257548,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10890 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=9759 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UL28 | |||
|association_with_transcript=0bp_to_AF091032_5end | |||
|description=CAGE_peak_6_at_RAB10_5end | |||
|id=chr2:26257526..26257548,+ | |||
|ontology_enrichment_celltype=CL:0002009!1.79e-11!65;CL:0002194!4.03e-11!63;CL:0000576!4.03e-11!63;CL:0000040!4.03e-11!63;CL:0000559!4.03e-11!63;CL:0002057!1.39e-10!42;CL:0000860!9.70e-10!45;CL:0000839!5.77e-09!70;CL:0000557!8.18e-09!71;CL:0000766!4.43e-08!76 | |||
|ontology_enrichment_celltype_v019=CL:0000473;2.48e-11;39!CL:0000234;2.48e-11;39!CL:0000860;8.28e-11;33!CL:0002057;8.28e-11;33!CL:0000576;8.47e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.41e-16,48;CL:0000234,1.41e-16,48;CL:0002194,3.33e-14,59;CL:0000576,3.33e-14,59;CL:0000040,3.33e-14,59;CL:0000559,3.33e-14,59;CL:0002009,3.35e-14,61;CL:0000860,3.02e-13,42;CL:0002057,3.02e-13,42;CL:0000766,3.45e-12,72;CL:0000557,6.93e-12,67;CL:0000839,1.72e-11,66;CL:0000763,5.05e-08,108;CL:0000049,5.05e-08,108 | |||
|ontology_enrichment_development_v019=CL:0002057;1.93e-09;42 | |||
|ontology_enrichment_disease=DOID:14566!4.23e-09!239;DOID:162!1.17e-08!235;DOID:0050687!1.68e-08!143;DOID:305!1.63e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.07e-09!80;UBERON:0001474!7.32e-08!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.31e-14,76;UBERON:0001474,2.49e-12,82;UBERON:0002390,1.32e-11,98;UBERON:0003061,1.32e-11,98;UBERON:0002405,4.22e-11,93;UBERON:0004765,9.13e-11,90;UBERON:0002193,2.34e-10,108;UBERON:0001434,6.21e-09,100 | |||
|phase1_expression=0.54503513781167,2.5692062866918,0.563817616383885,1.0007329835313,0.446961094427288,1.74467704820074,0,0,0.261185628199839,0.737201809504527,0,0.436882744260345,0.263766978228454,0.37129905888014,1.32558950291166,2.01697543935533,3.01347264011988,0.730310090387373,0.975865597581014,0.861847406537515,0.204000691244253,0,0,0.684372125364421,0.502170558379211,0.0764134057479513,0.164201178899891,0.314843125254717,0,0,0.154816123316076,0,0.30120591877825,0.369754010166788,0.619737604642413,0.995184627411951,0,0,0.200544447470142,0.217010870715852,0.895661896959697,0.971680998056939,0.257575567634187,2.18097358169347,1.51150377475524,0.970336244751265,1.62700325833979,2.05583944010913,1.23882548358041,1.1507695692886,0.768482119587302,1.41889337933151,0.344745680736619,1.93645405075148,0,1.50593871634084,1.63743690034707,2.24723484445085,1.22433556948361,2.88836124368484,1.91801137739712,1.64925650093358,1.19678194572979,1.70489900213078,4.06292934080018,4.53908179752912,1.86846674698672,2.26123798731069,2.08593167368081,1.3031330682307,0.605399502633369,1.47311054395026,0.949387162322653,1.05627643155971,1.06302149982522,1.25795187305026,0.898629049171961,0.450530678524519,0.64290234678832,1.14005097496499,0.99458338599545,1.64397738388171,0,0,0,0,0,0,0,0,0.569212969109448,0,0.382273228125229,0,0,0.263384084775077,0,0,0.205601498999509,0,0,0,0,0.445641827540694,0.589211814949674,0.221533894583621,0,0.896639238079726,0.520237390239513,0.822189523018381,0.829050053357545,0,0.444859689486181,0.267540828089713,0,0,0,0,0.759059076058509,0,0,0,0.301150238155546,0.255973222308837,0,0,0,0,0,0,0,0.670700859703636,0.511450247374121,1.0843174571537,1.50401373190767,1.15877215168659,0,1.94653948121054,0.756278537312543,1.10864698731282,0.263504357079378,0.0654895377488563,0.728590576585084,1.11235332835329,3.57002133020152,1.74129737299267,1.46253756570752,0.238490624305342,0,0,0.198762407366705,0.860234595106124,0,0.56530794192401,0.419499436209906,0.275118041940067,0,0.775250277507987,0.35576626268671,1.00416183829401,0.402829317109147,0.760272105718513,0,0,0,0.982297011124877,0.898117490504679,0.337834441449967,1.53316637465883,0,0.366403487860815,1.31780417436063,0,0.872188