FFCP PHASE1:Hg19::chr2:5831423..5831440,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-173bp_to_ENST00000453678_5end | |||
|description=CAGE_peak_1_at_ENST00000453678_5end | |||
|id=chr2:5831423..5831440,- | |||
|ontology_enrichment_celltype=CL:0002319!1.89e-24!25;CL:0000133!1.04e-20!59;CL:0000221!2.96e-15!71;CL:0000095!3.05e-15!17;CL:0000123!3.05e-15!17;CL:0000333!2.78e-14!41;CL:0000243!7.40e-13!15;CL:0000125!7.40e-13!15;CL:0000030!7.40e-13!15;CL:0000339!7.40e-13!15;CL:0000055!2.13e-12!180;CL:0000047!4.83e-11!8;CL:0000128!8.00e-10!7;CL:0000126!8.00e-10!7;CL:0000127!8.00e-10!7;CL:0002453!8.00e-10!7;CL:0000540!1.25e-08!6;CL:0000031!1.25e-08!6;CL:0000404!1.25e-08!6;CL:0000188!1.69e-07!9;CL:0002322!3.09e-07!5;CL:1000507!3.30e-07!12;CL:1000494!3.30e-07!12;CL:0002321!6.18e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0002319;3.14e-31;25!CL:0000095;3.00e-22;17!CL:0000243;2.56e-17;15!CL:0000125;2.56e-17;15!CL:0000128;5.41e-17;7!CL:0000126;5.41e-17;7!CL:0000127;5.41e-17;7!CL:0002603;3.82e-11;3!CL:0002605;1.55e-10;3!CL:0000333;1.94e-10;5!CL:0000064;3.29e-10;3!CL:0000067;3.29e-10;3!CL:0005012;3.29e-10;3!CL:0002304;3.29e-10;3!CL:0002321;1.05e-09;15!CL:0000123;1.26e-07;2!CL:0000242;1.26e-07;2!CL:0000669;2.10e-07;4!CL:1000507;2.13e-07;10!CL:1000494;2.13e-07;10!CL:0000047;2.33e-07;2!CL:0002575;4.92e-07;2!CL:1000449;7.72e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,2.93e-31,25;CL:0000133,1.96e-29,59;CL:0000221,4.92e-23,72;CL:0000095,3.14e-22,17;CL:0000123,3.14e-22,17;CL:0000333,6.06e-20,41;CL:0000243,3.05e-17,15;CL:0000125,3.05e-17,15;CL:0000030,3.05e-17,15;CL:0000339,3.05e-17,15;CL:0000128,4.32e-17,7;CL:0000126,4.32e-17,7;CL:0000127,4.32e-17,7;CL:0002453,4.32e-17,7;CL:0002603,3.04e-11,3;CL:0002605,1.49e-10,3;CL:0000047,1.66e-10,8;CL:0000064,3.21e-10,3;CL:0000067,3.21e-10,3;CL:0005012,3.21e-10,3;CL:0002304,3.21e-10,3;CL:0000242,9.87e-08,2;CL:0000669,1.76e-07,4;CL:1000507,1.93e-07,10;CL:1000494,1.93e-07,10;CL:0002575,5.77e-07,2;CL:1000449,6.96e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000339;2.56e-17;15!CL:0000133;1.00e-13;59!CL:0000221;1.13e-09;72!UBERON:0006238;4.92e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:169;1.06e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,1.08e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0000073!3.91e-24!94;UBERON:0001016!3.91e-24!94;UBERON:0005743!8.97e-23!86;UBERON:0000924!1.24e-21!173;UBERON:0006601!1.24e-21!173;UBERON:0001017!3.13e-21!82;UBERON:0004121!2.51e-20!169;UBERON:0002346!3.86e-16!90;UBERON:0000033!6.79e-15!123;UBERON:0003075!7.53e-15!86;UBERON:0007284!7.53e-15!86;UBERON:0000955!1.33e-14!69;UBERON:0006238!1.33e-14!69;UBERON:0000153!3.64e-14!129;UBERON:0007811!3.64e-14!129;UBERON:0003056!7.18e-13!61;UBERON:0000970!6.02e-11!20;UBERON:0002104!3.23e-10!21;UBERON:0000019!3.55e-10!19;UBERON:0000047!3.55e-10!19;UBERON:0004088!3.55e-10!19;UBERON:0003072!3.55e-10!19;UBERON:0003071!3.55e-10!19;UBERON:0004128!3.55e-10!19;UBERON:0000119!7.25e-10!312;UBERON:0002616!1.97e-09!59;UBERON:0000475!3.75e-09!365;UBERON:0000020!5.86e-09!23;UBERON:0001049!5.95e-09!57;UBERON:0005068!5.95e-09!57;UBERON:0006241!5.95e-09!57;UBERON:0007135!5.95e-09!57;UBERON:0001456!7.88e-09!21;UBERON:0000483!1.07e-08!309;UBERON:0002200!1.33e-08!11;UBERON:0006876!1.33e-08!11;UBERON:0001032!2.07e-08!24;UBERON:0004456!2.07e-08!24;UBERON:0007625!2.24e-08!11;UBERON:0002203!3.10e-08!6;UBERON:0001768!3.10e-08!6;UBERON:0001801!1.07e-07!14;UBERON:0000922!2.22e-07!612;UBERON:0000481!2.55e-07!347;UBERON:0009773!3.30e-07!12;UBERON:0001231!3.30e-07!12;UBERON:0004810!3.30e-07!12;UBERON:0000064!7.03e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;1.94e-10;5!UBERON:0002410;1.94e-10;5!UBERON:0001778;3.29e-10;3!UBERON:0001775;3.29e-10;3!UBERON