FFCP PHASE1:Hg19::chr19:52264423..52264439,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2358 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3827 | |||
|TSSclassifier=strong | |||
|UniProt=P25090 | |||
|association_with_transcript=-13bp_to_NM_001005738,uc002pxr.2,uc002pxs.3_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_1_at_FPR2_5end | |||
|id=chr19:52264423..52264439,+ | |||
|ontology_enrichment_celltype=CL:0000766!3.39e-44!76;CL:0002057!1.24e-41!42;CL:0002194!6.58e-41!63;CL:0000576!6.58e-41!63;CL:0000040!6.58e-41!63;CL:0000559!6.58e-41!63;CL:0002009!1.73e-40!65;CL:0000860!1.36e-37!45;CL:0000839!9.29e-36!70;CL:0000557!3.80e-35!71;CL:0000763!1.97e-34!112;CL:0000049!1.97e-34!112;CL:0000738!5.49e-34!140;CL:0000037!5.42e-32!172;CL:0000566!5.42e-32!172;CL:0002087!1.37e-31!119;CL:0002032!7.29e-30!165;CL:0000837!7.29e-30!165;CL:0000988!2.45e-28!182;CL:0002031!1.37e-27!124;CL:0000094!1.61e-09!8;CL:0002393!5.59e-09!9;CL:0002397!5.59e-09!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.98e-46;33!CL:0002057;4.98e-46;33!CL:0000473;4.46e-40;39!CL:0000234;4.46e-40;39!CL:0000576;1.06e-36;48!CL:0000766;2.09e-27;69!CL:0000763;1.82e-14;100!CL:0000094;1.34e-13;8!CL:0002087;8.24e-12;104!CL:0000738;1.72e-10;136!CL:0000081;2.36e-09;11!CL:0002393;3.72e-09;6!CL:0002397;3.72e-09;6!CL:0000988;1.35e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.02e-63,48;CL:0000234,2.02e-63,48;CL:0000860,2.20e-62,42;CL:0002057,2.20e-62,42;CL:0000766,5.27e-58,72;CL:0002194,1.58e-51,59;CL:0000576,1.58e-51,59;CL:0000040,1.58e-51,59;CL:0000559,1.58e-51,59;CL:0002009,2.53e-49,61;CL:0000839,2.12e-44,66;CL:0000557,1.67e-43,67;CL:0000738,3.86e-42,136;CL:0000763,5.64e-42,108;CL:0000049,5.64e-42,108;CL:0002087,8.98e-38,115;CL:0000037,2.38e-37,168;CL:0002032,5.93e-35,161;CL:0000837,5.93e-35,161;CL:0000988,2.94e-34,177;CL:0002031,2.99e-31,120;CL:0000094,1.34e-13,8;CL:0002393,8.76e-13,9;CL:0002397,8.76e-13,9;CL:0000081,2.37e-09,11;CL:0000134,1.49e-07,354;CL:0002320,4.67e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;1.58e-44;42!CL:0000049;5.18e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.26e-39!102;UBERON:0003061!1.26e-39!102;UBERON:0002193!6.59e-36!112;UBERON:0007023!1.27e-34!115;UBERON:0002371!1.03e-29!80;UBERON:0001474!4.15e-26!86;UBERON:0002405!1.19e-25!115;UBERON:0004765!8.32e-20!101;UBERON:0001434!8.32e-20!101;UBERON:0003081!3.09e-11!216;UBERON:0000178!6.63e-10!15;UBERON:0000179!6.63e-10!15;UBERON:0000463!6.63e-10!15;UBERON:0001049!5.14e-09!57;UBERON:0005068!5.14e-09!57;UBERON:0006241!5.14e-09!57;UBERON:0007135!5.14e-09!57;UBERON:0002204!1.83e-08!167;UBERON:0000479!2.48e-07!787;UBERON:0002616!5.38e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.46e-15;15!UBERON:0000179;5.46e-15;15!UBERON:0000463;5.46e-15;15!UBERON:0002390;3.82e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.10e-51,98;UBERON:0003061,6.10e-51,98;UBERON:0002193,3.78e-46,108;UBERON:0002371,1.66e-36,76;UBERON:0002405,4.45e-33,93;UBERON:0001474,1.06e-32,82;UBERON:0004765,1.96e-28,90;UBERON:0001434,4.38e-24,100;UBERON:0003081,1.64e-17,203;UBERON:0000178,5.52e-15,15;UBERON:0000179,5.52e-15,15;UBERON:0000463,5.52e-15,15;UBERON:0002204,1.75e-09,167;UBERON:0007023,3.00e-09,114;UBERON:0000926,3.77e-07,315;UBERON:0004120,3.77e-07,315;UBERON:0006603,3.77e-07,315;UBERON:0002384,4.05e-07,371 