FFCP PHASE1:Hg19::chr19:41859791..41859804,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7040 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11766 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=11bp_to_uc002oqh.1_5end | |||
|description=CAGE_peak_3_at_TGFB1_5end | |||
|id=chr19:41859791..41859804,- | |||
|ontology_enrichment_celltype=CL:0002371!6.69e-29!591;CL:0000144!9.62e-26!625;CL:0000003!4.49e-24!722;CL:0000738!3.62e-22!140;CL:0000048!1.88e-21!430;CL:0000723!3.23e-21!436;CL:0002057!1.41e-20!42;CL:0002320!1.80e-20!365;CL:0000134!8.60e-20!358;CL:0000034!1.18e-19!444;CL:0000012!1.84e-18!682;CL:0000988!2.66e-18!182;CL:0000548!4.04e-18!679;CL:0000004!4.04e-18!679;CL:0000255!4.04e-18!679;CL:0002087!6.82e-18!119;CL:0000219!7.40e-18!390;CL:0000766!9.04e-18!76;CL:0000037!2.22e-17!172;CL:0000566!2.22e-17!172;CL:0000860!8.06e-17!45;CL:0002031!1.25e-16!124;CL:0002032!3.82e-16!165;CL:0000837!3.82e-16!165;CL:0000557!2.37e-13!71;CL:0002009!4.10e-13!65;CL:0002194!9.06e-13!63;CL:0000576!9.06e-13!63;CL:0000040!9.06e-13!63;CL:0000559!9.06e-13!63;CL:0000839!4.67e-12!70;CL:0000063!1.59e-11!578;CL:0000763!1.67e-11!112;CL:0000049!1.67e-11!112;CL:0000791!1.20e-07!18;CL:0000789!1.20e-07!18;CL:0002420!1.20e-07!18;CL:0002419!1.20e-07!18;CL:0000790!1.20e-07!18;CL:0000094!8.15e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.66e-16;33!CL:0002057;3.66e-16;33!CL:0000473;4.20e-12;39!CL:0000234;4.20e-12;39!CL:0000576;2.49e-11;48!CL:0000766;3.06e-10;69!CL:0000791;1.07e-07;18!CL:0000789;1.07e-07;18!CL:0002419;1.07e-07;18!CL:0002087;1.09e-07;104!CL:0000094;7.23e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.62e-24,136;CL:0000048,8.97e-23,427;CL:0000723,1.27e-22,433;CL:0002320,4.73e-22,361;CL:0000134,2.36e-21,354;CL:0000034,5.94e-21,441;CL:0000766,8.95e-21,72;CL:0000860,1.21e-20,42;CL:0002057,1.21e-20,42;CL:0002087,3.84e-20,115;CL:0000988,4.18e-20,177;CL:0000219,2.14e-19,386;CL:0000037,5.21e-19,168;CL:0000473,6.49e-19,48;CL:0000234,6.49e-19,48;CL:0002031,1.20e-18,120;CL:0002032,9.82e-18,161;CL:0000837,9.82e-18,161;CL:0000557,6.22e-16,67;CL:0002009,8.09e-16,61;CL:0002194,1.76e-15,59;CL:0000576,1.76e-15,59;CL:0000040,1.76e-15,59;CL:0000559,1.76e-15,59;CL:0000839,2.12e-14,66;CL:0000763,4.16e-13,108;CL:0000049,4.16e-13,108;CL:0000791,1.14e-07,18;CL:0000789,1.14e-07,18;CL:0002420,1.14e-07,18;CL:0002419,1.14e-07,18;CL:0000790,1.14e-07,18;CL:0000094,7.81e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;4.03e-15;42!CL:0000790;1.07e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!8.73e-20!375;UBERON:0003081!1.41e-17!216;UBERON:0002390!9.47e-16!102;UBERON:0003061!9.47e-16!102;UBERON:0002193!6.45e-15!112;UBERON:0001474!1.61e-12!86;UBERON:0002371!5.57e-12!80;UBERON:0002204!1.02e-11!167;UBERON:0004765!1.18e-10!101;UBERON:0001434!1.18e-10!101;UBERON:0002405!9.93e-09!115;UBERON:0004535!7.73e-07!110 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.69e-21,371;UBERON:0003081,4.65e-20,203;UBERON:0002390,4.90e-18,98;UBERON:0003061,4.90e-18,98;UBERON:0002193,5.08e-17,108;UBERON:0001474,1.04e-14,82;UBERON:0002371,3.39e-14,76;UBERON:0002405,1.43e-13,93;UBERON:0004765,4.73e-13,90;UBERON:0002204,1.39e-12,167;UBERON:0000926,1.67e-12,315;UBERON:0004120,1.67e-12,315;UBERON:0006603,1.67e-12,315;UBERON:0001434,5.00e-12,100;UBERON:0004535,6.32e-07,109 | |||
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| |||
|short_description=p3@TGFB1 | |||
}} |
Revision as of 23:28, 20 January 2014
Short description: | p3@TGFB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TGFB1_5end |
Coexpression cluster: | NA |
Association with transcript: | 11bp_to_uc002oqh.1_5end |
EntrezGene: | TGFB1 |
HGNC: | 11766 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.69e-21 | 371 |
lateral plate mesoderm | 4.65e-20 | 203 |
hematopoietic system | 4.90e-18 | 98 |
blood island | 4.90e-18 | 98 |
hemolymphoid system | 5.08e-17 | 108 |
bone element | 1.04e-14 | 82 |
bone marrow | 3.39e-14 | 76 |
immune system | 1.43e-13 | 93 |
skeletal element | 4.73e-13 | 90 |
musculoskeletal system | 1.39e-12 | 167 |
mesoderm | 1.67e-12 | 315 |
mesoderm-derived structure | 1.67e-12 | 315 |
presumptive mesoderm | 1.67e-12 | 315 |
skeletal system | 5.00e-12 | 100 |
cardiovascular system | 6.32e-07 | 109 |