:0006876;6.85e-10;11!UBERON:0002203;6.42e-09;6!UBERON:0001768;6.42e-09;6!UBERON:0002200;6.42e-09;6!UBERON:0000488;9.34e-08;4!UBERON:0004211;2.13e-07;10!UBERON:0009773;2.13e-07;10!UBERON:0001231;2.13e-07;10!UBERON:0004810;2.13e-07;10!UBERON:0006555;7.72e-07;15!UBERON:0004819;7.72e-07;15!UBERON:0001285;7.72e-07;15!UBERON:0007684;7.72e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.31e-17,89;UBERON:0004121,5.61e-14,171;UBERON:0000924,5.61e-14,171;UBERON:0006601,5.61e-14,171;UBERON:0001017,1.85e-13,81;UBERON:0000013,2.00e-10,5;UBERON:0002410,2.00e-10,5;UBERON:0001778,3.21e-10,3;UBERON:0001775,3.21e-10,3;UBERON:0006876,9.71e-10,11;UBERON:0000955,2.97e-09,68;UBERON:0006238,2.97e-09,68;UBERON:0002203,5.94e-09,6;UBERON:0001768,5.94e-09,6;UBERON:0002200,5.94e-09,6;UBERON:0000488,9.17e-08,4;UBERON:0004810,1.93e-07,10;UBERON:0004211,6.96e-07,15;UBERON:0009773,6.96e-07,15;UBERON:0001231,6.96e-07,15;UBERON:0001285,6.96e-07,15;UBERON:0007684,6.96e-07,15;UBERON:0004208,6.96e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,2.79120467188971,1.31064823278103,0.527533956456907,0,0,0,0,0,0,4.55547914884115,3.87601313364081,2.82109249330279,2.57612388417951,3.01123735160345,1.63205431473244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,3.02511414925017,1.99556457716308,1.22968699970376,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0.622422070799533,0,0.163461903113459,0.302714855289863,0,0,0,0,0,0.704606991862589,0.323745888736263,0.561803226808994,0,0.245668634623536,0,0,0,0,0,1.17835279767846,0.875829639103749,0,0,0,0,0.113432183160021,0,0,0,0,0.103052529238439,0,0,0,0.0974370051611986,0,0,0,0,0.10075209822764,0.169560592310488,0,0,0,0.731842236777572,2.12047629314376,2.44007280025989,2.07322110030741,0.756962552626885,2.91981887260664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.4115740113314,0,0,0,0,0,0,0.686271241194102,0,0,0,0,0.325808305310325,0,2.88662684050547,0.811512834825538,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0.763976851116555,0,0,0,0,0,1.90622843387113,1.74384027533312,0.5867062865676,0,0,0,0,0,1.28603687131071,0,1.5985330740966,0,0,0.823240336780769,0,0,0.791951872933429,0.602878754119172,0,0,0,0,0,0.479249710983165,0,0,0.289562613335158,0.61642896765115,0.716243852959582,0,0,0,0,1.52456774533478,2.60279707715243,4.63973287666617,3.51784157202132,3.82763250991898,0,0,0,0.24538298343828,1.00034104211935,0,0,0,0,0,0,0,0,0,0.184369168541703,0,1.76221041716467,1.02943027143257,0,0,0,0.909382714338778,1.66435439510497,1.5119514666484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35359883872224,0.308061348417659,1.56869953835371,1.46139224653261,0.316654886678627,0,0.340187410553031,0,0,1.89662506280697,0.501689773854853,0,0,1.34324852833307,0,0,0.512900250232778,0.656029291399411,0,0,0,0,0,0,0,0.48335359146061,0.770243085573222,0.307007349452259,0.413509717453592,0.537101224341368,0.870100163485371,1.27839941124151,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0,1.116475108079,1.2655176988749,0,0,0,0.318203247925937,0,0.179872457583315,0.274537029736055,0.235624804691373,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0.281695602532241,0,0,0,0,0,0,0.379473173765715,3.84928192269481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.3307196799782,0,0,0,0,0,0,0,0.296964680832639,0,0,0.140669416410513,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,3.99227596002388,0,0,0,0,0,0,1.72371686620732,0,0,0,1.92954301800653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.702793337176017,0,0,0,0,0,2.44858209304392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0.0633107959558787,0,0,0,0,0,0,2.05913997434357,0,0,0,1.63085047288337,1.35983700206033,0.305994652908965,0.866851769704557,