FFCP PHASE1:Hg19::chr19:42363917..42364010,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6223 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10402 | |||
|TSSclassifier=strong | |||
|UniProt=P39019,B0ZBD0 | |||
|association_with_transcript=0bp_to_ENST00000221975,NM_001022,uc002ort.2_5end | |||
|description=CAGE_peak_4_at_RPS19_5end | |||
|id=chr19:42363917..42364010,+ | |||
|ontology_enrichment_celltype=CL:0000548!1.74e-19!679;CL:0000004!1.74e-19!679;CL:0000255!1.74e-19!679;CL:0000012!4.96e-19!682;CL:0000144!8.83e-15!625;CL:0002371!4.99e-14!591;CL:0000003!2.05e-13!722;CL:0000055!2.88e-11!180;CL:0002321!3.70e-09!248;CL:0000220!7.57e-09!246;CL:0000222!1.28e-07!119;CL:0002078!1.38e-07!44;CL:0000115!3.36e-07!35;CL:0000133!7.42e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000115;8.15e-07;36!CL:1000449;8.30e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,7.17e-09,250;CL:0000222,7.98e-09,121;CL:0000115,2.27e-08,36;CL:0002078,3.44e-08,45;CL:1000449,5.78e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;8.30e-07;15!UBERON:0004819;8.30e-07;15!UBERON:0001285;8.30e-07;15!UBERON:0007684;8.30e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,5.78e-07,15;UBERON:0009773,5.78e-07,15;UBERON:0001231,5.78e-07,15;UBERON:0001285,5.78e-07,15;UBERON:0007684,5.78e-07,15;UBERON:0004208,5.78e-07,15;UBERON:0007503,6.16e-07,78 | |||
|phase1_expression=1.2717486548939,0.856402095563933,0.704772020479856,3.00219895059391,1.78784437770915,1.74467704820074,0,1.89515962028049,0.522371256399677,2.7030733015166,2.79120467188971,1.09220686065086,2.11013582582763,0.618831764800233,0.662794751455832,1.34465029290355,1.20538905604795,0,2.43966399395253,3.57051068422685,3.06001036866379,2.5076377718247,1.43117993565528,2.32686522623903,2.00868223351684,2.36881557818649,3.69452652524756,2.51874500203774,0.786728553697808,0,0.619264493264304,1.83884244895785,2.71085326900425,0,1.47187681102573,1.27952309238679,0.587200878669695,0,0.200544447470142,0.217010870715852,0.447830948479849,0.32389366601898,0.257575567634187,0.581592955118259,0.755751887377619,0,1.62700325833979,0.411167888021826,0.309706370895104,0.863077176966451,0.512321413058201,0,0.689491361473237,0,1.35426486594342,1.12945403725563,1.36453075028923,0.674170453335254,0,1.28371610830437,0.639337125799041,0.329851300186716,1.19678194572979,0.852449501065388,0.290209238628584,0.56738522469114,1.24564449799115,0.251248665256743,0.521482918420201,0.434377689410233,0.605399502633369,0.736555271975129,0.632924774881769,0.422510572623884,0.425208599930087,0.209658645508376,0.112328631146495,0,0,0.855038231223746,0.19891667719909,0.182664153764634,1.75996244461323,0.546138611262131,0,0.426730222566507,0.800791974072025,1.14950487990897,0.661044872784862,0,0,0,0.382273228125229,0,0,1.58030450865046,0,0,0.205601498999509,0.668745981562712,0.977766799900771,0.473447805734733,0,0.891283655081389,0.589211814949674,1.10766947291811,0.812411591295047,0.640456598628376,0.780356085359269,0.328875809207352,0.552700035571697,0.579606171470105,0,0.535081656179426,0,0.906474741580529,1.14966148080576,0.68725489096526,0.506039384039006,0.637130828648193,1.30216690771284,4.75226022224187,1.35517607169996,0.639933055772092,0,0.947109008176067,0,0.201606743224732,1.06976078313403,0.289648807765598,0,1.34140171940727,1.40648818027883,0.722878304769133,0.50133791063589,0.289693037921647,0.795285947051099,0.973269740605272,1.70162670895322,1.99556457716308,2.19586964232815,0.982343066232845,0,1.11235332835329,0.324547393654683,0,0.132957960518865,0.476981248610684,0.571994910780128,0.371457501329565,0.993812036833525,1.72046919021225