FFCP PHASE1:Hg19::chr19:40146547..40146563,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=148003 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=40039 | |||
|TSSclassifier=strong | |||
|UniProt=A8MUM7 | |||
|association_with_transcript=0bp_to_ENST00000392051,NM_001190441_5end | |||
|coexpression_cluster_id=C84 | |||
|description=CAGE_peak_1_at_LGALS16_5end | |||
|id=chr19:40146547..40146563,+ | |||
|ontology_enrichment_celltype=CL:0000039!1.92e-70!7;CL:0000586!1.92e-70!7 | |||
|ontology_enrichment_celltype_v019=CL:0000039;4.63e-37;7!CL:0000586;4.63e-37;7!CL:0000083;1.82e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,4.35e-37,7;CL:0000586,4.35e-37,7;CL:0000083,1.82e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0003124;2.05e-29;1 | |||
|ontology_enrichment_disease=DOID:3095!1.15e-22!22;DOID:2994!1.15e-22!22;DOID:1799!1.88e-21!1;DOID:10165!1.88e-21!1;DOID:1798!1.88e-21!1 | |||
|ontology_enrichment_disease_v019=DOID:1799;9.99e-30;1!DOID:10165;9.99e-30;1!DOID:1798;9.99e-30;1!DOID:3095;2.30e-12;22!DOID:2994;2.30e-12;22!DOID:1793;1.82e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,9.99e-30,1;DOID:10165,9.99e-30,1;DOID:1798,9.99e-30,1;DOID:3095,2.26e-12,22;DOID:2994,2.26e-12,22;DOID:1793,1.82e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0000473!9.35e-11!8;UBERON:0003135!4.49e-08!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;2.18e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,2.26e-08,4;UBERON:0004340,2.26e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13345112812495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7887322147588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.84184199214926,3.68006342080066,76.3791024611717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4762677792569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.193285325855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0,0.36757959813938,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@LGALS16 | |||
}} |
Revision as of 23:16, 20 January 2014
Short description: | p1@LGALS16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | No |
Description: | CAGE_peak_1_at_LGALS16_5end |
Coexpression cluster: | C84_choriocarcinoma_pancreatic_Wilms_Mallassezderived_thymus_salivary_colon |
Association with transcript: | 0bp_to_ENST00000392051, NM_001190441_5end |
EntrezGene: | LGALS16 |
HGNC: | 40039 |
UniProt: | A8MUM7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 4.35e-37 | 7 |
germ cell | 4.35e-37 | 7 |
epithelial cell of pancreas | 1.82e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 9.99e-30 | 1 |
endocrine pancreas cancer | 9.99e-30 | 1 |
pancreatic endocrine carcinoma | 9.99e-30 | 1 |
germ cell and embryonal cancer | 2.26e-12 | 22 |
germ cell cancer | 2.26e-12 | 22 |
pancreatic cancer | 1.82e-08 | 4 |