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0.335917362433631,0,0,0,0,0,0,0,0,0.136203406111576,0.803765742325096,0.962776056180637,0.83088067605837,0,0,0.121499113316049,0,0,0.524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.110929051536852,0.372578417648301,0.138348634936231,1.12482367165896,0,0,0,4.21501415226193,1.7390523433299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428883182749851,0.521988583930423,0,0,0,0,0.308801447160972,0,0,0,0,0.76872455576384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.44102850604101,1.40172254815686,1.25812753484717,1.85656384926424,0.509197589862076,0.212574920101683,0.123935764259002,0,0,0.23658523500376,3.20228299314188,0,0,0.578063025868136,0,0,0,3.78107544332577,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0.994581110581374,0,0,0,0,0,0,0,0,0,0.0634158101939068,4.92277328116398,0,0,0,0,0,0,0,0,0,0,0,0.203909198930495,0,0,0,0,0.471346769748006,0,0,0,0,0.0714765441766563,2.05417695252545,0,0.869291361512897,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.4794432940146,0,0,0,0,0,0.989464650708862,0,0,0.218559560503957,0,0,0,0.196308467114945,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0.631086248772738,0,5.23620828408453,0,0,0,0,0.883164973845552,1.31118686356435,0,0.101988829741982,0,0,0,0.227336094654718,0,0,0.310298987585686,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0,0,1.9307228228694,0,0,0,0,0,0,0 | |||
|short_description=p1@ENST00000453678 | |||
}} |
Revision as of 01:33, 21 January 2014
Short description: | p1@ENST00000453678 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000453678_5end |
Coexpression cluster: | NA |
Association with transcript: | -173bp_to_ENST00000453678_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 2.93e-31 | 25 |
neurectodermal cell | 1.96e-29 | 59 |
ectodermal cell | 4.92e-23 | 72 |
neuron associated cell | 3.14e-22 | 17 |
neuron associated cell (sensu Vertebrata) | 3.14e-22 | 17 |
migratory neural crest cell | 6.06e-20 | 41 |
glial cell (sensu Vertebrata) | 3.05e-17 | 15 |
glial cell | 3.05e-17 | 15 |
glioblast | 3.05e-17 | 15 |
glioblast (sensu Vertebrata) | 3.05e-17 | 15 |
oligodendrocyte | 4.32e-17 | 7 |
macroglial cell | 4.32e-17 | 7 |
astrocyte | 4.32e-17 | 7 |
oligodendrocyte precursor cell | 4.32e-17 | 7 |
astrocyte of the cerebellum | 3.04e-11 | 3 |
astrocyte of the cerebral cortex | 1.49e-10 | 3 |
neuronal stem cell | 1.66e-10 | 8 |
ciliated cell | 3.21e-10 | 3 |
ciliated epithelial cell | 3.21e-10 | 3 |
multi-ciliated epithelial cell | 3.21e-10 | 3 |
non-pigmented ciliary epithelial cell | 3.21e-10 | 3 |
Merkel cell | 9.87e-08 | 2 |
pericyte cell | 1.76e-07 | 4 |
kidney tubule cell | 1.93e-07 | 10 |
nephron tubule epithelial cell | 1.93e-07 | 10 |
central nervous system pericyte | 5.77e-07 | 2 |
epithelial cell of nephron | 6.96e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
nervous system | 3.31e-17 | 89 |
ectoderm-derived structure | 5.61e-14 | 171 |
ectoderm | 5.61e-14 | 171 |
presumptive ectoderm | 5.61e-14 | 171 |
central nervous system | 1.85e-13 | 81 |
sympathetic nervous system | 2.00e-10 | 5 |
autonomic nervous system | 2.00e-10 | 5 |
ciliary epithelium | 3.21e-10 | 3 |
ciliary body | 3.21e-10 | 3 |
vasculature of organ | 9.71e-10 | 11 |
brain | 2.97e-09 | 68 |
future brain | 2.97e-09 | 68 |
vasculature of eye | 5.94e-09 | 6 |
uvea | 5.94e-09 | 6 |
vasculature of head | 5.94e-09 | 6 |
atypical epithelium | 9.17e-08 | 4 |
nephron tubule epithelium | 1.93e-07 | 10 |
nephron epithelium | 6.96e-07 | 15 |
renal tubule | 6.96e-07 | 15 |
nephron tubule | 6.96e-07 | 15 |
nephron | 6.96e-07 | 15 |
uriniferous tubule | 6.96e-07 | 15 |
nephrogenic mesenchyme | 6.96e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 1.08e-08 | 6 |