,2.77712401286075,1.13061588384802,1.67799774483962,2.47606237746061,2.92592953151535,0.258416759169329,1.06729878806013,0.66944122552934,3.62546385398232,0.760272105718513,1.22031028774085,4.04429388380456,1.62028389576352,2.32179293538607,1.12264686313085,1.91439516821648,4.5994991239765,1.89853131913626,1.83201743930407,0,0,0.872188104285069,1.98788780678127,1.51956613997496,0.397227542439656,0.573673241497627,0.709336764396714,1.12135520028461,2.1349799145941,1.97334038733728,0.311211035399766,0.538842688278752,1.30769522490767,0.908144565869588,0.576175924479999,0.468642863667593,1.24864030732128,2.2818872861778,0.896692083310806,2.11382097558777,2.10434827678571,3.37081936085396,0.408308342509787,1.96534907698829,0.413303124703062,2.37600571456411,1.48360157567134,3.64064544775211,1.43723628363248,1.68336113954066,1.62654075833553,1.6623846929051,2.19488810440419,0.612975591598039,1.35214253015937,1.70148274740032,1.07633781413317,2.13557388818567,1.48352330811693,1.80054657650641,1.44273540933814,0.515281080091258,0.37223371266318,1.0126579934476,1.55899208257918,0.504867548488229,1.19664868234989,1.45481451136931,1.06502877754984,0.906768884048762,2.03472710772585,1.35282597214308,0.545492241181669,0.860413786167011,1.21973706129595,2.25300606146525,2.09149097165133,0.932949495138334,4.03713361401005,1.45990943630332,0,0.643240938192885,4.14404764057442,0.928735856063958,1.44375896333917,2.48444280083672,2.02301628093722,1.92808823906786,2.64705534557745,1.74303555273925,2.37270619111097,1.07865046528132,3.13954344200554,3.46272441251751,1.4763109092493,1.40241773803446,0.8231480226628,5.88034845542168,0,0,0.590789906681404,1.32438929824395,0.614942192715568,1.71567810298526,0.658501712451753,0,0.804231779293047,0.185176890317059,0.977424915930974,3.11980435583874,0,1.04337364477569,1.05667824812239,1.44366447761074,1.85194205030644,1.90254152234598,7.11183958163348,4.29243081047436,0,0.234004265139238,0,0,0.671928512795438,0.283550194484773,0.53735113621709,0.581267877027924,2.30029607499127,1.97065295158377,0.44024217006613,0,0.432359860250884,0.25248486685276,0.63497894292169,0.763976851116555,2.34434894420094,1.71072446022705,0.925447434329912,2.10240140490742,0,2.13049060256185,3.92364061949952,3.74025257686845,0.646358578788889,0,3.381211010224,1.59562869950922,1.04007436911366,3.60090323966999,5.67396528093113,1.5985330740966,0.57191197463259,1.08524321078289,4.93944202068461,0.325736184293735,0.355391948742546,7.91951872933429,0,0,0.499864955910285,0,0,0,1.19812427745791,1.14861935834114,1.42636905040718,1.44781306667579,1.43833425785268,1.61154866915906,0.448340575974109,0.591092280605782,0.215627574859517,1.02674429023799,1.77866236955724,2.60279707715243,2.3198664383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| |||
|short_description=p4@RPS19 | |||
}} |
Revision as of 23:31, 20 January 2014
Short description: | p4@RPS19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RPS19_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000221975, NM_001022, uc002ort.2_5end |
EntrezGene: | RPS19 |
HGNC: | 10402 |
UniProt: | P39019B0ZBD0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 7.17e-09 | 250 |
mesodermal cell | 7.98e-09 | 121 |
endothelial cell | 2.27e-08 | 36 |
meso-epithelial cell | 3.44e-08 | 45 |
epithelial cell of nephron | 5.78e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
nephron epithelium | 5.78e-07 | 15 |
renal tubule | 5.78e-07 | 15 |
nephron tubule | 5.78e-07 | 15 |
nephron | 5.78e-07 | 15 |
uriniferous tubule | 5.78e-07 | 15 |
nephrogenic mesenchyme | 5.78e-07 | 15 |
epithelial vesicle | 6.16e-07 | 78 |