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.3412067971073,7.67658796194425,8.66970290570026,0,0,0,0,0,0.293600439334847,8.30993112797816,12.8348446380891,6.51032612147556,1.34349284543955,0.971680998056939,0.515151135268373,56.5599148852507,15.4929136912412,21.5899814457156,86.4636017289147,20.5583944010913,29.7318116059299,107.02156994384,28.1776777182011,64.7961309894723,105.147432624669,22.5919639254339,40.6279459783025,102.215590371634,34.3861749072886,46.0683143112423,149.368939477,40.7579864386639,47.310947309129,83.1225276470525,40.8900498124345,54.1305433176522,133.786459007777,35.1778839308507,73.4930253814778,54.5209603607133,21.9022825736485,41.7002581833824,118.65830251614,39.0374294146819,75.3180482109305,22.3930603490658,19.346991296819,17.1920089316868,56.72595872898,68.3304862428854,36.9668849403284,13.3955989558387,10.94041724595,7.85455861187926,0,7.09980194640771,0.889509253863555,10.2415253415962,2.00197993518006,3.4485146397269,4.62731410949403,3.81621501814146,0.569212969109448,0.587237189370939,0,2.64342657158052,5.04457706683382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22995790026868,0,0,3.76437797694432,0.383959833463255,9.99445812418767,12.7859716103769,1.64225599384209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16115474571226,0,0,0.324547393654683,0,0.132957960518865,0.715471872916026,1.14398982156026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,616.732353600776,825.971962635933,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96565443335525,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.93947209739836,8.89216207529103,8.62060741274624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,1.00451418286425,0,0,0,0,0,0,0,0,0.197030760201927,0,0.256686072559497,0,0,0,0,0,453.149249488045,353.010521860749,866.128423081314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.82334486205528,15.5314224589404,3.30855429190677,0,0,0,0,0,0,0,0.511707249066704,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,13.2922905025562,0,0,0,0,0,0,0,0,0,0.214840489736547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0.974853958525138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34060455107157,0,14.3098577180704,0,0,0,0,274.529156594604,265.329110878404,271.721708282076,219.887928747539,255.867333859613,348.878641421682,262.455278497724,205.419420660216,0,0,0,0,0,0,0.159426272728822,0.199579371432817,13.2138705391333,0.211673582723883,0,0,0,31.6493389461507,0,0,0,0,1.27753871307098,61.8309620560377,0.921722292925374,0.223676107892416,1.00109485027145,26.5727809746775,0,0,0,0,0,0,2.93016358543788,0,14.4876399560722,0,0,0.296964680832639,0,1.9882952955326,0.422008249231538,0,0,0,0.597743964753209,0.276283915531148,0,0,0,0,0,0,2.55786185113436,0.887790650732402,98.1880678622453,0,0,0.927680981618513,1.99613798001194,0,0,0,0,0,0,0,0,0,1.77148277162768,0.60298219312704,0,0.442317039724898,0.295547618953547,0,0,0,0.307801034015188,0.113942055847001,0.23056390438806,0,0,0.957003479195758,0,0,0,0.470940769185074,0,0,0,0,0,0,0,0,0,0,0,0.884575645033392,0,0,0,0,0.741412462787447,0,0,0,0,0,0,0,0,9.35161378501622,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.678923115418936,0,1.12990370390266,0.959293472527256,0.19871461170299,0.0633107959558787,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,1.50595916781192,0,0,0,0.558564802544508,0,0,1.59743200399193,1.71690419254628,4.24025769139558,3.09043973438941,0.360299883542404,0,0,0,0,0,0,2.38568906942791,0.681017030557