FFCP PHASE1:Hg19::chr19:39787043..39787048,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=282618 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18363 | |||
|TSSclassifier=weak | |||
|UniProt=Q8IU54 | |||
|association_with_transcript=78bp_to_ENST00000333625,NM_172140,uc002okv.2_5end | |||
|coexpression_cluster_id=C19 | |||
|description=CAGE_peak_1_at_IL29_5end | |||
|id=chr19:39787043..39787048,+ | |||
|ontology_enrichment_celltype=CL:0002541!1.17e-11!3;CL:0002097!9.52e-09!2 | |||
|ontology_enrichment_celltype_v019=CL:0000473;4.07e-15;39!CL:0000234;4.07e-15;39!CL:0000860;7.07e-15;33!CL:0002057;7.07e-15;33!CL:0000771;3.43e-12;2!CL:0000766;1.24e-08;69!CL:0002541;1.46e-08;3!CL:0000576;2.41e-08;48!CL:0000763;2.27e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.45e-16,48;CL:0000234,1.45e-16,48;CL:0000766,1.13e-14,72;CL:0000860,2.50e-13,42;CL:0002057,2.50e-13,42;CL:0002194,2.90e-13,59;CL:0000576,2.90e-13,59;CL:0000040,2.90e-13,59;CL:0000559,2.90e-13,59;CL:0002009,7.76e-13,61;CL:0000771,3.24e-12,2;CL:0000839,7.03e-12,66;CL:0000557,1.05e-11,67;CL:0000763,8.80e-10,108;CL:0000049,8.80e-10,108;CL:0002541,1.51e-08,3;CL:0000738,9.72e-08,136;CL:0002087,7.83e-07,115 | |||
|ontology_enrichment_development_v019=CL:0002057;8.74e-12;42 | |||
|ontology_enrichment_disease=DOID:305!8.07e-11!106;DOID:162!7.95e-08!235;DOID:14566!1.62e-07!239;DOID:0050687!9.42e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000476!1.17e-11!3;UBERON:0000920!1.17e-11!3;UBERON:0001737!1.21e-09!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.46e-08;3!UBERON:0000920;1.46e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.46e-10,76;UBERON:0001474,1.38e-09,82;UBERON:0004765,9.75e-09,90;UBERON:0000920,1.51e-08,3;UBERON:0002405,1.86e-08,93;UBERON:0002390,5.03e-08,98;UBERON:0003061,5.03e-08,98;UBERON:0001434,7.28e-08,100;UBERON:0002193,2.80e-07,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61188314765726,2.26954089876456,0.622822248995575,0,0,0,4.23779651843358,9.94349617166425,8.22802207346299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0.241011029883482,0.110293972732394,0,0,0.134831308160164,0.392442930250692,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.08118903205952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0.32681539055697,0,0,0,0,0,0,0.31900115973192,0.0915975934018623,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,101.618631524197,0,0.664653872707185,0,0,0,0,0,0,0.489961987071888,0,0,0,0,0.0730893170861856,0,0,0,0,0,0,0,0.586654148204409,0,0,0,0,0,0,0.288109595976299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0.328370082997356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.770479321629213,0.428883182749851,0,0,0,0.97894681802587,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0.301925687133347,0,0,0,0,0,0,0,0,0,0,0,0.199882311849858,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@IL29 | |||
}} |
Revision as of 23:11, 20 January 2014
Short description: | p1@IL29 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_IL29_5end |
Coexpression cluster: | C19_embryonic_testis_cord_chronic_CD14_NK_mesothelioma |
Association with transcript: | 78bp_to_ENST00000333625, NM_172140, uc002okv.2_5end |
EntrezGene: | IL29 |
HGNC: | 18363 |
UniProt: | Q8IU54 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.45e-16 | 48 |
phagocyte | 1.45e-16 | 48 |
myeloid leukocyte | 1.13e-14 | 72 |
classical monocyte | 2.50e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.50e-13 | 42 |
monopoietic cell | 2.90e-13 | 59 |
monocyte | 2.90e-13 | 59 |
monoblast | 2.90e-13 | 59 |
promonocyte | 2.90e-13 | 59 |
macrophage dendritic cell progenitor | 7.76e-13 | 61 |
eosinophil | 3.24e-12 | 2 |
myeloid lineage restricted progenitor cell | 7.03e-12 | 66 |
granulocyte monocyte progenitor cell | 1.05e-11 | 67 |
myeloid cell | 8.80e-10 | 108 |
common myeloid progenitor | 8.80e-10 | 108 |
chorionic membrane mesenchymal stem cell | 1.51e-08 | 3 |
leukocyte | 9.72e-08 | 136 |
nongranular leukocyte | 7.83e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.46e-10 | 76 |
bone element | 1.38e-09 | 82 |
skeletal element | 9.75e-09 | 90 |
egg chorion | 1.51e-08 | 3 |
immune system | 1.86e-08 | 93 |
hematopoietic system | 5.03e-08 | 98 |
blood island | 5.03e-08 | 98 |
skeletal system | 7.28e-08 | 100 |
hemolymphoid system | 2.80e-07 | 108 |