104285069,1.49091585508596,0.506522046658319,0,0.286836620748814,0.709336764396714,0,1.06748995729705,0.74000264525148,0,0.134710672069688,0.490385709340376,0.302714855289863,0.576175924479999,0,0.624320153660641,0,0.597794722207204,0.117434498643765,0.323745888736263,0.561803226808994,1.02077085627447,0.61417158655884,0.413303124703062,1.18800285728205,1.97813543422845,0,0.718618141816238,0.336672227908132,0.375355559615893,0,0,0.30648779579902,0.45071417671979,0.680593098960126,0.358779271377724,0.640672166455702,0,0.300091096084402,0.515262646192195,0.515281080091258,0.18611685633159,0.168776332241266,0.194874010322397,0.504867548488229,0.552299391853796,0.969876340912871,0.355009592516614,0.302256294682921,0,0.193260853163297,1.36373060295417,0.286804595389004,0.731842236777572,0.397589304964456,0.232387885739037,0.518305275076852,0.756962552626885,0.36497735907583,0,1.92972281457866,0,0.928735856063958,1.44375896333917,0.828147600278907,0.168584690078102,0,0.330881918197182,0.435758888184812,0.71181185733329,0.404493924480493,0.196221465125346,0,0,0,0.4115740113314,0,0,0.982827216677626,0,0,0.614942192715568,0.343135620597051,0.439001141634502,1.1240175325762,0.402115889646523,0.370353780634118,0.325808305310325,1.03993478527958,0,0.231860809950154,0.469634776943287,0.288732895522148,1.38895653772983,0.570762456703795,0.790204397959275,1.71697232418975,1.72351904261178,0.234004265139238,1.18904929830983,0,0.503946384596579,0.283550194484773,0.985143749731331,0.290633938513962,1.15014803749563,0,0.088048434013226,0.207328115540772,0.144119953416961,0.25248486685276,0.190493682876507,0,0,0,0.308482478109971,0.600686115687835,0.285826432630578,0.672786506072164,0,0.22001485746285,1.03417372606222,0,0.845302752556,0.797814349754612,1.04007436911366,0,0,1.0656887160644,0,0,0,0.325736184293735,0,0,0.602878754119172,1.74306691720059,1.59956785891291,2.43247561282381,4.01805673145701,10.5416969741516,0.239624855491583,0,0,0.868687840005475,2.05476322550383,0.537182889719687,1.00876629594175,0,0,0,0.254094624222463,0,0,0.502548796003046,1.27587750330633,1.49801404789436,8.97484377612075,0.414415513436035,0.12269149171914,0.500170521059677,0.542530047399471,0.831883446123229,3.03329280955175,0.788512075169673,0.585707074963566,0,0,0,0.664225598535437,0.553107505625109,0.60818530127658,0.195801157462741,0.686286847621712,0,0,0.106727557803444,0.303127571446259,0,0,0.248107807818777,1.2276957863045,1.12264037773229,0.512556597022804,1.53512174720011,0.965123526861645,0,0.154209693802656,0,0.0821271560138091,0,0.232420756919918,0.120859449591622,0.601519410909855,3.31491560169227,0.803701137152247,1.0925470080403,0.524497659837696,0,0.539107359730903,0,1.46139224653261,0.527758144464379,0,0.850468526382578,0.647747748306418,0,0.541892875087706,1.50506932156456,0.509752546090077,0,0.895499018888713,0.438519753291869,0.784306353074702,0.256450125116389,0.328014645699706,0,0.309123034943167,0.640986253728404,0.082509499920588,0,1.30012049207304,3.21367859688319,0.096670718292122,0.462145851343933,0.767518373630648,1.10269257987624,0.644521469209642,0.725083469571143,0.511359764496605,0.178064071293475,0.495854746082934,0.960950336825531,0.127612712494584,0.809262246844399,0.929691098594572,0,0,0.308033580176089,0,0,0.37064843820784,0.858749320451947,1.116475108079,0.316379424718726,1.14378116354295,0.255897791311334,0.855877976067841,0,0.78494864019923,0.539617372749944,0.54907405947211,0.942499218765491,0,0,0.421258456238981,0,0.731140468893853,1.05650146756755,0.409499734223957,0.989838023675989,0,0,1.32687795048244,0.438450885253763,0,0,0,0.6196469961995,0,0.286822704408103,0.294747123039363,0,0.709522128141196,1.05553817648832,0.658589785919804,0.379473173765715,0,0.577332676353072,0.670302275535787,0,0.470719003883896,1.29151611801369,1.68471475667626,1.33029046061003,0.459446800413919,0.507447