FFCP PHASE1:Hg19::chr19:49468991..49469047,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2512 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=3999 | |||
|TSSclassifier=strong | |||
|UniProt=P02792 | |||
|association_with_transcript=0bp_to_M12938_5end | |||
|description=CAGE_peak_2_at_FTL_5end | |||
|id=chr19:49468991..49469047,+ | |||
|ontology_enrichment_celltype=CL:0000766!1.20e-26!76;CL:0002009!5.99e-26!65;CL:0002194!1.31e-25!63;CL:0000576!1.31e-25!63;CL:0000040!1.31e-25!63;CL:0000559!1.31e-25!63;CL:0002057!6.53e-24!42;CL:0000557!6.05e-23!71;CL:0000839!1.46e-21!70;CL:0000763!3.22e-21!112;CL:0000049!3.22e-21!112;CL:0000860!4.32e-21!45;CL:0000048!9.74e-17!430;CL:0000034!1.06e-15!444;CL:0000723!1.41e-15!436;CL:0002320!1.16e-14!365;CL:0000134!1.44e-13!358;CL:0002371!7.99e-13!591;CL:0000738!2.16e-12!140;CL:0002032!2.85e-11!165;CL:0000837!2.85e-11!165;CL:0000037!2.89e-11!172;CL:0000566!2.89e-11!172;CL:0002087!7.15e-11!119;CL:0000219!3.00e-10!390;CL:0000988!4.00e-10!182;CL:0000144!6.24e-10!625;CL:0000548!9.97e-10!679;CL:0000004!9.97e-10!679;CL:0000255!9.97e-10!679;CL:0002031!1.31e-09!124;CL:0000012!3.39e-09!682;CL:0000003!5.69e-08!722;CL:0000063!3.08e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.13e-28;33!CL:0002057;9.13e-28;33!CL:0000473;1.40e-27;39!CL:0000234;1.40e-27;39!CL:0000576;1.27e-23;48!CL:0000766;1.53e-16;69!CL:0000763;2.46e-09;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,4.35e-41,59;CL:0000576,4.35e-41,59;CL:0000040,4.35e-41,59;CL:0000559,4.35e-41,59;CL:0002009,9.44e-41,61;CL:0000766,8.37e-40,72;CL:0000473,1.24e-39,48;CL:0000234,1.24e-39,48;CL:0000557,6.63e-35,67;CL:0000839,3.60e-34,66;CL:0000860,4.33e-34,42;CL:0002057,4.33e-34,42;CL:0000763,3.32e-28,108;CL:0000049,3.32e-28,108;CL:0000048,2.22e-20,427;CL:0000738,7.54e-20,136;CL:0002087,8.82e-20,115;CL:0000723,2.52e-19,433;CL:0000034,5.63e-19,441;CL:0002031,1.99e-17,120;CL:0002320,2.28e-17,361;CL:0002032,4.05e-17,161;CL:0000837,4.05e-17,161;CL:0000037,4.55e-17,168;CL:0000134,1.76e-16,354;CL:0000988,5.64e-16,177;CL:0000219,5.73e-14,386;CL:0000235,7.08e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;6.19e-25;42!CL:0000049;2.03e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.53e-22!80;UBERON:0001474!1.26e-20!86;UBERON:0004765!8.93e-19!101;UBERON:0001434!8.93e-19!101;UBERON:0002405!5.81e-18!115;UBERON:0002390!3.56e-17!102;UBERON:0003061!3.56e-17!102;UBERON:0002204!2.85e-16!167;UBERON:0002193!1.11e-15!112;UBERON:0002384!1.10e-13!375;UBERON:0003081!5.50e-10!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.23e-34,76;UBERON:0001474,1.73e-31,82;UBERON:0004765,5.79e-31,90;UBERON:0001434,4.62e-28,100;UBERON:0002390,2.12e-27,98;UBERON:0003061,2.12e-27,98;UBERON:0002405,1.02e-26,93;UBERON:0002204,9.23e-26,167;UBERON:0002193,5.15e-24,108;UBERON:0003081,3.02e-17,203;UBERON:0002384,1.23e-16,371;UBERON:0000926,7.44e-15,315;UBERON:0004120,7.44e-15,315;UBERON:0006603,7.44e-15,315 | |||
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| |||
|short_description=p2@FTL | |||
}} |
Revision as of 00:24, 21 January 2014
Short description: | p2@FTL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FTL_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_M12938_5end |
EntrezGene: | FTL |
HGNC: | 3999 |
UniProt: | P02792 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 4.35e-41 | 59 |
monocyte | 4.35e-41 | 59 |
monoblast | 4.35e-41 | 59 |
promonocyte | 4.35e-41 | 59 |
macrophage dendritic cell progenitor | 9.44e-41 | 61 |
myeloid leukocyte | 8.37e-40 | 72 |
defensive cell | 1.24e-39 | 48 |
phagocyte | 1.24e-39 | 48 |
granulocyte monocyte progenitor cell | 6.63e-35 | 67 |
myeloid lineage restricted progenitor cell | 3.60e-34 | 66 |
classical monocyte | 4.33e-34 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.33e-34 | 42 |
myeloid cell | 3.32e-28 | 108 |
common myeloid progenitor | 3.32e-28 | 108 |
multi fate stem cell | 2.22e-20 | 427 |
leukocyte | 7.54e-20 | 136 |
nongranular leukocyte | 8.82e-20 | 115 |
somatic stem cell | 2.52e-19 | 433 |
stem cell | 5.63e-19 | 441 |
hematopoietic lineage restricted progenitor cell | 1.99e-17 | 120 |
connective tissue cell | 2.28e-17 | 361 |
hematopoietic oligopotent progenitor cell | 4.05e-17 | 161 |
hematopoietic multipotent progenitor cell | 4.05e-17 | 161 |
hematopoietic stem cell | 4.55e-17 | 168 |
mesenchymal cell | 1.76e-16 | 354 |
hematopoietic cell | 5.64e-16 | 177 |
motile cell | 5.73e-14 | 386 |
macrophage | 7.08e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.23e-34 | 76 |
bone element | 1.73e-31 | 82 |
skeletal element | 5.79e-31 | 90 |
skeletal system | 4.62e-28 | 100 |
hematopoietic system | 2.12e-27 | 98 |
blood island | 2.12e-27 | 98 |
immune system | 1.02e-26 | 93 |
musculoskeletal system | 9.23e-26 | 167 |
hemolymphoid system | 5.15e-24 | 108 |
lateral plate mesoderm | 3.02e-17 | 203 |
connective tissue | 1.23e-16 | 371 |
mesoderm | 7.44e-15 | 315 |
mesoderm-derived structure | 7.44e-15 | 315 |
presumptive mesoderm | 7.44e-15 | 315 |