878,0.321506296930038,0.137539436597234,0.415440338029185,0.899895566206002,0,0.242998226632099,0,1.10327990218877,2.51782023047991,0,0,0,0,4.63464379255802,0,0,0,0,0,0.164185041498678,0,1.24643300672138,1.46552233678082,6.62534444561107,0.387848869084652,0.79339561045614,0,0,19.7556713250235,10.0610755263786,7.04206394090232,24.3121350687856,0,0,0,0.544017803369474,0.2506898940227,0.306345576763462,0,0,0,0.488105059607853,1.3771002377715,2.86704597845036,0.554645257684261,1.67660287941735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,2.66729324235352,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321146125482298,1.41696576325585,0.478901577171454,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,1.42899623863589,0.40341013740704,0,0,0,0,0.405225507710368,0,0.413373593002368,0.19024743058172,0,0,0.496211178389294,0,0,0,0,0.606965604236632,1.13831095675649,3.54809480650555,0,25.8946894250502,0.475788130837822,0,0,0,0.313972371402056,0.785577949580009,0,0,0.431855182437243,0,1.1436247068265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0.821302454849976,1.1598144313382,0,0,0,0,0,0,0,0.926089897295336,0,0,0.490296643507811,0,0.785233868459781,2.0793248022896,0.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| |||
|short_description=p1@FPR2 | |||
}} |
Revision as of 00:51, 21 January 2014
Short description: | p1@FPR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FPR2_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -13bp_to_NM_001005738, uc002pxr.2, uc002pxs.3_5end |
EntrezGene: | FPR2 |
HGNC: | 3827 |
UniProt: | P25090 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.02e-63 | 48 |
phagocyte | 2.02e-63 | 48 |
classical monocyte | 2.20e-62 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.20e-62 | 42 |
myeloid leukocyte | 5.27e-58 | 72 |
monopoietic cell | 1.58e-51 | 59 |
monocyte | 1.58e-51 | 59 |
monoblast | 1.58e-51 | 59 |
promonocyte | 1.58e-51 | 59 |
macrophage dendritic cell progenitor | 2.53e-49 | 61 |
myeloid lineage restricted progenitor cell | 2.12e-44 | 66 |
granulocyte monocyte progenitor cell | 1.67e-43 | 67 |
leukocyte | 3.86e-42 | 136 |
myeloid cell | 5.64e-42 | 108 |
common myeloid progenitor | 5.64e-42 | 108 |
nongranular leukocyte | 8.98e-38 | 115 |
hematopoietic stem cell | 2.38e-37 | 168 |
hematopoietic oligopotent progenitor cell | 5.93e-35 | 161 |
hematopoietic multipotent progenitor cell | 5.93e-35 | 161 |
hematopoietic cell | 2.94e-34 | 177 |
hematopoietic lineage restricted progenitor cell | 2.99e-31 | 120 |
granulocyte | 1.34e-13 | 8 |
intermediate monocyte | 8.76e-13 | 9 |
CD14-positive, CD16-positive monocyte | 8.76e-13 | 9 |
blood cell | 2.37e-09 | 11 |
mesenchymal cell | 1.49e-07 | 354 |
connective tissue cell | 4.67e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.10e-51 | 98 |
blood island | 6.10e-51 | 98 |
hemolymphoid system | 3.78e-46 | 108 |
bone marrow | 1.66e-36 | 76 |
immune system | 4.45e-33 | 93 |
bone element | 1.06e-32 | 82 |
skeletal element | 1.96e-28 | 90 |
skeletal system | 4.38e-24 | 100 |
lateral plate mesoderm | 1.64e-17 | 203 |
blood | 5.52e-15 | 15 |
haemolymphatic fluid | 5.52e-15 | 15 |
organism substance | 5.52e-15 | 15 |
musculoskeletal system | 1.75e-09 | 167 |
adult organism | 3.00e-09 | 114 |
mesoderm | 3.77e-07 | 315 |
mesoderm-derived structure | 3.77e-07 | 315 |
presumptive mesoderm | 3.77e-07 | 315 |
connective tissue | 4.05e-07 | 371 |