609232169,1.52927441428475,0,0.238231775457789,0,0,0,1.58625035258854,0.640944426764839,0.962479855263359,1.71528151186722,0.743212700502875,0.865615277858669,0.497992903438899,1.4348364545594,2.3949524571938,0.383010740264733,0.211673582723883,0.324621940274555,0.842391534340376,0.456469358066384,1.56679895773023,0,0.338583555603207,1.2847046008296,2.01799707191048,0,0.687010689511529,0.307240764308458,0.447352215784832,0.667396566847634,0,0,0,0.270455678475983,0.33307196799782,0,0.37428108081644,0.586032717087576,0,0.780103689942349,0.568272293612826,1.19372242368845,0.593929361665277,1.22864280839693,0,0.281338832821026,1.33570446027487,0.494411622680279,0.63337622438398,0.398495976502139,0,0.503865495708552,1.63629892003448,0.369254416383208,1.55519793830904,0.539210106883961,1.25314822272926,0,0.394573622547734,2.3948309234694,1.11136990144637,0.969332746095218,0.649376687132959,0,1.5625665665114,0.787139999965761,0,0.568967241427498,1.27126825146383,1.18193840883968,1.03423011972439,1.45802306691627,1.04174996959975,0,0.241192877250816,1.52581736317083,0.110579259931225,0.591095237907095,0.219385397153973,0.21787692703798,0.975966209950223,0.230850775511391,0.569710279235006,0.69169171316418,1.07709173291727,0.54323685961004,1.5950057986596,0.457987967009312,2.66517388009317,4.08773192782946,0.470940769185074,0.498635045700469,0.451191321234361,0.392125068635479,0,1.51802986179348,0.317873157960757,1.47698645169619,1.63232808159148,1.13082457147153,0.865554558968364,0.995261931078505,0.0884575645033392,0,1.48260564340311,0.494255755786011,0.626531697032732,0.202203398942031,1.60515529459758,0.468528891450678,0.729819156862664,0.391329237864179,0.242780379534093,0.394584402849391,1.20990716048664,0.61214552326098,0,0.450970258243478,0.414752765588989,0,1.65495977937749,0.627865836814451,3.58417289318877,0.284609546029793,3.18951747930219,1.21491816834592,0.685946781900644,0.609414446062818,0,1.20390222730132,0.483781656445426,0.292357268344742,0.410577285266046,1.26085721434945,0.529536760149002,0,0.685209623233754,0.794858446811959,0.253243183823515,4.10657903743086,0.480952921509202,0.213452994739353,1.39866726707491,0.576361668616424,0.458146384663663,0.857974989309823,0.864328787928898,0.869767748958028,0.707082103850386,0.407712618220842,0.523014231561666,1.12198039399954,0.288950589901519,0,0.547621515567972,0,0.859530882839914,0.262887354279314,0,0,0,0.798716001995964,1.71690419254628,0.223171457441873,0.134366944973453,0,0,0.86661500537946,0.329663433524666,0.471824806979294,0.78741985211799,0.254019996197353,0,0.681017030557878,0.160753148465019,0.550157746388935,3.32352270423348,1.1248694577575,0.77380195455795,0.182248669974074,0.335434687599266,0.0788057072991982,0.104909176269996,0.528001682597033,2.68931008999267,0.383830394638891,0,0,0.5085370753095,1.62899880526114,0,1.95952416065645,0,0.492555124496034,1.36310417428337,0.113312091520126,0,0,0.258565912723101,0.52893040697076,2.22412889249628,0.704815022316672,0.213574825135389,0.628817220398664,0.414239055347196,0.496166021811951,0.988058159489721,0.121792598380896,1.27668251554036,0,0,0.306345576763462,0,0.314108192500469,0.886068179966986,4.14889300666675,0.1251909307065,0,0.554645257684261,0.620964029413834,0.138348634936231,0.249960815924213,0.303298235083296,0.856396000634902,0.705797459094515,2.34167452903441,0.579684114443301,0.895528817321244,1.8697064787778,1.10961172300523,3.21985108967651,2.51567901752575,2.66943366478961,1.60188047877847,2.11723293268535,2.33155800874171,3.40066844976158,2.70804504178294,1.34940933649081,0.465788870628778,2.48823724704513,1.06336685823198,0.521745061811734,1.95334891696384,1.14241563650639,2.84809513243263,1.27294061441792,1.39633724155235,0.464033759878494,1.59238355479446,2.00013882331577,2.06037423109676,1.01024846629776,0,0.57785949122191,0.428883182749851,0.260994291965212,0.226705925512272,0.463044948647668,1.71315693154527,0.537266523244462,0.926404341482917,0.219284049578707,1.23682402162117,1.73622634443823,0.675769762612291,1.02496607435179,1.38172136692479,0.303859956177382,0.138258436151731,0.584580926518165,1.0629187225069,0.981392365535065,5.56936743038901,1.72041036127604,0.422624246717254,0,0.320075189082423,2.41100971525142,1.13503190713367,1.10463570151104,0.279759015438889,1.24415452006595,0.255788742607303,0.431299245586727,0.943595651135378,0.655257829152084,0.33946505990805,0.637724760305049,0.619678821295011,0,0,0.0788617450012534,0.80057074828547,0,1.2249819094128,0.256916900385838,1.41696576325585,0.478901577171454,1.02558182120378,0.504143392443436,0.0691572524642179,0.484426936895553,0,0.88332946650923,0.11796972334774,0.366857197043358,0.808679663052368,0.381382095467167,0,0.198916222116275,0.225630985047772,0.40341013740704,0,0.523813388962845,0.982631505060581,1.47856086217045,0.0675375846183947,0,0.413373593002368,0.19024743058172,0.546974809018219,0,0.992422356778588,0.527613733078862,0.383287282918786,0,0,0,0.227662191351298,0,0.230467975111559,2.05785611324902,0.135939465953663,0.131545547125698,1.41832609060762,1.11231401892069,0.078493092850514,0,0.560544326627578,1.82631744101899,1.07963795609311,1.43325506366115,0.142953088353313,0.632054446930906,0.464965701472501,0.695433089210318,0.801711364730253,1.03608082081518,0.85359238546975,0,0.430227358820278,0.709992004383392,0.852134047591577,0,1.14553434272025,0.62041277132864,3.82215575590973,0.782988022584546,0.883352102537187,1.09726132484042,0.647428837187895,0.410651227424988,0,0.485710993059139,0,1.59160620129095,0.594600453887843,0.33883824611688,0.219881033490858,1.50962843566674,0.154348316215889,0.218559560503957,0.940634592723046,0.735444965261716,0.235676547101626,0.785233868459781,0.594092800654172,0,0.509781344063451,0.187967835959707,0.0644578879735772,0.799529247399431,1.07132363163395,0.705789743431384,2.40724100067505,0.730336388246517,0,1.00337708206016,0.315543124386369,0.203974470572744,1.30905207102113,2.1161073620616,1.11598505450025,3.23522940041993,0.432626562123789,0.504665699340316,0.327796715891087,0.253397002022874,0.509944148709909,1.3360870263278,1.01084389488329,1.25353769646188,0.227336094654718,1.07185652062471,0,0.724030971033267,0.639701945702943,1.42838658878244,0.193766729508018,0.124149428591716,0.33639558774184,0.318235791390825,1.41482032270754,1.52401723527873,1.71116650542641,0.336760265072938,0.286888821570705,1.33064142618405,0.569822880276821,0.106727345877715,0,0.0898252021065869,2.34640942403454,0.122241444182866,0.406896178315738,0,0.201273793591026,0 | |||
|short_description=p6@RAB10 | |||
}} |
Revision as of 02:10, 21 January 2014
Short description: | p6@RAB10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_RAB10_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_AF091032_5end |
EntrezGene: | RAB10 |
HGNC: | 9759 |
UniProt: | Q9UL28 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.41e-16 | 48 |
phagocyte | 1.41e-16 | 48 |
monopoietic cell | 3.33e-14 | 59 |
monocyte | 3.33e-14 | 59 |
monoblast | 3.33e-14 | 59 |
promonocyte | 3.33e-14 | 59 |
macrophage dendritic cell progenitor | 3.35e-14 | 61 |
classical monocyte | 3.02e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.02e-13 | 42 |
myeloid leukocyte | 3.45e-12 | 72 |
granulocyte monocyte progenitor cell | 6.93e-12 | 67 |
myeloid lineage restricted progenitor cell | 1.72e-11 | 66 |
myeloid cell | 5.05e-08 | 108 |
common myeloid progenitor | 5.05e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.31e-14 | 76 |
bone element | 2.49e-12 | 82 |
hematopoietic system | 1.32e-11 | 98 |
blood island | 1.32e-11 | 98 |
immune system | 4.22e-11 | 93 |
skeletal element | 9.13e-11 | 90 |
hemolymphoid system | 2.34e-10 | 108 |
skeletal system | 6.21e-09 | 100 |